LOC122353681


Basic Information

Item Value
gene id LOC122353681
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 9796214 ~ 9796429 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252048.1
AAGACTATACTTTCAGGGATCATTTCTATAGTTACTAACTTGGAAATGTGTTTCGAAAGTGTTAGGCTTCCCAAACCACGATGATGAGCTTTGGTGCTCCTTTCTGAGCGTGAATCGGATGTAGAGTAATGATTCATTTCATACGCTTTATATCATTGATGAACGTTCCTCGTTGTTTCACCGCAGCGAGGAGGAAAGGGGCATGAGCAGAGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252048.1 True 216 snoRNA 0.43 1 9796214 9796429

Neighbor

gene id symbol gene type direction distance location
LOC122353673 NA coding upstream 800 9795199 ~ 9795414 (+)
micu3a LOC107747394,LOC107656542,LOC107562929,LOC107721426 coding upstream 2018 9771041 ~ 9794196 (+)
tusc3 tusc3,LOC107702329,LOC107731701,LOC107554394,LOC106602198,LOC107391086 coding upstream 101928 9633719 ~ 9694286 (+)
pi4k2b pi4k2b,LOC107742490,LOC107656613,LOC107702326,LOC107750041 coding upstream 532144 9252816 ~ 9264070 (+)
hgsnat hgsnat,LOC107565475,LOC107656620,LOC107702325,LOC107562920 coding upstream 544044 9237693 ~ 9252170 (+)
LOC122353686 NA coding downstream 1001 9797430 ~ 9797648 (+)
vps37a vps37a,LOC107656515,LOC107702331,LOC107747393,LOC107721427 coding downstream 3397 9799826 ~ 9805483 (+)
mtus1b mtus1b,LOC107747391,LOC107656488,LOC107562915,LOC107721423,LOC107702266 coding downstream 30674 9827103 ~ 9863686 (+)
pcm1 pcm1,LOC107747390,LOC107721421,LOC107554391,LOC107702267 coding downstream 69735 9866164 ~ 9888659 (+)
casp3a casp3,LOC107754122,LOC107656460,LOC107562747,LOC107746030,LOC107702336 coding downstream 540256 10336685 ~ 10341208 (+)
G2149 NA non-coding upstream 9053 9784218 ~ 9787161 (+)
LOC122353659 NA non-coding upstream 733605 9061961 ~ 9062609 (+)
LOC122352814 NA non-coding upstream 742741 9051908 ~ 9053473 (+)
LOC122352408 NA non-coding upstream 764391 9030823 ~ 9031823 (+)
G1979 NA non-coding upstream 1053693 8740832 ~ 8742521 (+)
G2219 NA non-coding downstream 282456 10078885 ~ 10079470 (+)
G2246 LOC107754123,LOC107562734,LOC107746042,LOC107702337,LOC107558191 non-coding downstream 576533 10372962 ~ 10373847 (+)
G2350 klhl2,LOC107591556,LOC107745059,LOC107702385,LOC107655955,LOC107750425,LOC107548347 non-coding downstream 1031256 10827685 ~ 10837245 (+)
G2352 NA non-coding downstream 1041196 10837625 ~ 10838465 (+)
G2354 NA non-coding downstream 1151690 10948119 ~ 10982967 (+)
G2125 NA other upstream 383777 9408405 ~ 9412437 (+)
G2063 NA other upstream 760614 9035086 ~ 9035600 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other upstream 1016050 8762139 ~ 8780164 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other upstream 1090341 8700440 ~ 8705873 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other upstream 1161815 8623158 ~ 8634399 (+)
G2230 NA other downstream 448728 10245157 ~ 10245578 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other downstream 460233 10256662 ~ 10335202 (+)
G2253 NA other downstream 600944 10397373 ~ 10398040 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other downstream 687211 10483640 ~ 10490084 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other downstream 1048527 10844956 ~ 10981356 (+)

Expression


Co-expression Network