G73888


Basic Information

Item Value
gene id G73888
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1392148 ~ 1392465 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU109338
GAGCACTTGGTGACGAGAGCGTCGCCCTGTGGGGTAGACAAAAGCACAAAGCAGCGATCGCACATGATCAGATGGGGTTTAGCGCTAAGCTATTTGTAGAACATGCTAGAATGAATGTCTCTTGGCAGGTTAGCATTAAATTGGCAGGCTCAGCCGTGTGTGTGGGTGCTGGTATTGACAGTCTAAATGCAGCAGATCTGCGCTTTTGTTGGTGGCTCGCTGGCTCCAGGCGCTTCCTGTAATGTCTGCAGcgtctctttctctcatctAAATACGCTTCGGCTTTTACGTGTGTGACGGGAAACTCACTGGCAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109338 True 318 lncRNA 0.50 1 1392148 1392465

Neighbor

gene id symbol gene type direction distance location
sardh sardh coding upstream 1830 1335411 ~ 1390318 (+)
cercam cercam,LOC107744239,LOC107597609,LOC107595552,LOC107685123 coding upstream 58324 1324327 ~ 1333824 (+)
urm1 urm1,LOC107685124,LOC107686415,LOC107595551,LOC107597610 coding upstream 82114 1300479 ~ 1310034 (+)
sh2d3ca sh2d3ca,LOC107597612,LOC107744235,LOC107686416,LOC107685125,LOC107595550,LOC107713320 coding upstream 96139 1251019 ~ 1296009 (+)
LOC122352732 rabgap1,LOC107744072,LOC107686418,LOC107685165 coding upstream 279974 1042039 ~ 1112174 (+)
fam163ba fam163b,LOC107597608,LOC107595554,LOC107713289,LOC107685121,LOC107658661,LOC107744266 coding downstream 18016 1410481 ~ 1432107 (+)
swi5 LOC107713318,LOC107685186,LOC107595581,LOC107658658,LOC107597663,LOC107744259 coding downstream 48158 1440623 ~ 1444264 (+)
slc27a4 slc27a4,LOC107658662,LOC107744240,LOC107685116,LOC107713315 coding downstream 52817 1445282 ~ 1463857 (+)
ptgdsa LOC107744241,LOC107658663,LOC107597660 coding downstream 71521 1463986 ~ 1466535 (+)
LOC122352663 ambp coding downstream 74307 1466772 ~ 1473452 (+)
G73880 NA non-coding upstream 21941 1312144 ~ 1370207 (+)
G73766 NA non-coding upstream 251489 1140349 ~ 1140659 (+)
G73760 NA non-coding upstream 265682 1117113 ~ 1126466 (+)
G73763 NA non-coding upstream 275759 1116133 ~ 1116389 (+)
G73732 NA non-coding upstream 472655 917796 ~ 919493 (+)
G73889 NA non-coding downstream 1990 1394455 ~ 1394784 (+)
G73904 NA non-coding downstream 95778 1488243 ~ 1488680 (+)
G73905 NA non-coding downstream 97753 1490218 ~ 1490490 (+)
G73906 NA non-coding downstream 98059 1490524 ~ 1490828 (+)
G73934 NA non-coding downstream 158194 1550659 ~ 1586671 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other upstream 308109 1077696 ~ 1084039 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other upstream 446288 934069 ~ 945860 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other upstream 590225 796011 ~ 801923 (+)
pmaip1 NA other upstream 617774 683106 ~ 774374 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other downstream 718731 2111196 ~ 2111694 (+)
G74171 NA other downstream 801632 2194097 ~ 2200467 (+)
smad2 smad2,LOC107743055,LOC107653131 other downstream 838957 2231422 ~ 2250897 (+)
cntfr cntfr,LOC107554853,LOC107738850,LOC107756542,LOC107554231 other downstream 1196631 2589096 ~ 2705724 (+)
il11ra LOC107756541,LOC107554229,LOC107750187,LOC107653503 other downstream 1385394 2777859 ~ 2780475 (+)

Expression


Co-expression Network