adamts6 (adamts6,LOC107744255,LOC107685101,LOC107713302)


Basic Information

Item Value
gene id adamts6
gene name adamts6,LOC107744255,LOC107685101,LOC107713302
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1774223 ~ 1846902 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU109710
CTCTGCGTTGCCGATGAAGTGAGTTCACGGagagctttttttcccccccgtgCAAGGACACAACTACATTTGTTGGCATGAGAATGGCTTGAAGCGAAACGAGAGGTTTGCTGAAGAATGCACTGAAGTGGAAACAAATGAAGATTTCTACTGTCTGCGTGCGTTCTACAGTAAAAGACGGCAAACCAATGGATCGTTTGGGACAGGCTCCTAATATAGATCTGCTgttttggaataacatgaagAGAGTTCATATGGATTCTTGCCCTGCTCATGGCTGACAAAGGTGCAGGATCAAGTCGCCTTTAGGAAGAACC
>XM_043250234.1
tttttttttttttttggttcacaTTCGGAGTCTTTCCCCTCTGCGTTGCCGATGAAGTGAGTTCACGGagagctttttttcccccccgtgCAAGGACACAACTACATTTGTTGGCATGAGAATGGCTTGAAGCGAAACGAGAGGTTTGCTGAAGAATGCACTGAAGTGGAAACAAATGAAGATTTCTACTGTCTGCGTGCGTTCTACAGTAAAAGACGGCAAACCAATGGATCGTTTGGGACAGGCTCCTAATATAGATCTGCTgttttggaataacatgaagAGAGTTCATATGGATTCTTGCCCTGCTCATGGCTGACAAAGGTGCAGGATCAAGTCGCCTTTAGGAAGAACCTGGGATTAAGTGGACTGAGATTCAAATGTGTCGAGGATGCTTGTCACGGATATGTTATGGTGCGAAGCTGGATTGATCATATCGCTTTAATCCACTTGTAGCCCTCCCCAACCCCCATACCCCACCCCATGTCAGATCTTCCCTAAATTATGGAAATTTTTTGGAAGACGCTGACTTGGATATTTAGCCTGGTCTTGGCCGCTGCTGAAGCTCAGATCCTTTCGTACAACTCTCAAGCGGAATTCCTGTCCACGCTGGAGCACTATCAGCTAACAGTACCAGTGCGGGTGAATGAGAGGGGCCAGTTCATGAGTTACACTGTGAAGCATTACAGGCCCGGTCGGCGGAGACGTGGACTGGACCAGGACGAGCTGGACCACACCGAGACCAGGCTTTTTTACAAACTCTCAGCCTACGGCAAGCACTTTCACCTGAACCTGACACTCAACCCCATCCTGGTTTCGAAACATTTCACGGTAGAGTACTGGGGCAAAGACGGACTAGACTGGCAGCATTCAGTGGTCGATAACTGCCACTATGTTGGATACCTACTGGATCAATATAGCACTACAAAAGTGGCATTGAGCAACTGCAAAGGCTTGCATGGTGTCATAACCACAGAGGACGAGCAATATTTAATAGagccattaaaaaatatatccaGAAATTTCAGTGATGTCAACCACGAAGGACAACCAcatgttatttataaaaagacTTCTATTCCTTCTCTGCAAGAGCCAAGCGAGGAGTTCAGCTGTGGTGTTTCAGACCTCACGATAAACAGGACTCCCAGCTACGATACCAATCCTGAAGCAAACACACCTTACCCGGCCCCGGACGGCGACAGCTCGATGGGTGGCCACCGCCAGAGGCGTTCTGTCAGCTCTGAGCGCTTTGTGGAGACCCTGGTGGTGGCGGACAAAATGATGGTTGGCTACCACGGTCGCAAAGACATCGAGCACTACATCCTCTCCGTAATGAATATTGTTGCCAAACTTTACCGTGATGCCAGTCTTGGAAACGTTGTGAACATTATTGTAACCCGACTGATTGTTCTGACGGAGGATCAGACCAACTTAGAGATAAACCACCATGCGGACAAATCTCTAGACAGCTTCTGTAAATGGCAGAAATCCATTCTTTCTCATCAGGGAGATGGAAACAGTATCCCAGAGAACGGGATCGCCCATCACGACAACGCTGTTCTCATTACAAGGTATGACATCTGCACCTATAAGAACAAACCCTGCGGTACTCTCGgtttgGCGTCCGTAGCCGGGATGTGTGAGCCAGAGAGGAGCTGTAGTATTAATGAAGATATAGGCCTCGGTTCGGCCTTCACTATTGCACATGAGATCGGACACAATTTCGGCATGAACCACGATGGGATCGGGAACTCCTGCGGGACCAAAGGTCACGAGACAGCCAAGCTGATGGCGGCCCATATCACAGCCAACACCAACCCCTTCTCCTGGTCGGCCTGCAGCAAGGACTATATCACCAGCTTTTTGGAcTCAGGTCGGGGAACATGTCTGGACAATGAGCCTCTGAAACGAGACTTCCTGTACCCCACTGTGGCTCCAGGGCAGGTGTACGATGCAGATGAGCAGTGTCGTTTCCAGTACGGTGCCTCCTCCCGTCAGTGCAAATATGGGGAAGTGTGTAGAGAGCTCTGGTGCCTTAGCAAAAGTAACCGCTGTGTCACCAACAGTATCCCCGCCGCAGAAGGAACCCTGTGCCAGACCAGCAGCATCGAAAAGGGGtggtGCTATCAGGGGGAATGTGTGGCGTTTGGGACGTGGCCGCAGAGCGTGGACGGAAGCTGGGGACCCTGGACCTCCTGGGGCGAGTGCAGTCGGACCTGCGGCGGAGGCGTCTCCTCTTCCATGAGACACTGTGACAGCCCAGCGCCGACAGGCGGAGGGAAGTACTGCCTCGGGGAGAGGAAGCGCTACAGATCGTGTAACACTGACGCTTGTCCAGCAGGATCACGTGACTTTAGGGAGAAGCAGTGTGCCGATTTTGACAGCATGCCTTTCCGTGGGAAGTACTACAACTGGAAGCCGTACACTGGAGGTGGAGTGAAGCCGTGTGCGCTGAACTGTCTGGCTGAGGGCTACAACTTCTACACCGAGCGATCGCCCGCCGTCGTCGACGGCACGCGCTGTCAGGCCGACTCGCTGGACATCTGCATCAACGGAGAGTGCAAGCACGTCGGCTGTGATAACATCCTGGGCTCGGATGCCAAGGAGGACAGATGCCGCGTGTGCGGAGGGGACGGCAGTACGTGTGAGGTCACCGAAGGACTGTTCAACGATTCGCTGCCCCGAGGAGGTTATATGGAGGTTGTCCAGATACCAAAAGGATCGGTTCACATAGAAATCAGGGAAGTGGCCGTGTCGAAGAACTACATCGCTTTGAAATCGGAGGGGGATGACTATTACATCAACGGAGCCTGGACCATCGACTGGCCCCGGAAATTTGACATCGCAGGAACAGCCTTCCACTACAAGAGACCGACTGACGAATCTGAGTCGCTTGAAGCTTTAGGATCCACCACTGAAAGTTTGGTGGTTATGGTGCTACTACAGGAACAGAACTTGGGCATCCACTACAAGTTCAACGTACCGATCCAGCGCACAGGGAGCGGGGACAATGAAGTGGGCTTCTCCTGGCACCATCTGCCCTGGTCTGAGTGCTCAGCTACATGTGCAGGAGGCTCGCAGAAGCAGGAGGTGGTGTGTAAAAGACTGGACGACGGTTCGGTGGTCCAGAACAGCTACTGCGACCCGGACGGCAAACCGCCAGGGAACCAGCGACCTTGCAACACCGAGCCGTGTCCTCCGGAgtgGCTTATCGGTGACTGGTCAGAATGTGGGAAGACCTGTGACGGAGGTGTCCGAACACGTACTGTCTTGTGCATCCGTAAAATCGGACCCACAGAGGAAGAGACTCTGGAGGACAGTCACTGTCTGACTCATCGGCCAATAGAACAAGAGTCCTGCAACAATCAGTCCTGTCCGCCCCAATGGGTGACGCTGGACTGGTCTGAGtGTACCCCAAAGTGTGGCCCTGGCTTCAAGCACCGCATAGTTCTATGTAAAAGTAGCGACCTGACCAAAACCTTCCCACCAGCCCTCTGTTCTGACCACATCAAACCTCCGGTCCGTATTCGCTGCAGCCTGGGTCGCTGTCCGCCGCCGCGCTGGATCCCTGGAGAATGGGGACAGtgttcTGCTCAGTGTGGACTCGGGCAGCAGATGCGGACGGTTCAGTGTCTGTCATATACAGGACAGCCCTCCCCCGAATGTCCAGAGTCACTACGGCCCAACAACATGCAGCAGTGCGAAAGCAAATGCGACGCTACGCCCATCTCCGGTGGCGACGAGTGCAAAGACGTAAATAAGGTGGCATACTGCCCATTGGTGCTGAAGTTCAAGTTCTGCAGCCGTGCGTACTTCAGACAGATGTGCTGCAAGACGTGCCAAGGACACTGACCCCGTGGAGAGAAGCAGAGACAGATGCTGcaatgagaaaagagagagaaaactggCAGAGAGTAAAGTCAATGCTGGGCACAGAAGAAAGAAGCCTCTCTCTCGctaatcaacacacacacacacacacacacacacacaactgctTTTAGCCCTGTGGAACCCAAACCACTGCTCAGCACTGTGCTGAcacctgttttattttcacttctGTGAAGTGGGAATGtataaaatgatcattattgttgttatttttataacaataataataataattgattttggttattattattatcaatgtctTTCTGTAGTTATAATCCAAAGTGCTGGACACAACACTCACAGATATGGCACGGCAGAGATTTACTGCCGACATAAGGGAGTTCGGGACATTGGTATAACCCTGGGTCTTGCATTTACACTCCTAACATGGTTCTGTTGTCAACACTTCATTCAGGAGCCTTCAAACTGACAATGAGAGCTCACAATGGCAGCATCGGATCGAATGGAAGTCACTTTTTCAATAAGAGTTTGAGGCAACATGAGTGTCAGAGACTGTTGATGGTGTGACAAAGTAATCCGATACGGACATTTCCAAACATAGATAGGGCTGAAACTTTGTGACCGCAACATGCATttggtttaaagtaaaaaaaaaaacaacatttaaaatttttcacCCAAATGATATTTTACTCTCCTTCTAGTTCAGGGGTAGCCAGTCCTGTTCCTGAAGAACCGCAGACTTCAGTTGCCAGTTGTTTtaactaaactctgcaggatggTAGCCCTTCATGAGCAGGGTTGGTTTGGATTGACTTTTGGTTTTTGATTAGAAGTACATACCAGGATTGTCCAATCATACTCCTGTAAGGGTCAATATTCTAGAGTGTTTAGCGCCTACCTGCAACAACACACATCTGGAAGTTTCTAATCATACTGCAGATCCTAATTATGTGTGTTTAATCGGCATTGGAGCTGAAATTTCACTTTGCTTTTAGTCGAACACTTGCAAACTTCTCTTACCACTTCCCCCCTCCCCCCTCAGGCGAATCCATTTTAAAGTGGGTTCTACTTTGTTAAATTGACAGGTCACATCTGTAGAGAGCCTCAACCCCTCGACTTTTACCAAGGGTGCTTGGTGTACACTTCAGGCAGCTTCATAAACCAGATTGCAACACAATTATTATGTCACCTCAGACTGTGTTTAATTTACCTCCATGACTCTGACatgttaattattttctaattattttaaaaatataaataaatcaactccACACAAGAATCCAATTGATCAAATGTTCAGGACGTTACATTTTAGCCCGTCGCGAGGGTTATGCCAGTAGTGGTCACTCATGCAACATAATCAAAAACGTACATCCAAATCAAAGAAACTGATGGAGGTCAGCAAAGGAAGGGCATACAAACAAAATAGAAGACAGTTGAGTCTATTGGAGCAGGATTGAATATCCTTAGATGGGTAGTCAAtgttgttcagtttttttttgtgggtaAATGGAGGTCGTACTAGATATACATGTGGTTTATTCGAAATCCGTAACTTGGAacttttatgcacatttattcACTCTGCAAATGCTTTTTTCCAGAGCAACTTCCATTGCATTCATAGTTTACAGCCCTCGATCTTGGCATGGCTAGATTTTGTCAATAACTTTTGAAAGTAAGATAAAGACCCAAGGGCCAAAGACAAACAGGGTAGTGTGATTGGGTGCTTTGGTGCTGAATTTGTGCAGAAGAAATCTCAATTATAGCTTCAGAGTCCAGATGTTCAGTTGACTTAGCCACCTGTTTTACTGAGCTGAATCACATGACCACAGGCCAAAGAATTCCACCATTGTCTGACACCCGAACAAGGCCTGAAAATCAGATCAGTTCCAAAGGGACGTTTCTACTATTGTGTCTCTAGAATTATTGTGGACTCCAGAGAGACATTAATTGCGATTCTGACGTGATTCTGCTTTATGGATCCATATTCTGCTTTAAATTCTAGGGTTCTGACATCTATGCGTCTGTTCCGGGGACCGGCGTGTTCCAGACGCAATAATTTTCCCATAAAATGCGTGCTGCAGCCACACTCCGCCACATTATCAGCAGAATACACAGACAATCCATCAGCACAGGGATGACTTGCTCGGAGATCTCCAGGTCTGTGATGCTGATGCATTAGTAAAGTTAAGTGAAGGGCCAGTGCCTGGGTAACCTGCCAGACCCCACAGATCCGGTCTGCCATCAACTACCTCCAAAACACCCCCTCTTCCTCCTTCCCTGAGATCACAGCACTTCCAGCCCACTCTCTTAAACCCTCCACACTCAATGGTGCTTTTCTTTCCTCAGTGGAGGACTGTTTGTTCCACTGCCCTTCTTCCGCTCATCTTTTGAGTGGGTGGCTCTTCTGGCCCCATGGTGCTATAAGACCTTGATGCATTCTGGGTATGCGGTCTGAAAGAAACCCAAGAATACtttagctctgttccaaaacctagtgagctccCTACCTAGACCGGCTTTTTAAGGCATCATAGGTTTTACTTGCGCAACGGTCGTTCCAAAAAGTAggctgttcattttttttttataagaccTGTTTTTTAACCAATTTCAAGGCTGAATCACATTTCTTTTGCAaaggcaatcccagaatgcactgttCAGTGTCAGACAAGGTGAAAAATgtgctttgcatttttatgcttGTTGGACTATTGTATCATTAGCCTAGCTACTGGAAACAATTGTGCGTCATGTTTACTGTGCACTTTACGAATGCTATTTGTGTGGCATGTGAGGTTGTTGCATACGTAGTCTTGCAAATCAGTCAGTTGACAGGTCCTATTACCGTTACGATGCTGCTCTAGTCCTGAAATATACTCTACACAaccatacaaatacaaattctaGCTAAACTCAATTTTACATGATGCGTTATGTTGGACCATGTCGCATTCTTAGCATCGGTGCTGTACTATTACTGCTAGAACAAATCGAGAGCCCATGCTAAGTAtgttcaaaatgcatgttaGCATACTTACCCAAGTTATGTTTCTTGACATGGAAAGCAGTCGACTAAGCCACGCTAAGAAAAGCAGCTtgctaggttttggaacaaagctttctttctgtcttttacaTTGGTTTATGTTTGTAAACTTTTCAACAACCGAATGTTGCATTTTTCCATCAACTATGACTGAGTGACTTTTAACCTGCTATCTTATAGCAAGATGATATAGCATCAATTTTAATCATCTTTGTTACAGGACACAGTACATGAATGAAATCGAGGAGTTATgggacatttttatgtttttttaatcatacaaCCGATCTACTTTTGCTGCTGCTACTCTTTTGTAGCCACAAACACAATATTATTCAATTATGTATTATGAAATGTACTGGGATTATTCAACAGTGAACAGTGAACAGCAGAACTGTAGGCCCGACATGCTGAGCATCCTGTAAAAAGGCTTGAAGTACAAGTTTACTGGCTTTGGGACACGGACTCTCAATAAGACACTCAATGAAACTGGTACTGATCGCTGTGAACTTGTGTCTTTGAATGTCACATTGTTTAACCTGTACCTATAGAAGagagttttgcattttttgtgaatagttgcttacattttatattcagtaTTATTAATGTTGGTACACTgttactaattttttttttcatttgtaaattatatgCTAATTTATTGCCTTGTGTCACTTGTCTTATGTATGTTTCACTGCATGCAAACTGAAAACTAGTCTAGTGAAATCGATGCAGTGGAATAACACCCTTCACGATCTTGTTTTAGTCTTGGTAAAATGTGAGTTTGAATGTGTCTTATTTGCTACTAGAGCGCTCTTAAAACTACGTCAGAATGCTTTTGTGTGAGTCTGTGcgtttgagtgtgtgtatgttgatATGATATTACTGCACTGTTTCTCGAGGGCCAGTgctcacaaaaataataataataaataatggtaAATGGTGTCAAAGGGTAAGGACAAAAATATTCCCATAGTAACACTTTAACATTCTCAGTCCTTTGGCTTGTACCCTTGGTGAATCCAACAATATGTAATGGATCCtgaataaaatgactttaaaaggGT

