LOC122353100 (golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803)



Basic Information


Item Value
gene id LOC122353100
gene name golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 40690 ~ 91321 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU108680
AAGAgtggaagaagaggaggaacgTCCCGGATGCATGTAAACATCCACGTCAACAGAAAGCGTATTAATGAAACAGTTATAGGGGCACGGAAGAGCGTAAATATAGGGATTATCGGCTCTGGCGGATGCACAGTTAAAAGACCGTTAAACGCGGTGGTGTTTTTAGGTTTGCGCGAACAATGACTTCCCTCACGCAGAGAAACTCGGGCCTGGTGCAGAGACGGACCGAGGCCTCGCGTAGCGCCGCCGCCGCGGAGAAGGAGAAGAGCCCCGGCGAGGATGAGCACGAGTCCCGCCGCGGAGAAGAGGACGAGGAAGACAAGGGAGACTCGAAGGAGACGCGGCTGACTCTGATGGAGGAGGTGCTGCTGCTCGGCCTGAAGGATCGAGAGGGTTACACGTCGTTCTGGAATGATTGCATATCTTCTGGACTGAGGGGCTGTATGCTGATTGAACTGGCCATAAGAGGACGCTTGCAGCTGGAGGCGTCCGGGATGAGGAGGAAAAGCCTGCTGACCAGAAAGGTGATCTGTAAATCGGACGCCCCCACCGGAGATATGCTGCTGGACGAGGCTCTGAAACACGTCAAAGAGACCCAGCCTCCGGAGACGGTCCAGAGCTGGATCGAGTTGTTAAGTGGTA
>TU108681
AAGAgtggaagaagaggaggaacgTCCCGGATGCATGTAAACATCCACGTCAACAGAAAGCGTATTAATGAAACAGTTATAGGGGCACGGAAGAGCGTAAATATAGGGATTATCGGCTCTGGCGGATGCACAGTTAAAAGACCGTTAAACGCGGTGGTGTTTTTAGGTTTGCGCGAACAATGACTTCCCTCACGCAGAGAAACTCGGGCCTGGTGCAGAGACGGACCGAGGCCTCGCGTAGCGCCGCCGCCGCGGAGAAGGAGAAGAGCCCCGGCGAGGATGAGCACGAGTCCCGCCGCGGAGAAGAGGACGAGGAAGACAAGGGAGACTCGAAGGAGACGCGGCTGACTCTGATGGAGGAGGTGCTGCTGCTCGGCCTGAAGGATCGAGAGGGTTACACGTCGTTCTGGAATGATTGCATATCTTCTGGACTGAGGGGCTGTATGCTGATTGAACTGGCCATAAGAGGACGCTTGCAGCTGGAGGCGTCCGGGATGAGGAGGAAAAGCCTGCTGACCAGAAAGGTGATCTGTAAATCGGACGCCCCCACCGGAGATATGCTGCTGGACGAGGCTCTGAAACACGTCAAAGAGACCCAGCCTCCGGAGACGGTCCAGAGCTGGATCGAGTTGTTAAGTGGAGAAACCTG
>XM_043250954.1
CGTCCGCCATATTGAATAAGGAAATAAGAgtggaagaagaggaggaacgTCCCGGATGCATGTAAACATCCACGTCAACAGAAAGCGTATTAATGAAACAGTTATAGGGGCACGGAAGAGCGTAAATATAGGGATTATCGGCTCTGGCGGATGCACAGTTAAAAGACCGTTAAACGCGGTGGTGTTTTTAGGTTTGCGCGAACAATGACTTCCCTCACGCAGAGAAACTCGGGCCTGGTGCAGAGACGGACCGAGGCCTCGCGTAGCGCCGCCGCCGCGGAGAAGGAGAAGAGCCCCGGCGAGGATGAGCACGAGTCCCGCCGCGGAGAAGAGGACGAGGAAGACAAGGGAGACTCGAAGGAGACGCGGCTGACTCTGATGGAGGAGGTGCTGCTGCTCGGCCTGAAGGATCGAGAGGGTTACACGTCGTTCTGGAATGATTGCATATCTTCTGGACTGAGGGGCTGTATGCTGATTGAACTGGCCATAAGAGGACGCTTGCAGCTGGAGGCGTCCGGGATGAGGAGGAAAAGCCTGCTGACCAGAAAGGTGATCTGTAAATCGGACGCCCCCACCGGAGATATGCTGCTGGACGAGGCTCTGAAACACGTCAAAGAGACCCAGCCTCCGGAGACGGTCCAGAGCTGGATCGAGTTGTTAAGTGGTGAGACATGGAACCCGTTGAAGCTTCACTATCAGCTGCGTAACGTCCGAGAGCGCCTGGCTAAGAACCTCGTAGAGAAGGGCGTCCTCACCACCGAGAAACAAAACTTTCTTCTGTTCGACATGACTACACACCCCCTcaccaataataatattaagcagcgcCTTATTAAGAAGGTGCAGGAGGCCGTACTGGACAAGTGGGTGAACGACCCCCACCGAATGGACAAGCGTCTTCTGGCCCTTATATTCCTCGCCCATTCCTCTGACGTACTAGAGAACGCGTTCGCCCCGCTGCTGGATGACCAGTACGATCTGGCCATGAAGAGAGTACGACAGCTGCTGGACCTGGAGCCCGAGGGCGAGAGCATGAAGAACAACACCAATGAGCTGCTGTGGGCTGTGGTGGCCGCCTTCACCAAATGAAGCGGCTTCTGTGCGATGAAATGTAAAACGGTCGGACTGGCAAAATCCGCTTTTGAGAATTGGTTGACCAGGTGTGTCAAAACGGGAGTCTCAAGTTTTCTTTCCTTGTAGATATTCCTTCCTCGCTAATCTCTCTGCAAGATCTATGATTGGGTTtctcgtttttgttttttttttttgataaggGGACCGCTTTATTTTGTCCTCGTCGAATGCAACTGGGTACCTTCCCACCGTGGAGCGTTGGAACGTTTACCATTTGCATCGCCACGCgaaatggcttttttaaaattcttttctCGTCTAGACAGCTGCGTCGGGTGCCTAATAGATTTTTTGCAATTGGAGAACTAAGCAAGCCCCTTGTTATCCGTTTTGTGCGTTTAATTAAAACTGATCAATCTGCGTGTGGTACGACTCAACAGATGCTAAAGAAATAAAGTACACTGCAGtgcatcatca

