G73711


Basic Information

Item Value
gene id G73711
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 807618 ~ 807846 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU109069
ATTAATCCCAAGTGTTCATCCGTCTGCATACTAATATTCGTCTGGTACAGCGTGAGTGACTCATTTCAAACGGTCTCAGGTTATTTTAGATAATGTCTCTTCTCCAGACACAATACCCATTACCAAAAGATGGCTTTTTCAGAGGTTCATTCTTTCAACAgcttcatttgcatttcacGCCGTCGGAACAGGTTTCGTCAGTCAGATCTGAAAATCAGAGGAATCATTT

Function

GO:

id name namespace
GO:0003015 heart process biological_process
GO:0060047 heart contraction biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko05410 Hypertrophic cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU109069 True 229 lncRNA 0.40 1 807618 807846

Neighbor

gene id symbol gene type direction distance location
itga2.2 itga2.2,LOC107686432,LOC107744091,LOC107685142,LOC107713338,LOC107597671 coding upstream 16983 766692 ~ 790635 (+)
LOC122352656 itga2,LOC107713336,LOC107744146,LOC107686486 coding upstream 41949 751480 ~ 765669 (+)
itga1 itga1,LOC107686433,LOC107685143,LOC107595560,LOC107562550 coding upstream 58684 709494 ~ 748934 (+)
LOC122353206 NA coding upstream 127054 674608 ~ 680564 (+)
aplnrb aplnrb,LOC107713340,LOC107685146,LOC107686435,LOC107562592,LOC107744094 coding upstream 141841 663951 ~ 665777 (+)
snx18b snx18b,LOC107686428,LOC107744084,LOC107685139,LOC107595537,LOC107597629,LOC107713269 coding downstream 36309 844155 ~ 847891 (+)
rasgef1bb LOC107597626,LOC107595538,LOC107685137,LOC107686427,LOC107713332,LOC107744082 coding downstream 66855 874701 ~ 883480 (+)
antxr2b LOC107597625,LOC107744079,LOC107686426,LOC107685134,LOC107713331,LOC107595564 coding downstream 80856 888702 ~ 897888 (+)
paqr3b paqr3b,LOC107713330,LOC107685136,LOC107595565,LOC107744080,LOC107597624,LOC108433513,LOC108276876 coding downstream 90384 898230 ~ 901850 (+)
lhx6a lhx6,LOC107597616,LOC107685129,LOC106561716 coding downstream 138157 946003 ~ 958730 (+)
G73710 NA non-coding upstream 1953 805370 ~ 805665 (+)
G73656 NA non-coding upstream 11929 795335 ~ 795689 (+)
G73588 NA non-coding upstream 134309 653614 ~ 673309 (+)
G73589 NA non-coding upstream 154615 652544 ~ 653003 (+)
G73560 NA non-coding upstream 378348 428856 ~ 429270 (+)
G73727 NA non-coding downstream 47368 855214 ~ 855884 (+)
G73731 NA non-coding downstream 76407 884253 ~ 884487 (+)
G73739 NA non-coding downstream 98470 906316 ~ 907653 (+)
G73732 NA non-coding downstream 109950 917796 ~ 919493 (+)
G73763 NA non-coding downstream 308287 1116133 ~ 1116389 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other upstream 5695 796011 ~ 801923 (+)
pmaip1 NA other upstream 33244 683106 ~ 774374 (+)
isl1b NA other upstream 111695 692124 ~ 695923 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other upstream 408759 396440 ~ 398859 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other upstream 521378 242243 ~ 286240 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other downstream 126223 934069 ~ 945860 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 269850 1077696 ~ 1084039 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other downstream 1303350 2111196 ~ 2111694 (+)
G74171 NA other downstream 1386251 2194097 ~ 2200467 (+)
smad2 smad2,LOC107743055,LOC107653131 other downstream 1423576 2231422 ~ 2250897 (+)

Expression


Co-expression Network