LOC122326770 (LOC107662685)


Basic Information

Item Value
gene id LOC122326770
gene name LOC107662685
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29427286 ~ 29427802 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247510.1
AACCTGACTTTGACGGCTCTGGCTCCCAGATTCCCTGTCTTCCAAACCAGTGACTACCAGCTGTGGTTCCAGATAAATCTGGTTGTAGTGCTGGCCAGCTTCCGTCCTGAGGTTCTAGTGTTGATCCCCGCCAACCTCACCTGTGACGCTTACGATGCAATATTGAAAGGCCTGGAGAACGCTTTGGCACTTCTCCCATCTCAAGCTGCAGTGGAGCTGACGTCAAGCATCGATGAACTTCTACAGTCACCACCAAATGGCTGCACGCCTCCTCGCCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107662685

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247510.1 True 278 lncRNA 0.54 3 29427286 29427802

Neighbor

gene id symbol gene type direction distance location
mslnb LOC107566818,LOC107574164,LOC107707761 coding downstream 24908 29366477 ~ 29402378 (-)
LOC122359579 LOC107680745,LOC107740699,LOC107680747,LOC107662714,LOC107758392 coding downstream 86715 29335596 ~ 29340571 (-)
LOC122359260 LOC107680745,LOC107740699,LOC107680747,LOC107758392,LOC107662714,LOC107574731 coding downstream 100748 29320391 ~ 29326538 (-)
LOC122357818 LOC107678317,LOC107575749,LOC107719897 coding downstream 137793 29284247 ~ 29289493 (-)
LOC122360529 NA coding downstream 150582 29273251 ~ 29276704 (-)
LOC122349539 LOC107662685 coding upstream 42542 29470344 ~ 29472287 (-)
LOC122349546 LOC107678949 coding upstream 44498 29472300 ~ 29476081 (-)
zmp:0000001082 LOC107572597,LOC107755319,LOC107678952 coding upstream 74703 29502505 ~ 29518876 (-)
wfikkn1 wfikkn1,LOC107678954,LOC107758378 coding upstream 92092 29519894 ~ 29523243 (-)
ears2 ears2 coding upstream 162161 29589963 ~ 29594827 (-)
LOC122327126 NA non-coding downstream 117 29426833 ~ 29427169 (-)
G7637 NA non-coding downstream 79657 29347222 ~ 29347629 (-)
G7629 NA non-coding downstream 109060 29317581 ~ 29318226 (-)
G7624 NA non-coding downstream 133876 29292626 ~ 29293410 (-)
G7620 NA non-coding downstream 135943 29290761 ~ 29291343 (-)
LOC122326869 NA non-coding upstream 2614 29430416 ~ 29430757 (-)
LOC122326670 LOC107662685 non-coding upstream 26578 29454380 ~ 29454905 (-)
LOC122326309 NA non-coding upstream 27332 29455134 ~ 29455875 (-)
LOC122326490 LOC107662685 non-coding upstream 28190 29455992 ~ 29456539 (-)
LOC122326391 NA non-coding upstream 34578 29462380 ~ 29463055 (-)
G7569 gtf3c1,LOC107678316 other downstream 116688 29301807 ~ 29310598 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 274741 29067982 ~ 29152545 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other downstream 295194 29049743 ~ 29132092 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other downstream 314552 29101686 ~ 29112734 (-)
LOC122324333 NA other downstream 482668 28942988 ~ 28944618 (-)
G7655 LOC107662685 other upstream 24957 29452759 ~ 29475388 (-)
G7816 NA other upstream 764399 30192201 ~ 30197848 (-)
G7868 NA other upstream 1202432 30630234 ~ 30630505 (-)
G8009 NA other upstream 1515696 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 2104267 31532069 ~ 31537416 (-)

Expression


Co-expression Network