CI01000000_11587766_11588330


Basic Information

Item Value
gene id CI01000000_11587766_11588330
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 11587316 ~ 11588330 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_11587766_11588330.mRNA
GAAAATAAACAACTTTTTAAAAAGGATGCATCCTACCGAAGATCAGATTGCATCCTACATTGACAATTTCCGGGAAAAGTTATGGCCAGATGGAAACGTGCCCTACCAGCCGCCACGTGACAATTCAAACTCTCTAATCCTCAAGAAGACTGATGTGGAAACTTTGTTTAAGATATTCCAGGACACGGAGGAGAACAAGAAACTGGTTTATAGGCTGCTTTCGTATGTTCTAAGGGAGTTCCTGCCTGGAGAGCCTGCCTTTAGTTCAATAGCTAATCTAACTGTGAAGAATTGTGTTTCATAATAGAAACAGGATCTTTTATTATTTTAATAATGTGTCTAATGTTTTTAAATGTGCATTATTTAATATTTTATATGAATATTCTTCAAAGATGCATTCTGATATACCTCAGAGAGGTCATGAGCAGCATGAACACTATTGAATTTTTTTTTTTATTCAACAAAAATGTTATCCTCTGTTTGCTTTAGCTACTGTGATTATGGTTCATCTAAAAAAAATCACAATATATTGGGTGTAAATTTTAATTTTTTTTTTTTTTAAATGATCACTGTATAAGTTAACTTTTTGTTTTGTTCCTTAAAATTGTACACTGTGAATGACTGTTTTTCTGTTTTATAACCGCACAGCTTACTCAGAACAAAATAGATAGTCATTATGTTACTGATTATGTTTTTACAACAAGACTTAATACAGGGTCTGTGAGGAATGTATTTGAATAATATTGGCAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_11587766_11588330.mRNA True 754 mRNA 0.32 3 11587316 11588330

Neighbor

gene id symbol gene type direction distance location
CI01000000_11584045_11586744 UBE2A, UBE2B, UBE2AL coding downstream 334 11583971 ~ 11586982 (-)
CI01000000_11541564_11559682 INPPL1B coding downstream 27634 11541451 ~ 11559682 (-)
CI01000000_11536835_11537863 P2RY4 coding downstream 48608 11536313 ~ 11538708 (-)
CI01000000_11520786_11533683 NA coding downstream 53404 11520187 ~ 11533912 (-)
CI01000000_11515517_11516404 SOX2, SOX3 coding downstream 70880 11515352 ~ 11516436 (-)
CI01000000_11600258_11602519 SLC25A5.L, SLC25A6, SLC25A5, ANTS6 coding upstream 11652 11599982 ~ 11602580 (-)
CI01000000_11603826_11605350 SLC25A43 coding upstream 15470 11603800 ~ 11605350 (-)
CI01000000_11644676_11648034 CHIC1 coding upstream 55716 11644046 ~ 11648034 (-)
CI01000000_11650257_11652811 CDX1, CDX4 coding upstream 61574 11649904 ~ 11654726 (-)
CI01000000_11661528_11696310 NA coding upstream 72683 11661013 ~ 11696310 (-)
G8180 NA non-coding downstream 394141 11192967 ~ 11193175 (-)
G8172 NA non-coding downstream 411292 11175754 ~ 11176024 (-)
G8161 NA non-coding downstream 442343 11144751 ~ 11144973 (-)
G8155 NA non-coding downstream 452619 11134400 ~ 11134697 (-)
G8142 NA non-coding downstream 487763 11099192 ~ 11099553 (-)
G8251 NA non-coding upstream 26396 11614726 ~ 11614965 (-)
G8246 NA non-coding upstream 30524 11618854 ~ 11619745 (-)
G8253 NA non-coding upstream 31771 11620101 ~ 11620367 (-)
G8254 NA non-coding upstream 32229 11620559 ~ 11620817 (-)
G8255 NA non-coding upstream 32852 11621182 ~ 11621419 (-)
G8125 NA other downstream 546407 11040269 ~ 11040909 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other downstream 759721 10824324 ~ 10825464 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other downstream 1172803 10407395 ~ 10409950 (-)
G3931 NA other downstream 5183791 6157013 ~ 6403525 (-)
G3716 NA other downstream 5586547 6000407 ~ 6000769 (-)
G8699 NA other upstream 1696994 13272585 ~ 13311429 (-)
G9036 NA other upstream 2138470 13726800 ~ 13727090 (-)
G9602 NA other upstream 2752672 14341002 ~ 14346534 (-)
CI01000000_14200000_14436182 TENM2 other upstream 2797027 14200000 ~ 14436253 (-)
G10672 NA other upstream 4637957 16226287 ~ 16231126 (-)

Expression


Co-expression Network