XLOC_006593 (srgn)


Basic Information

Item Value
gene id XLOC_006593
gene name srgn
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 23070581 ~ 23074454 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012737
GTGTATTTTTAAAACGGCGGTTGGACTCGGTTCGTGTGTATTAGTAATAGTGTTTTTAAGACGGAGAGTTGAGAAAGCTTTGCCAAAGCGAGCGGCTGTAGGCTGATTTCAGGAAACAATGACGCACGCAGGGGCAGGCTCTACAACACACTATTGAACTGGCAGGAAAACTCTTGTCTCAAGTTCATCTGAAGACATTTTCATTCGCATCTTCTGCTTGACGGGAACAATAGGATGAGGTTTTACCACATGATAACTTTGGCATTGGCGATAATATGCCTTTCTGGACACAGTGGACTTGGAGCTCCAGCAGCTTCAACCAAAGGCAACTATATGTGGGTGGAATGCAAACCGGATGGTAAGAATGCAAACTGTCTCACAAAGAAGGGCCCCTTGATCCCCCTGGATGGGCAACGTACCCGACTTCCACCATCTGCCGCAAAAGACATagtTGCAGTTAGTGCCGAGGAAGCCACTCCTGATACGGAGGATCTGTCAGGAGACGGTTCGGGAGACTCGGACAACTTTCCTGTTTTAGCCAGCAAGAAGCAGCCATGGAGGAGAGATGCTCCGGAGCAGGACATCTTCAAGAATGAAGAGGAAGGATCGACAACATTCAGTGGAGACATCGATTACTCCGAATACGTCTCGACTCAAAAAGTAAATTGGCTTTCTGAAGAGGATTTGAAAGAGGAGAACATTATTGCGTAAAAAGAAGAGCTGCTTTGCGTCTCATGTGATTCTTTctggtttttgtttatttgtacaaTGTGAAAGATGCAGGATACTGCTTTTTTTAGTCAcagatataattaatatattttcgtAGACTGTGACACGCTCTGCAAAAGTCAATTGTATTCCAGTTTGCATTCTAAGGATCTGTTTGATTTGCTCtttaacttttatattattattttatttgctcttaaagggatagttcacccaaaagtgaacatGACCTAATCATTTATTCTCTTCATGTGGTTTTAAcccttttctttcttctgttgaacataaaagaagatattttgaagtatgctaTTGCTGGAGataaaactatggaagtcaatgagtgccaactgtcagcattcttcagaatatcttattttgtgttcaccaTATGAACAAAACTTAAAtcaacaagggtgagtaaataatggcagatttttttagttttgtgtgaactgtccctttaatgtttGTCCCAAGATCTATTTGAATTCATTTGGAATGGAAATATTAATTCAACAGAGGCAACTGTATGGACAGCAAGTAAATGTTGTACATTGTTTGTGCAGATATTGTATTTGTATAATATACTGAATATTCCAAAGAAAaaagtatatacattttaagaaatgATAATAAAGCTTTTGTTTCTTATTTCAACCCA
>TCONS_00012738
CTTGACGGGAACAATAGGATGAGGTTTTACCACATGATAACTTTGGCATTGGCGATAATATGCCTTTCTGGACACAGTGGACTTGGAGCTCCAGCAGCTTCAACCAAAGGCAACTATATGTGGGTGGAATGCAAACCGGATGGTAAGAATGCAAACTGTCTCACAAAGAAGGGCCCCTTGATCCCCCTGGATGGGCAACGTACCCGACTTCCACCATCTGCCGCAAAAGACATGTGAGTGTCTGTTCATCCATATCCAATTATATTGTGAAATCAATTTGAGTATGTTGTGTcgtatttgtataaataaatacaatttattcatATAAAGAGTATTGAAAACACAAGAGTTGAGTAACTTTTTAGGACATGTAATATGTTGTAACAGGATGGGTGACTTAAGAATGATTAAGAATATGAGTATGGAAATGTGGCACTACATTATGCAACCATAATACTTTTGaaatttgatagttttttttcttataatcTATCTCAGGACAGTTTGATAGTCAACGAAGAGgcaagttttaataattttaataaaagcatttaatTAGTACGTATATGTACACGTATAGGAAGTATTGCCCACTTCCTTAAACATGACCACAAAAAAACTGTGGTTAGGTATTAAACGTTTTCTTTCTCAGaatgattttttacaaaatatgctGAAGTTGTTTAAAGTTGGGAGATTTCCAGAGTCACTTGTGACATATGAGGTGGCATTTTGAATGTGGTGCTTTATTTCTTGACTTGAATAATTTTCCTGCCAGGTTTTATTTTTGCTGAAAAT

Function

symbol description
srgn Is expressed in neutrophil. Orthologous to human SRGN (serglycin).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7127 Is expressed in neutrophil. Orthologous to human SRGN (serglycin).

Ensembl:

ensembl_id ENSDARG00000077069

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012737 False 1396 mRNA 0.39 3 23070581 23074454
TCONS_00012738 True 798 mRNA 0.36 2 23072376 23074238

Neighbor

gene id symbol gene type direction distance location
XLOC_006592 vps26a coding downstream 3200 23058268 ~ 23067381 (-)
XLOC_006591 supv3l1 coding downstream 18815 23037585 ~ 23051766 (-)
XLOC_006590 hkdc1 coding downstream 38778 23017498 ~ 23031803 (-)
XLOC_006589 hk1 coding downstream 62768 22972888 ~ 23007813 (-)
XLOC_006588 tspan15 coding downstream 108971 22924024 ~ 22961610 (-)
XLOC_006594 kifbp coding upstream 9404 23083858 ~ 23095006 (-)
XLOC_006595 NA coding upstream 138305 23212759 ~ 23217818 (-)
XLOC_006596 si:dkey-103j14.5 coding upstream 159502 23233956 ~ 23270576 (-)
XLOC_006597 NA coding upstream 333575 23408029 ~ 23411631 (-)
XLOC_006598 prim2 coding upstream 413828 23488282 ~ 23612369 (-)
XLOC_006471 BX537274.2 misc downstream 12805676 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 22244356 825904 ~ 826225 (-)
XLOC_006585 BX530068.1 non-coding downstream 223097 22843830 ~ 22847484 (-)
XLOC_006582 CR550304.1 non-coding downstream 286148 22778060 ~ 22784433 (-)
XLOC_006578 BX649385.1 non-coding downstream 875413 22191361 ~ 22195168 (-)
XLOC_006577 NA non-coding downstream 1130616 21925701 ~ 21939965 (-)
XLOC_006570 NA non-coding downstream 1923199 21146114 ~ 21147382 (-)
XLOC_006602 AL772289.1 non-coding upstream 886838 23961292 ~ 23961406 (-)
XLOC_006605 CR762497.2 non-coding upstream 1052609 24127063 ~ 24127179 (-)
XLOC_006607 CR762497.1 non-coding upstream 1209216 24283670 ~ 24286390 (-)

Expression


Co-expression Network