LOC122353686


Basic Information

Item Value
gene id LOC122353686
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 9797430 ~ 9797648 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252049.1
AAGACTATACTTTCAGGGATCATTTCTATAGTGTTTAActtggaaatgtgttttgaaagtgTTAGGCCTCCCAAACCACGATGATGAGTATTGAAACTCTTTTCTGAGCGTGAGTCGGGTGCTGAGCAATGATTCCTTTCATAAGTTCTGTACCATTGATGAATGTTTCTTACTGCAGTTAACATGTGGTATGAAAGAAAAGGGTTTGATCAGAGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252049.1 True 219 snoRNA 0.38 1 9797430 9797648

Neighbor

gene id symbol gene type direction distance location
LOC122353681 NA coding upstream 1001 9796214 ~ 9796429 (+)
LOC122353673 NA coding upstream 2016 9795199 ~ 9795414 (+)
micu3a LOC107747394,LOC107656542,LOC107562929,LOC107721426 coding upstream 3234 9771041 ~ 9794196 (+)
tusc3 tusc3,LOC107702329,LOC107731701,LOC107554394,LOC106602198,LOC107391086 coding upstream 103144 9633719 ~ 9694286 (+)
pi4k2b pi4k2b,LOC107742490,LOC107656613,LOC107702326,LOC107750041 coding upstream 533360 9252816 ~ 9264070 (+)
vps37a vps37a,LOC107656515,LOC107702331,LOC107747393,LOC107721427 coding downstream 2178 9799826 ~ 9805483 (+)
mtus1b mtus1b,LOC107747391,LOC107656488,LOC107562915,LOC107721423,LOC107702266 coding downstream 29455 9827103 ~ 9863686 (+)
pcm1 pcm1,LOC107747390,LOC107721421,LOC107554391,LOC107702267 coding downstream 68516 9866164 ~ 9888659 (+)
casp3a casp3,LOC107754122,LOC107656460,LOC107562747,LOC107746030,LOC107702336 coding downstream 539037 10336685 ~ 10341208 (+)
helt helt,LOC107562737,LOC107656987,LOC107754167 coding downstream 568065 10365713 ~ 10367288 (+)
G2149 NA non-coding upstream 10269 9784218 ~ 9787161 (+)
LOC122353659 NA non-coding upstream 734821 9061961 ~ 9062609 (+)
LOC122352814 NA non-coding upstream 743957 9051908 ~ 9053473 (+)
LOC122352408 NA non-coding upstream 765607 9030823 ~ 9031823 (+)
G1979 NA non-coding upstream 1054909 8740832 ~ 8742521 (+)
G2219 NA non-coding downstream 281237 10078885 ~ 10079470 (+)
G2246 LOC107754123,LOC107562734,LOC107746042,LOC107702337,LOC107558191 non-coding downstream 575314 10372962 ~ 10373847 (+)
G2350 klhl2,LOC107591556,LOC107745059,LOC107702385,LOC107655955,LOC107750425,LOC107548347 non-coding downstream 1030037 10827685 ~ 10837245 (+)
G2352 NA non-coding downstream 1039977 10837625 ~ 10838465 (+)
G2354 NA non-coding downstream 1150471 10948119 ~ 10982967 (+)
G2125 NA other upstream 384993 9408405 ~ 9412437 (+)
G2063 NA other upstream 761830 9035086 ~ 9035600 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other upstream 1017266 8762139 ~ 8780164 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other upstream 1091557 8700440 ~ 8705873 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other upstream 1163031 8623158 ~ 8634399 (+)
G2230 NA other downstream 447509 10245157 ~ 10245578 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other downstream 459014 10256662 ~ 10335202 (+)
G2253 NA other downstream 599725 10397373 ~ 10398040 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other downstream 685992 10483640 ~ 10490084 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other downstream 1047308 10844956 ~ 10981356 (+)

Expression


Co-expression Network