LOC122345298


Basic Information

Item Value
gene id LOC122345298
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20155664 ~ 20157523 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250988.1
CCCCCGCCCCAGTACAACACCTCTGCACCTATGAACTATACACCAGTATTGAACAGTGCTCCTCCTGGTCCTGAACTCCCGCCCACTGCAGCCCTGCTCACACCTCACCCTGAGTCGCAGCCGTCTATTTCTATGGATATCCTTAACTCCAGTGACACTGGTGTCCAGTTTGACATTAACAAAGGAAAGTCTTCAGGCAGCAACTTTCTGTAGTTGCTCCAAAATCCTGAATTATCAGTGCAAGAAGTATAAAAACACCTGATTAGATTCATTCAACATCTCAGCCTTAAAAAAAGAACCAATAGGATCTTAAATAAAACTTGTTTTAGTGTCTTATGAGATAAgcagatgatatatatataaatttatataaaaatgtactgtatctAGAATCTTAATGAAATTTTTACCTCAACACCATTAGTTATGGCCTACCTCCACCTTTCAGGCTAAAGAGGGTATATTCTATACTTTTGTGTAGAACTACATGTAATAAGCAGTTTTTTATTTGACTATTGTACACATCTATATgctatagatagatagttttaatgttttgccaGCTATATGCTTACCTCGGTCTTCTGAGAGATGTAGAGTTGtgcaacaacaacataaatctGTAACCtgagaaaactaaaatatacaatgttttttttttttacctgcttAAACCACAGCAATCTGATCATGTGAAAACATTACAGGATTTAtggatttattatttacttgaaTACATATAATGCATGTtactaaaaatgcatgcaagagaattgaaatgtattaaaatagtgTTTCAGGGAATTTTCTCAACTACCGTGCCAGTAGATGCATTTCTTTAGGACCTTTTCATAGTGCTTTTAGTTAGTTAGAACATAAAAAATGCTGCACATTTATACTTGAATCTTGATAATATGTGTGACATTTTGTATTATGATTTTTGTTGTAGCTAAATATAGATGCCTTACTTTAACTGCCCTTCATATTGCAATGTACACTGAGACAACAAAGGCCTACCattgttcttttaataaaatactgctATAAATTTCTGAACCAGGGTTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250988.1 True 1068 lncRNA 0.35 3 20155664 20157523

Neighbor

gene id symbol gene type direction distance location
wu:fc21g02 LOC107749811,LOC107679888,LOC107714230 coding downstream 1781 20148541 ~ 20153883 (-)
vps37c vps37c,LOC107749845,LOC107679880,LOC107551318,LOC107714235,LOC107556517 coding downstream 19113 20130165 ~ 20136551 (-)
LOC122345161 NA coding downstream 26980 20123390 ~ 20128684 (-)
tmem132a LOC107679886,LOC107749857,LOC107551241,LOC107556516,LOC107674183,LOC107552170 coding downstream 35220 20113304 ~ 20120444 (-)
trnae-cuc_4 NA coding downstream 42451 20113142 ~ 20113213 (-)
kdm2aa LOC107551394,LOC107674221,LOC107746404 coding upstream 16338 20173861 ~ 20190297 (-)
zgc:165520 zgc:165520,LOC107749989,LOC107679874,LOC107552638,LOC107746898,LOC107674222,LOC108262789,LOC108434798 coding upstream 34358 20191881 ~ 20195323 (-)
ndufs8a ndufs8a,ndufs8,LOC107679876,LOC107746464,LOC107674223,LOC108434795,LOC106602580 coding upstream 38647 20196170 ~ 20199495 (-)
tmem187 tmem187,LOC107749980,LOC107679875,LOC107674198,LOC107746454 coding upstream 50740 20208263 ~ 20209693 (-)
LOC122345237 NA coding upstream 59674 20217197 ~ 20218643 (-)
G4713 NA non-coding downstream 217263 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 218905 19936390 ~ 19936759 (-)
G4609 zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042 non-coding downstream 346033 19598210 ~ 19809631 (-)
G4615 NA non-coding downstream 523411 19631098 ~ 19632253 (-)
G4611 NA non-coding downstream 544149 19608383 ~ 19611515 (-)
G4870 NA non-coding upstream 42472 20199995 ~ 20265069 (-)
LOC122345304 NA non-coding upstream 107762 20265285 ~ 20266183 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 285429 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 302018 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 308639 20466162 ~ 20469015 (-)
si:dkey-9i23.16 NA other downstream 15085 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 616518 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2275247 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2390932 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2718957 17434717 ~ 17436707 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 131794 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 209606 20367129 ~ 20369111 (-)
G4958 NA other upstream 526319 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 748647 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1392094 21549617 ~ 21564077 (-)

Expression


Co-expression Network