LOC122351897


Basic Information

Item Value
gene id LOC122351897
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8893620 ~ 8894562 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251812.1
AGACCATTGACACTGACAAGACCCTTATCACTGAGTCACTGAGATGGCGCAAACAAGATTTACATTAATCACACTTACGTgtgttttgttCTGTGAACATCAGAGAGCGTTTGGGACTGAAGTGAACATAAGAGTTAAATCAGGAGACAATATCACTCTGTACTGTGACTGTGTCATACCATTTGGATCACACGTTGTTTGGTGGAGAGACTGCTCACATGAGCATCAGCCTTCTCTTTTAatagatcatttaaatatattcaggtATATGTCatcacattttagttttatgattAACACATCCAGTAACTCCTATGATCTACGTATTTCAAACGTCAGTGTCTCTGATGAGGGAATATACTACTGTGGCAAAggaggaaagaaaataaatacaaataaagaggGCTTCGTAAATTCCAAATATGCATATGAATATGGAAACAGGACAACTTGTTTATCTGTCTTAGAACCAGTGTCTGCTGATGCGGGCGCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251812.1 True 495 lncRNA 0.38 3 8893620 8894562

Neighbor

gene id symbol gene type direction distance location
LOC122351065 NA coding downstream 3809 8887854 ~ 8889811 (-)
LOC122330624 NA coding downstream 8052 8884094 ~ 8885568 (-)
LOC122330473 NA coding downstream 15739 8875917 ~ 8877881 (-)
LOC122351709 NA coding downstream 25808 8866455 ~ 8867812 (-)
LOC122345778 dmd,LOC107692624 coding downstream 142048 8713630 ~ 8751572 (-)
LOC122345830 stim2a,LOC107656659,LOC107742493,LOC107563819,LOC107714208,LOC107562986,LOC107702263 coding upstream 19662 8914224 ~ 8922591 (-)
LOC122353120 rbpja,LOC107563830,LOC107742494,LOC107702317,LOC107562987 coding upstream 32459 8927021 ~ 8932564 (-)
LOC122353124 slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding upstream 42183 8936745 ~ 8942865 (-)
dlc1 dlc1,LOC107742489,LOC107656601,LOC107702327,LOC107562932,LOC107750042,LOC107565476 coding upstream 372973 9267535 ~ 9357022 (-)
LOC122347442 sgcz,LOC107656592,LOC107702328 coding upstream 512598 9407160 ~ 9630558 (-)
G2033 NA non-coding downstream 196219 8695872 ~ 8697401 (-)
G2016 NA non-coding downstream 222816 8669413 ~ 8670804 (-)
G2010 NA non-coding downstream 259223 8631464 ~ 8634397 (-)
LOC122351284 NA non-coding downstream 444996 8446548 ~ 8448624 (-)
G1868 NA non-coding downstream 726233 8138483 ~ 8167387 (-)
G2138 NA non-coding upstream 785334 9679896 ~ 9693438 (-)
G2174 LOC107747394,LOC107562929,LOC107721426 non-coding upstream 892752 9787314 ~ 9792467 (-)
G2286 NA non-coding upstream 1362088 10256650 ~ 10256887 (-)
G2292 fat1,fat1a,LOC107562748 non-coding upstream 1412408 10306970 ~ 10307238 (-)
G2293 NA non-coding upstream 1412942 10307504 ~ 10307715 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 95265 8779212 ~ 8798355 (-)
G1926 NA other downstream 285825 8556040 ~ 8607795 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other downstream 393408 8492144 ~ 8500212 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 1597791 7204004 ~ 7295829 (-)
G1642 NA other downstream 1723598 7125642 ~ 7170022 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 1462619 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 1840408 10734970 ~ 10799609 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other upstream 1912007 10806569 ~ 10814075 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 2059313 10953875 ~ 10981366 (-)
G2401 NA other upstream 2158592 11053154 ~ 11053941 (-)

Expression


Co-expression Network