G74596 (LOC107715844)


Basic Information

Item Value
gene id G74596
gene name LOC107715844
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3854316 ~ 3858952 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU110384
GTTGGACCCTCTGAGCCGCCCCTGTGGTCGGCTGTCTGGCGGGAACCGTCCTGCTCCTTGAGGGGCTGACAGTGGACTCTAACTGGTGAAACTTGTGCACTCTGTCCCTCACCAGAATTGAatcctcttttgttttgtagcCTAAACGTGGCCAGCCCAggtcttttttttgcattatgctATCAATCTCTGCCATCAGACGTGTCTGGGCTCGGGCTGCCTCTGCGGGGCTGTACTTATGCATGTGGACAACATCCTCATGAGGAGGTGACTCATGCTTCATGGACATCATATGGTCTGGACTGACCGGGATGGGAATATTAGCCTCAGAAGGGATGTTTCGGAACAGCTCACTACTGCCATCATCTCTGCAGTTCATGTAAGGCACAGCGCGGCTGTTGTCCATGTAGTACATGATGTAGAAGTTACACATCTCATCATTTGAGGTGCCTCTGAAAGGAAGGAAACGATGATACATGAACAAACTACTAGAACAAAGTAAAAGCTGCAGATAAGAAACCGAACTGCATTTGCCTGAAATGACACACCCACAGATCCTCTCACAACATACAACAGCAAGCTCCTATTGGGTTTCCACTTCTTTTGCAGCTTAATTAGTAAAAGGACACTAATCATGTTTGTTCTTAGAGGTACCTCTACATAAATaccacaaaaaagtaaaaacttcCTGGTTGTTTTACAT

Function

NR:

description
PREDICTED: peptidyl-glycine alpha-amidating monooxygenase B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110384 True 703 lncRNA 0.46 2 3854316 3858952

Neighbor

gene id symbol gene type direction distance location
il6st LOC107715880 coding upstream 19946 3821337 ~ 3834370 (+)
ankrd55 ankrd55,LOC107702571,LOC107670032,LOC107737049 coding upstream 35831 3808014 ~ 3818485 (+)
auh auh,LOC107720385 coding upstream 64136 3773510 ~ 3790180 (+)
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding upstream 81606 3768754 ~ 3772710 (+)
ror2 ror2,LOC107702585,LOC107683466 coding upstream 86643 3709666 ~ 3767673 (+)
st8sia4 st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405 coding downstream 24307 3883259 ~ 3891247 (+)
syk syk,LOC107715877,LOC107736968 coding downstream 53313 3912265 ~ 3935837 (+)
map3k1 map3k1,LOC107558252,LOC107670047,LOC107715839 coding downstream 101089 3960041 ~ 3999938 (+)
hmgcs1 hmgcs1,LOC107715876,LOC107737058 coding downstream 142847 4001799 ~ 4009370 (+)
tpm2 tpm2,LOC107670037,LOC107737084,LOC108276716,LOC108427282,LOC103044350,LOC108242564,LOC107572193,LOC107715874,LOC100710292,LOC106571564 coding downstream 222631 4081583 ~ 4096903 (+)
G74589 NA non-coding upstream 9804 3788757 ~ 3844512 (+)
G74585 NA non-coding upstream 85664 3768201 ~ 3768652 (+)
LOC122353153 NA non-coding upstream 266422 3587363 ~ 3587894 (+)
G74392 NA non-coding upstream 1072999 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 1137559 2716522 ~ 2716757 (+)
G74626 NA non-coding downstream 32939 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 261912 4120864 ~ 4122658 (+)
G74680 NA non-coding downstream 292506 4151458 ~ 4153279 (+)
G74681 zgc:194281,cunh5orf30,LOC107665462,LOC107740794,LOC107670048,LOC107564120,LOC107715868 non-coding downstream 296095 4155047 ~ 4160317 (+)
G74659 NA non-coding downstream 306006 4164958 ~ 4176118 (+)
cdc42se2 cdc42se2 other upstream 159720 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 186310 3663912 ~ 3668006 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other upstream 236800 3588244 ~ 3617516 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other downstream 154082 4013034 ~ 4120447 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other downstream 622315 4481267 ~ 4529002 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 1257914 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 1379327 5238279 ~ 5250137 (+)
G74965 NA other downstream 1397886 5256838 ~ 5258823 (+)

Expression


Co-expression Network