Function


symbol description
golph3 Enables enzyme binding activity and phosphatidylinositol-4-phosphate binding activity. Involved in several processes, including Golgi vesicle transport; cell adhesion molecule production; and cellular response to rapamycin. Located in Golgi apparatus subcompartment; cytosol; and mitochondrion.

NR:

description
PREDICTED: Golgi phosphoprotein 3-like

GO: NA

KEGG:

id description
K15620 GOLPH3, GPP34; golgi phosphoprotein 3

RNA


RNA id representative length rna type GC content exon number start site end site
TU108680 False 642 TUCP 0.56 3 90222 91296
TU108681 False 649 TUCP 0.56 4 40690 91296
XM_043250954.1 True 1551 mRNA 0.51 4 87741 91321
Loading

Neighbor


gene id symbol gene type direction distance location
LOC122353055 kiaa1024l,LOC107551403 coding upstream 106471 197792 ~ 202708 (-)
isoc1 isoc1 coding upstream 113375 204696 ~ 210347 (-)
slc27a6 slc27a6,LOC107726974,LOC107568002,LOC107669786 coding upstream 119551 210872 ~ 226209 (-)
slc12a2 slc12a2,LOC107680742 coding upstream 201871 293192 ~ 332004 (-)
LOC122352523 ctxn3,LOC107711251 coding upstream 251468 342789 ~ 348073 (-)
LOC122352556 NA non-coding upstream 174169 265490 ~ 266417 (-)
G73515 NA non-coding upstream 193688 285009 ~ 285222 (-)
G73510 NA non-coding upstream 199845 291166 ~ 292261 (-)
G73518 NA non-coding upstream 237956 329277 ~ 329901 (-)
G73550 NA non-coding upstream 244437 335758 ~ 336393 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other upstream 268483 359804 ~ 396620 (-)
G73662 NA other upstream 602127 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 698102 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 793835 885156 ~ 888012 (-)
G74058 NA other upstream 1354002 1445323 ~ 1448886 (-)

Expression


LOC122353100(golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC122353100(golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803) Expression in each Bioproject

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LOC122353100(golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 800.
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Co-expression Network