Function

symbol description
adamts6 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS6 (ADAM metallopeptidase with thrombospondin type 1 motif 6).

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 6

GO: NA

KEGG:

id description
K08621 ADAMTS6; a disintegrin and metalloproteinase with thrombospondin motifs 6

RNA

RNA id representative length rna type GC content exon number start site end site
TU109710 False 317 lncRNA 0.46 2 1844996 1846864
XM_043250234.1 True 7995 mRNA 0.46 25 1774223 1846902

Neighbor

gene id symbol gene type direction distance location
srek1ip1 srek1ip1,LOC107558662,LOC107685105,LOC107713259,LOC107658680,LOC107744254 coding downstream 50100 1722599 ~ 1724123 (-)
LOC122352616 plac8.1 coding downstream 52904 1719875 ~ 1721319 (-)
plac8.2 plac8 coding downstream 56883 1715412 ~ 1717340 (-)
LOC122353114 NA coding downstream 66272 1706268 ~ 1707951 (-)
lin54 lin54,LOC107658675,LOC107685107,LOC107558659,LOC107744261 coding downstream 73153 1691155 ~ 1701070 (-)
trim23 trim23,LOC107658681 coding upstream 7188 1854090 ~ 1862055 (-)
apba1b LOC107667257,LOC107558696,LOC107705048,LOC107548674,LOC107742885 coding upstream 81972 1928874 ~ 1939997 (-)
zfand5b LOC107705050,LOC107742939,LOC107726558,LOC107667265 coding upstream 122580 1969482 ~ 1976383 (-)
erbin erbb2ip,LOC107667260,LOC107726559,LOC107705051,LOC107742960 coding upstream 131359 1978261 ~ 2043435 (-)
nln nln,LOC107667266,LOC107548669,LOC107705053,LOC107558702,LOC107743138 coding upstream 197260 2044162 ~ 2056057 (-)
G74075 plac8 non-coding downstream 56904 1592174 ~ 1717319 (-)
G74109 NA non-coding downstream 68546 1705098 ~ 1705677 (-)
G74110 LOC107558694,LOC107685106,LOC107658677,LOC107713304 non-coding downstream 71105 1702757 ~ 1703118 (-)
G74092 NA non-coding downstream 113337 1591541 ~ 1660886 (-)
G74090 NA non-coding downstream 113660 1658534 ~ 1660563 (-)
G74149 NA non-coding upstream 21070 1867972 ~ 1868946 (-)
LOC122353011 NA non-coding upstream 23091 1869993 ~ 1876752 (-)
LOC122352694 NA non-coding upstream 315242 2162144 ~ 2162704 (-)
LOC122352693 NA non-coding upstream 319489 2166391 ~ 2167347 (-)
LOC122352691 NA non-coding upstream 322417 2169319 ~ 2170549 (-)
nrarpa nrarpa,nrarp other downstream 286215 1483399 ~ 1488008 (-)
G74031 NA other downstream 300345 1466751 ~ 1473878 (-)
G74058 NA other downstream 325337 1445323 ~ 1448886 (-)
si:dkeyp-41f9.4 NA other downstream 886211 885156 ~ 888012 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other downstream 980499 789423 ~ 793724 (-)
LOC122352692 NA other upstream 347183 2194085 ~ 2197429 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other upstream 870195 2717097 ~ 2767195 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other upstream 1490437 3337339 ~ 3377784 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other upstream 1754710 3601612 ~ 3607788 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other upstream 2058712 3905614 ~ 3912742 (-)

Expression


Co-expression Network