G74317


Basic Information

Item Value
gene id G74317
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 2171007 ~ 2174363 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU109965
acccaataaaaatattaggaaAATTTTTTGAatgtctttacattgtttagagcattaatataatgtgaaaaaaaagacatgtatAAACATGCATAAGCAAAACTTTGTCTAAAGATGATTCTCAACTACGTTATAACTGAATTATTCGATATACCATTTTTCTCTCATCAAAATGCGTGTAAATGGTCATAAATGGGTTTTCTCTTTATATACAATGTATCTATAAgctaaaaataatttgcatattaatgtgctTTTGGGGCAAGTGTGAAAATGTGAGTAATAATTGACcagattttcataatatataatatttcatacaaTACTGAAACATCATTTCTTTCCTTGTTCGTTTGTTGTGTctcctaaaatgtaaaataaacatgcttATAGTCCTGCTTCTGAGGACATGCATGAAATCAACATGCTGTTTAgtaacagaaagtcatattttgatttgaaaccccCGTAACATTTACCTGAGATGTTGATTTATGACACAcagtttaaatgattattacaaaacattatcaataaatacattcttGAAGATAGATGAGGGAGTGGTCATGATGAAGCATCATTTGGTAtctcagaatttttattttttaagcataaatatctttactgccTCCCACTGTTCATTCTAGTAACTGCACACTTAGACTTGTGGGTAATAATGGGTGCTGGTGCTGTAACTAAGCAGGCGTTTCCTCACGAAACGTGCTCATTTTTAGCATCTAGATTTCACTTTGCCCAGAAACTTGAATGTACATGTTACTCAATCAATAAATTGAGATAATCTCCACCTATAATCAAATCTCACGTAAAACTCGGTATGCGCGCATAAAAATACTTACGTAACGTGCTACAGATTTCACTCATCGTGACTTCCCAAGATCATCTGAAATAAATGGCGCTAAGCACTCGCATTTTTTTAATGCGGCCTGAAGTTAAACCGCAGgcatttcagcttttttatGATACCTTTTATGTAACGATATATGCTTGTTAAAATGCCTGGGTGATCTAGATATGAACTGCTGCAGGCCACATACTGCCAACCAAAGAATTACTGAACGCTTTAAACGTCGTTAAAGCTAGGATCTGAAACCTTTAGACAAACGAACAGAACAAATGGTGTTCACGGctattttgcataaaatattcacaaagccTAGTAATTAAATATACGCGCGCTTATATGTGTATAGCAGATTTGTTTCCGTTCTTTGATTCGTTTAACCGCTTAATTGTATAAAGTGTGCACGTCTTACTAGAGGATGTCTGTGTGGTTGCTGAATATTTTACGTTAGGTAACAAAAACCTAAGTTCCTAAGCTTAGATGCTGCTAGGTTAGCTTTTCTCAACCAAGCAGTTACGTCTAACCGGCAGGTGTCTAGGTGATTTTATTCTAGTGGATGTTTAAAGTTCTCACAATACATTTGTCTAGCATTTCTATCGTTTCATGACCTAACAAACTAGTTACGGTGAAATATGTAGCTATTTTTTGTCTTTCGAACAAATGGCGATTGGTCGTTATATAATACAACGACATTCACAGTTTTAGGTGTGTCTTTAGTTTCCAAATACTTTCTGGTCAcgctgtataaaaataaaataatgagatGGTACCTTGTGCAATCTGATCTTCTTTAAAGTATTGTGTAACATCGAGTTCATTAACTGTTTGTAAAgaagtttagtttttaaaacagACGAGGaaatatatcacttttttaAAGGAACGCATCGGAAAATGACCGCATTACTGTGTGATTTTACATTAAGTAATATAATAGCATTGCaaagactgaaataataataattattattatttttctattgtgAAATAAACATTGAGGCTGTTTTGTGAAGttaatcaaatgattaaaataaatagatttttatttttattaatatttgctcACCACTTTCAAGAATTTGTCTTTTAAGGAGACGGCAAGTTTAAGGTTAAGGTGAGggattactagcatattggctgtttattacatataaagcACATATGAGTGGCTTATTCTGCATGAAAAAATTAGGAATTTACTGAGGCAAAAGTTTATAGTTAATAGttgtccttaaaataaagtgtgaccaattacttttaatatagGCTACCTTTTggtcctttaaaataaaaaaaaattaaagcatcaATCCTTAGAGAAGAGAGACTTTGCCAtttttgaaaaccaaaaaaaaaatccttttgtgTTGCATGGAGATTTAAGGtcaaactgtatttattattattattttgggttaactttttttctctaagaCAAGGCTGAAAATGAGAGTAGTTTGAAGAAACTCtgcttaaaggaacactgcACTTTTCTGacaataggctcattctccaagcTGAGTTTttgtggagtgttcctttaaactttacattgtttatgtgtgtttcaCATGAGTGACAAACAGAGCTGGTGAAACAGTCCACTGTAATCACATGAATGAAGTTACACAACACTGATTTATTCACTTCAGGTGTATCTGGGTCGCGTCGTTTTTATCCTCTTGAAGTGATTCTTCTTGACTTGATCCTCGGCTTTTTGTAGATGGTTTGTCATGATGTAAGAAAGCTCAGAGCTGGAAACCAGAGAGTTGCTGCTTTCTATCTTCACGGTCAATATTCAATATACTCCTACAGATGCAAacgttaatacattttttacgaATAGTCATCTGAATGACGTACAGTTCACCGGATAAAGATGTTCTGCTCACGTGAAAGTGTCATAGAGccactgtgtgttttttcacaagccatttgtgtgtttatgtaaccAAATCTGCCATGATCAAACTTTCACAGAGTTTTAATGAAGCAATTTAATAGCGATACTGAAAACGTGGCATGGCACTAGTATTtagtttgtattaaatgtaatctGAGCGGATTGTCTCTCTTGCCAACAGATCATTTTGTACTATCGTAAATGGTTAAATGAAGTCAGTGGAGGTTGGTTAAAGGTGAAGTGAAATTGAAAACTGAGGATGCAGTGAATCTTCAATGCATCGTAATCGTGATCGAACCGAACCAGGAGACCAGTGTAGGTTCACTCTCCTAATGCTGAACTGCTAGAGTATGCTCGAGTACAGAATAGTGGAGATTTCAGAGGGCATGTGGCATCCTCAGCCACGCTTATGCAGAGAATCCGCTCTTTGACTATTGTGGTTCCCTAACCGAAGCCCCCTCGGCGTAGATACACTGCACACAGCTGGCCCAAAAATTTTTGGAACAACTCTCGTTTTGGCCGCATTTGGCCACAAGTGGAAGTGCAAGTCTTCACCAAGTACAAAATGTTCCTAAATCGAGATTCTTGT

