c10h5orf63 (LOC107715565,LOC107657471,LOC107576909)


Basic Information

Item Value
gene id c10h5orf63
gene name LOC107715565,LOC107657471,LOC107576909
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 396440 ~ 398859 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU108810
taaacacactctCTGATAATTAGATTAATCTGAGCTCTTCCTCCAGCAGCTCTGAGGTAATTACTGATAAATGCAtcatgaagtgtgtgtgtgtgtgtgtgtgttccaggaGCCGTGTCCTCTCTGTGATGAAGCCAAAGCAGCTCTGGAGCCCTACAGACACAGAtttgAGCTGCAGGAGGTGGACATCTCTCTGCCGGAGAACAGAGTCTGGTTGGACCGGTACCGTCTCCACATCCCCGTCTTTCACCTGAACGGAGAGTTTCTGATGCAGCACCGCGTGAACACAGAGCTCCTGGAGAGACGTCTGGAGAAGATCTGCTCTCCATCACCTTCAGGCGGCTCATCCTGAAACATTACCCACAATCCTCTGCACTCAGGAGTTAATGGGAAATGAGCtatcaaaaataatacatttgagaCAAAAGCAGATGTTTCCTGCAGTTTTGATGAAGCACTGGCGGATGGGATTATACCtggattaaaataaagtatttttcta
>TU108811
GTGGACAGCTTCCGTTCCGGCGCGTGATTATCGTCATTGgaGCCGTGTCCTCTCTGTGATGAAGCCAAAGCAGCTCTGGAGCCCTACAGACACAGAtttgAGCTGCAGGAGGTGGACATCTCTCTGCCGGAGAACAGAGTCTGGTTGGACCGGTACCGTCTCCACATCCCCGTCTTTCACCTGAACGGAGAGTTTCTGATGCAGCACCGCGTGAACACAGAGCTCCTGGAGAGACGTCTGGAGAAGATCTGCTCTCCATCACCTTCAGGCGGCTCATCCTGAAACATTACCCACAATCCTCTGCACTCAGGAGTTAATGGGAAATGAGCtatcaaaaataatacatttgagaCAAAAGCAGATGTTTCCTGCAGTTTTGATGAAGCACTGGCGGATGGGATTATACCtggattaaaataaagtatttttcta
>XM_043249793.1
ATGAAGAGAAGCGCTGTACCTGTGCTCTGCTCCGCGACGAGCGTCTCTCCTGAAGACTCCGCGCGAACTGACGCGCTGCGCGAGGGACGCGACGCGACGGGAACGCGCCGGCCGCGTGACTATAGAAACCCTTCTGGAACCAAAGCCATCAGTATGTTTCACAAGAATAAGgaGCCGTGTCCTCTCTGTGATGAAGCCAAAGCAGCTCTGGAGCCCTACAGACACAGAtttgAGCTGCAGGAGGTGGACATCTCTCTGCCGGAGAACAGAGTCTGGTTGGACCGGTACCGTCTCCACATCCCCGTCTTTCACCTGAACGGAGAGTTTCTGATGCAGCACCGCGTGAACACAGAGCTCCTGGAGAGACGTCTGGAGAAGATCTGCTCTCCATCACCTTCAGGCGGCTCATCCTGAAACATTACCCACAATCCTCTGCACTCAGGAGTTAATGGGAAATGAGCtatcaaaaataatacatttgagaCAAAAGCAGATGTTTCCTGCAGTTTTGATGAAGCACTGGCGGATGGGATTATACCtggattaaaataaagtatttttctaGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108810 False 502 TUCP 0.47 2 398268 398856
TU108811 False 432 lncRNA 0.49 3 397730 398856
XM_043249793.1 True 567 mRNA 0.52 4 396440 398859

Neighbor

gene id symbol gene type direction distance location
LOC122353112 LOC107726979,LOC107669787,LOC568883,LOC107568003 coding upstream 159134 227167 ~ 237306 (+)
LOC122353215 NA coding upstream 302236 93311 ~ 94204 (+)
aldh7a1 aldh7a1 coding downstream 14034 412893 ~ 420454 (+)
sub1a sub1,LOC107686443,LOC107562553,LOC107685153,LOC107713349,LOC107571107,LOC107552599 coding downstream 105501 504360 ~ 506120 (+)
pstpip2 pstpip2,LOC107744171,LOC107685173 coding downstream 108745 507604 ~ 515636 (+)
mtrex skiv2l2,LOC107744101,LOC107571110,LOC107713350,LOC107686493 coding downstream 137549 536408 ~ 564154 (+)
hvcn1 LOC107686438,LOC107744097,LOC107562590,LOC107685148,LOC107575472 coding downstream 215015 613874 ~ 616743 (+)
G73523 NA non-coding upstream 48533 347548 ~ 347907 (+)
G73465 NA non-coding upstream 104173 287869 ~ 292267 (+)
G73463 NA non-coding upstream 145359 206021 ~ 251081 (+)
G73467 LOC107580357 non-coding upstream 176816 208899 ~ 219624 (+)
LOC122353056 NA non-coding upstream 191876 202451 ~ 204564 (+)
G73559 apbb1,LOC107750985,LOC107673752,LOC107565841 non-coding downstream 26094 424953 ~ 427515 (+)
G73560 NA non-coding downstream 29997 428856 ~ 429270 (+)
G73589 NA non-coding downstream 253685 652544 ~ 653003 (+)
G73588 NA non-coding downstream 254755 653614 ~ 673309 (+)
G73656 NA non-coding downstream 396476 795335 ~ 795689 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other upstream 110200 242243 ~ 286240 (+)
pmaip1 NA other downstream 284247 683106 ~ 774374 (+)
isl1b NA other downstream 293265 692124 ~ 695923 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other downstream 397152 796011 ~ 801923 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other downstream 535210 934069 ~ 945860 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 678837 1077696 ~ 1084039 (+)

Expression


Co-expression Network