LOC122353352


Basic Information

Item Value
gene id LOC122353352
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14620659 ~ 14624093 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251986.1
CAAAATCGTATCTgataggttaaaaaaaaaggtgcaggACCTGGAAGATACTTAACAGTGGGCAGAACTGCAGACAAACATCCAGGAGTTAAGCAGGCAGTCAGTCCAGAAGGCAGCTGAGAAGCACACTCAGGACCAATTGCTGaatattactgaaaatgtaatacCATTCATACCCACCAGTGGGAGGTAGACATCTTCAAATGCTGCTTCAGTGGGCATAAACATCTGCATCTGTGAGCTAACTCATCAAGGTCATGGACAGAGGAACTGCAGGGACAGTAGGGTCATCTTTGTGTCTTGTAATTGTTTTGTTACATCTCAGGGTTCTTTTAATCACTGAAATacaacagaaatgaaaaagcttttcttgcagttgtTAATGTTAATCATCAGCGCATTATTCTGGATTAAataatcagattccaaaaaaTCCTATGGTGTCATACATTTAGCTTTGAATATGccatttgcttttttctttaaatttttaaGGGGAAAAGCACCTCTCAAGCAATTAGatttgttttaactgtattgTTTAATCTAATGCAGAGATTAACAATTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251986.1 True 569 lncRNA 0.37 3 14620659 14624093

Neighbor

gene id symbol gene type direction distance location
si:dkey-30k22.5 LOC107695853,LOC107572196 coding upstream 13262 14605452 ~ 14607397 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding upstream 31895 14583650 ~ 14588764 (+)
LOC122346953 pcdh8 coding upstream 122345 14490784 ~ 14498314 (+)
tmem131l LOC107695518,LOC107745862,LOC107757619,LOC107700308 coding upstream 161641 14425254 ~ 14459018 (+)
mnd1 mnd1,LOC107700309 coding upstream 196514 14413027 ~ 14424145 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding downstream 11127 14635220 ~ 14643239 (+)
gucy1b1 gucy1b3,LOC107714654,LOC107757623 coding downstream 19920 14644013 ~ 14659537 (+)
fabp2 fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591 coding downstream 37565 14661658 ~ 14663101 (+)
mxd4 mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283 coding downstream 208610 14832703 ~ 14843409 (+)
ndufb6 ndufb6 coding downstream 223920 14848013 ~ 14849671 (+)
G3361 NA non-coding upstream 4742 14614933 ~ 14615917 (+)
G3326 fgg,LOC107745866,LOC107695488,LOC107714655,LOC107695473,LOC107700315,LOC107757622,LOC107572199 non-coding upstream 24112 14533015 ~ 14596547 (+)
G3324 NA non-coding upstream 88453 14531016 ~ 14532206 (+)
G3322 arfip1,LOC107695488,LOC107745866,LOC107700312 non-coding upstream 92188 14526617 ~ 14528471 (+)
G3282 NA non-coding upstream 138853 14481430 ~ 14481806 (+)
G3370 NA non-coding downstream 48221 14672314 ~ 14678944 (+)
G3374 NA non-coding downstream 57366 14681459 ~ 14774677 (+)
G3384 NA non-coding downstream 91907 14716000 ~ 14782839 (+)
G3391 gpank1,LOC107700266 non-coding downstream 121616 14745709 ~ 14809721 (+)
G3394 NA non-coding downstream 125223 14749316 ~ 14812143 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 7982 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 16771 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 139313 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 502226 14114431 ~ 14118433 (+)
slit2 slit2,LOC107700301,LOC107695646 other upstream 1034678 13516208 ~ 13585981 (+)
G3380 LOC107572695,LOC107695836 other downstream 99452 14723545 ~ 14791788 (+)
hemgn hemgn,trmo other downstream 406851 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 554510 15178603 ~ 15317624 (+)
G3599 NA other downstream 854005 15478098 ~ 15498680 (+)
G3647 NA other downstream 1029000 15653093 ~ 15653381 (+)

Expression


Co-expression Network