Function

GO: NA

KEGG:

id description
ko05205 Proteoglycans in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
TU109965 True 3357 lncRNA 0.35 1 2171007 2174363

Neighbor

gene id symbol gene type direction distance location
sh3bp2 sh3bp2,LOC107667261,LOC107705055,LOC107558670,LOC107743173,LOC106568140 coding downstream 46275 2107110 ~ 2124732 (-)
vldlr vldlr,LOC107705052,LOC107548665,LOC107558669,LOC107667264 coding downstream 65718 2086121 ~ 2105289 (-)
kcnv2a kcnv2a,kcnv2,LOC107726563,LOC107667263,LOC107558705,LOC107743156,LOC108428855 coding downstream 86817 2081915 ~ 2084190 (-)
trappc13 trappc13,LOC107667267,LOC107742971,LOC107705057,LOC107726564 coding downstream 98092 2063385 ~ 2072915 (-)
nln nln,LOC107667266,LOC107548669,LOC107705053,LOC107558702,LOC107743138 coding downstream 114950 2044162 ~ 2056057 (-)
parm1 NA coding upstream 7432 2181795 ~ 2186043 (-)
si:dkey-88l16.3 LOC107667258,LOC107738845,LOC107743196,LOC107548646 coding upstream 24620 2198983 ~ 2228990 (-)
katnal2 katnal2,LOC102797751,LOC104955398,LOC107573073 coding upstream 177300 2351663 ~ 2360133 (-)
sigmar1 sigmar1,LOC107653128,LOC107573076 coding upstream 186405 2360768 ~ 2363564 (-)
tmem267 si:busm1-79m10.4,LOC107653487,LOC107702605,LOC107756535,LOC107750222,LOC107554236,LOC107554852 coding upstream 607788 2782151 ~ 2787777 (-)
LOC122352691 NA non-coding downstream 458 2169319 ~ 2170549 (-)
LOC122352693 NA non-coding downstream 3660 2166391 ~ 2167347 (-)
LOC122352694 NA non-coding downstream 8303 2162144 ~ 2162704 (-)
LOC122353011 NA non-coding downstream 294255 1869993 ~ 1876752 (-)
G74149 NA non-coding downstream 302061 1867972 ~ 1868946 (-)
G74319 NA non-coding upstream 4843 2179206 ~ 2179433 (-)
G74320 LOC107743020,LOC107663454,LOC107738849,LOC107548654,LOC107558708,LOC107667276 non-coding upstream 13305 2187668 ~ 2190158 (-)
G74306 LOC107738848,LOC107743003,LOC107558707,LOC107663452,LOC107548653 non-coding upstream 16727 2191090 ~ 2193301 (-)
G74324 NA non-coding upstream 73785 2248148 ~ 2250881 (-)
G74346 NA non-coding upstream 174972 2349335 ~ 2349691 (-)
adamts6 adamts6,LOC107744255,LOC107685101,LOC107713302 other downstream 324105 1774223 ~ 1846902 (-)
nrarpa nrarpa,nrarp other downstream 682999 1483399 ~ 1488008 (-)
G74031 NA other downstream 697129 1466751 ~ 1473878 (-)
G74058 NA other downstream 722121 1445323 ~ 1448886 (-)
si:dkeyp-41f9.4 NA other downstream 1282995 885156 ~ 888012 (-)
LOC122352692 NA other upstream 19722 2194085 ~ 2197429 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other upstream 542734 2717097 ~ 2767195 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other upstream 1162976 3337339 ~ 3377784 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other upstream 1427249 3601612 ~ 3607788 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other upstream 1731251 3905614 ~ 3912742 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G684493 NA unknown CI01180000 null 8722693 ~ 8723867 (-)
rainbow trout (Oncorhynchus mykiss) G708642 NA non-coding NC_048572.1 CM023226.2 42234805 ~ 42247568 (+)