pmaip1


Basic Information

Item Value
gene id pmaip1
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 683106 ~ 774374 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU108988
TTAACCGCGGCTTCTAACTCCACCGTCCATTCGGAGAAGATCATCCAGCCTCGCTGAGAACCCCCGAGATGGCGAAGAAAGAGCGCGCGGCCGCGGCGGAGTGCGCGCACGAGCTGCGCGGGCTCGGGGATCTGCTCGACCGGAAGCACAGACTGCTGaagatcatcatcatcatcatcatcaccctcCAGAAACAACACGCGGACGGGAACAGATGAATGCGTCCAGACCGAACCGGCCGTGACCCAACATCTCAAGAGGATCCCAAGACGAATCCAAACCAGATACGGCCTTCTTAGACGAAGAAGAGGGCCTTTTCTGGGCGCCATGTTTATCTCTGAGGGGTTTTGAAGAGCAGGAAGTTCTCTTGGTCGAGACTTCTGCTTATTCATTCTCATATTCTCAAAAAACCCCTGTGAAGTAGAGACTGGTGTGAAACGGACGGCTTGTTTTGTAGcccacttttttattttctttttgtttcagatGCCTAACTTAATACTTTGCGAACAATTCCAGTTTCGCAGATGGATTCTTGACCCAATTTAGCTCTAAAATTGACCTGGAGATCAATTTGGCTTAagatgtgtgtatgtatatatatatatatat
>XM_043250018.1
CGCAGACGCGTCACGTGGACGGGGATCTCCGAGAGTCACGTGCTTTTTCACGTCACCCTATTTAACCGCGGCTTCTAACTCCACCGTCCATTCGGAGAAGATCATCCAGCCTCGCTGAGAACCCCCGAGATGGCGAAGAAAGAGCGCGCGGCCGCGGCGGAGTGCGCGCACGAGCTGCGCGGGCTCGGGGATCTGCTCGACCGGAAGCACAGACTGCTGaagatcatcatcatcatcatcatcaccctcCAGAAACAACACGCGGACGGGAACAGATGAATGCGTCCAGACCGAACCGGCCGTGACCCAACATCTCAAGAGGATCCCAAGACGAATCCAAACCAGATACGGCCTTCTTAGACGAAGAAGAGGGCCTTTTCTGGGCGCCATGTTTATCTCTGAGGGGTTTTGAAGAGCAGGAAGTTCTCTTGGTCGAGACTTCTGCTTATTCATTCTCATATTCTCAAAAAACCCCTGTGAAGTAGAGACTGGTGTGAAACGGACGGCTTGTTTTGTAGcccacttttttattttctttttgtttcagatGCCTAACTTAATACTTTGCGAACAATTCCAGTTTCGCAGATGGATTCTTGACCCAATTTAGCTCTAAAATTGACCTGGAGATCAATTTGGCTTAagatgtgtatgtatatgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttggggaGACCCAAAAACAGCAAGTGTCATTACTTTATTTCATAATTCATGTAGtgaaattcatttaaacagtGACTTAACGTGTCCAAATTTTATTTCGGAAccattctttatttatttcttgttcGGAGGACCTGTAGTTGTCAATGTAAAGAAGTATCAGTTCTTATGAAGCATTCGAATGGTTTAATCTACATATGAAGTTAAAGCTTGGAGCGCAGTTTGTCAGATGTATATTTATGATGTGTGGAAGAAAACCCAGAAATGATCACAATGTACAGTCGTGCCCAAAAGtcttgagaatgacataaatattggaaattggaaaa

Function

GO:

id name namespace
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108988 False 612 lncRNA 0.48 3 683167 774374
XM_043250018.1 True 1058 mRNA 0.42 2 683106 684241

Neighbor

gene id symbol gene type direction distance location
LOC122353206 NA coding upstream 2542 674608 ~ 680564 (+)
aplnrb aplnrb,LOC107713340,LOC107685146,LOC107686435,LOC107562592,LOC107744094 coding upstream 17329 663951 ~ 665777 (+)
tbc1d10ab tbc1d10a,LOC105895496,LOC106579927 coding upstream 33468 637670 ~ 649638 (+)
pptc7b pptc7b,LOC107744096,LOC107713343,LOC107685147,LOC106563180,LOC105909313 coding upstream 49114 623272 ~ 633992 (+)
hvcn1 LOC107686438,LOC107744097,LOC107562590,LOC107685148,LOC107575472 coding upstream 66363 613874 ~ 616743 (+)
snx18b snx18b,LOC107686428,LOC107744084,LOC107685139,LOC107595537,LOC107597629,LOC107713269 coding downstream 69781 844155 ~ 847891 (+)
rasgef1bb LOC107597626,LOC107595538,LOC107685137,LOC107686427,LOC107713332,LOC107744082 coding downstream 100327 874701 ~ 883480 (+)
antxr2b LOC107597625,LOC107744079,LOC107686426,LOC107685134,LOC107713331,LOC107595564 coding downstream 114328 888702 ~ 897888 (+)
paqr3b paqr3b,LOC107713330,LOC107685136,LOC107595565,LOC107744080,LOC107597624,LOC108433513,LOC108276876 coding downstream 123856 898230 ~ 901850 (+)
lhx6a lhx6,LOC107597616,LOC107685129,LOC106561716 coding downstream 171629 946003 ~ 958730 (+)
G73588 NA non-coding upstream 9797 653614 ~ 673309 (+)
G73589 NA non-coding upstream 30103 652544 ~ 653003 (+)
G73560 NA non-coding upstream 253836 428856 ~ 429270 (+)
G73559 apbb1,LOC107750985,LOC107673752,LOC107565841 non-coding upstream 255591 424953 ~ 427515 (+)
G73519 NA non-coding upstream 286005 349033 ~ 397101 (+)
G73656 NA non-coding downstream 20961 795335 ~ 795689 (+)
G73710 NA non-coding downstream 30996 805370 ~ 805665 (+)
G73711 NA non-coding downstream 33244 807618 ~ 807846 (+)
G73727 NA non-coding downstream 80840 855214 ~ 855884 (+)
G73731 NA non-coding downstream 109879 884253 ~ 884487 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other upstream 284247 396440 ~ 398859 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other upstream 396866 242243 ~ 286240 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other downstream 21637 796011 ~ 801923 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other downstream 159695 934069 ~ 945860 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 303322 1077696 ~ 1084039 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other downstream 1336822 2111196 ~ 2111694 (+)
G74171 NA other downstream 1419723 2194097 ~ 2200467 (+)

Expression


Co-expression Network