LOC122348617


Basic Information

Item Value
gene id LOC122348617
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 465920 ~ 466854 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251348.1
TTGATTCATCTTCTAAACGCCTGTTAATGACGCGATTTTAGCGTTAgcataatattaacataaaatgtgtcGTGTATACGTTTATTTCTATCAGACGATTGAGAGAAAAGCGGAGCACGGTTGAGAGTGCATCTTCAACCAGTTACCATCAGGATTTTCCTTCCTTATATGTACATTAGACTGAGTTTCCTTGgccgggtttttttttttctcttcttcttggGTTTGTTCTGTGTGATGTCTTGCTGATGTTCAGCCACAGAATACAGTCCGCTTATCTGCGAATCGAGTGAAGTGTGAACCCTTCCTGGAGTGTGAATCGTCTCAACTGTGTGTAACGGAAAAGTTGGACTGGCGAGCCGCCCGTTAATCGGACCCTTTGAACAATCCTGTTGAAAGAACATCAAGGTTGAACATACTCGTCTTTGAATGACTGATTCtacatttattctgtttaatttgtaaaggttgcttattttatttttatttttgttttgctcattgttaaaatacaaatttcctTCAATTCTTACCTTAAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251348.1 True 539 lncRNA 0.38 2 465920 466854

Neighbor

gene id symbol gene type direction distance location
LOC122337612 cd38,LOC107568972,LOC107693813 coding downstream 101001 567855 ~ 592341 (+)
LOC122342042 LOC107746594,LOC107582328,LOC107686751 coding downstream 262217 729071 ~ 738922 (+)
LOC122341978 NA coding downstream 576329 1043183 ~ 1047811 (+)
ggact.3 NA coding downstream 576331 1043185 ~ 1045789 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding downstream 778309 1245163 ~ 1250334 (+)
G69 NA non-coding upstream 23723 441899 ~ 442197 (+)
G55 NA non-coding upstream 72021 393639 ~ 393899 (+)
G21 NA non-coding upstream 259570 206113 ~ 206350 (+)
G12 NA non-coding upstream 277772 187799 ~ 188148 (+)
G8 NA non-coding upstream 309574 155927 ~ 156346 (+)
LOC122348571 NA non-coding downstream 7185 474039 ~ 475160 (+)
G84 NA non-coding downstream 149310 616164 ~ 622738 (+)
G120 NA non-coding downstream 418664 885518 ~ 888363 (+)
G121 urp2,LOC107698908,LOC107555268,LOC107568775,LOC107718017,LOC107709382,LOC107653671 non-coding downstream 421810 888664 ~ 890056 (+)
G128 NA non-coding downstream 443635 910489 ~ 910697 (+)
LOC122341994 NA other upstream 16280 445940 ~ 449640 (+)
G10 NA other upstream 287720 177716 ~ 178200 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other downstream 652865 1119719 ~ 1120721 (+)
LOC122327253 NA other downstream 972186 1439040 ~ 1441666 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 1718967 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 2016786 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 2026718 2493572 ~ 2558527 (+)

Expression


Co-expression Network