LOC122351377


Basic Information

Item Value
gene id LOC122351377
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30097858 ~ 30099331 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251747.1
CTATTAAGAAAGCAATCTTCCAATCAGCTCAAAGTAGAAAGTTTTCTCAGCCGCTGGATGTCGCTGTACGAGCAGGTCTGCGTGTGAATATCAGCCGAAGAAAAGACAACAATGGCGGCGACCTGCTCGTGGAAGTTAGACAAAGAAACGGGGCAGGATGCGCTTATCGagttgcatacatttttcgcCAAGATTATATATTGATGACGGGAGAGTTGAACTGTTCACATAGTCTTCTAGAGTACATCCCAAAGATTCTCATCGGAGTTAAAGTATGGACTCTGCGGTGGCCaatccatgtgtgaaaaatcacatctaatgcTCTCTGAACCCTTCTTTCACAATTTGAGCCTGATAAATCCTGGCATTTTTATCTTGGAATATGCCCATGCAatcagggaagaaaaaaaaaaatgtatggaataaCATAACATTGTTGAACCTAGACCTGAGCAGCTGCAGCGATGCCAGATCATATCACCTGTTTGCTTCGTTAAATCGAGGTGGTGAACAGGCAGTGTATGTTCAGTGTCAATGTGACGACCCGAGTGGTGGCCACACATGAGTGTTTACCGGCGGTGTGTGGTGACGATTGTCAGGCCCAAGTACTGCAGCTTCCTGGTGTGACGAAAATTAAGAGTCCGGGTGGAAACTGGGAATTTAAGGGGGAATGGTTCTCCCTGGACATACCATTCAGAGAGATGGTCGGGGGCAAGAAAGGAAAAgtagctgattttattaattatatttggttgtctatttatgttgtttggttatgggttaGGTTCTCTGGGgatgatttagtgtttcttttaatttgtaatgggcccatctttctctttataagctgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251747.1 True 853 lncRNA 0.43 3 30097858 30099331

Neighbor

gene id symbol gene type direction distance location
LOC122349594 si:ch211-15j1.5,LOC107574374,LOC107576777,LOC107725412,LOC100334101 coding downstream 249478 29845625 ~ 29848380 (-)
LOC122357555 sh2d3a,LOC107685029,LOC107662707,LOC107560576 coding downstream 265710 29822257 ~ 29832148 (-)
LOC122324036 LOC107571898,LOC107659785,LOC107659779,LOC107576778,LOC107571412,LOC107574527,LOC107675009 coding downstream 286339 29809374 ~ 29811519 (-)
LOC122363120 LOC107722580 coding downstream 289275 29806587 ~ 29808583 (-)
LOC122358417 LOC107721946,LOC107662706,LOC107560594 coding downstream 291638 29799978 ~ 29806220 (-)
LOC122351861 primpol,LOC107656685,LOC107702393,LOC107750460 coding upstream 56378 30155709 ~ 30165350 (-)
LOC122350995 LOC107660492,LOC107757584,LOC107700259,LOC107548308 coding upstream 208632 30307963 ~ 30314051 (-)
LOC122350179 rhoh,LOC107548321,LOC107598269,LOC107757583 coding upstream 219750 30319081 ~ 30321983 (-)
LOC122350704 n4bp2,LOC107700258,LOC107598270,LOC107757609,LOC107598268 coding upstream 223988 30323319 ~ 30324865 (-)
trnar-ucg_101 NA coding upstream 258748 30358079 ~ 30358151 (-)
G7764 LOC107691293 non-coding downstream 59899 30032570 ~ 30037959 (-)
G7761 NA non-coding downstream 79301 30018283 ~ 30018557 (-)
G7755 NA non-coding downstream 182804 29914668 ~ 29915054 (-)
G7751 NA non-coding downstream 211186 29886280 ~ 29886672 (-)
G7675 cdc37 non-coding downstream 516731 29524195 ~ 29581127 (-)
G7806 NA non-coding upstream 8404 30107735 ~ 30184609 (-)
G7807 NA non-coding upstream 20519 30119850 ~ 30139122 (-)
LOC122351882 NA non-coding upstream 22958 30122289 ~ 30122700 (-)
G7813 NA non-coding upstream 70648 30169979 ~ 30177948 (-)
G7817 NA non-coding upstream 96659 30195990 ~ 30243324 (-)
G7648 LOC107662685,LOC107678949 other downstream 621520 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 622470 29452759 ~ 29475388 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 663645 29411107 ~ 29434213 (-)
G7569 gtf3c1,LOC107678316 other downstream 787260 29301807 ~ 29310598 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 945313 29067982 ~ 29152545 (-)
G7816 NA other upstream 92870 30192201 ~ 30197848 (-)
G7868 NA other upstream 530903 30630234 ~ 30630505 (-)
G8009 NA other upstream 844167 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 1432738 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 1450855 31550186 ~ 31554035 (-)

Expression


Co-expression Network