G74769 (LOC108276716,LOC108427282,LOC107102752)


Basic Information

Item Value
gene id G74769
gene name LOC108276716,LOC108427282,LOC107102752
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 4081576 ~ 4532236 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU110643
CTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTCTTGATGGCCTCCATTGTTGATTTCTTGGGTTTCTGCTAGCGGCTGAGAAGAAAGAGGAGAACTTGTTCGGAGAGTGGAGGCAGAGACGGACGAAGCTGAGTGAGCAGCAGAGAGGCGGCTGGAATCCTCTCCAGAGGAACGCTGGTCTTTTTTGGAAACTTCTCTAAAGTCTCTGGGAGAGCGACGTCCCCCTGCTC
>TU110644
CCTTCTTCTCGGCCTGCTCGAGTTTCTCCTGAGCATccttcagtgattcagagtacTTGTCCAGCTCGTCCTCCACACCCTTCAGCTTCTTCTGCAGGCCCTCTTCTCGGCCTGCTCGAGTTTCTCCTGAGCATccttcagtgattcagagtacTTGTCCAGCTCGTCCTCCACACCCTTCAGCTTCTTCTGCAGGCCCAGGAGCTCCTCTtccTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTCTTGATGGCCTCCATTGTTGATTTCTTGGGTTTCTGCTAGCGGCTGAGAAGAAAGAGGAGAACTTGTTCGGAGAGTGGAGGCAGAGACGGACGAAGCTGAGTGAGCAGCAGAGAGGCGGCTGGAATCCTCTCCAGAGGAACGCTGGTCTTTTTTGGAAACTTCTCTAAAGTCTCTGGGAGAGCGACGTCCCCCTGCTC
>TU110645
CTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTCTTGATGGCCTCCATTGTTGATTTCTTGGGTTTCTGCTAGCGGCTGAGAAGAAAGAGGAGAACTTGTTCGGAGAGTGGAGGCAGAGACGGACGAAGCTGAGTGAGCAGCAGAGAGGCGGCTGGAATCCTCTCCAGAGGAACGCTGGTCTTTTTTGGAAACTTCTCTAAAGTCTCTGGGAGAGCGACGTCCCCCTGCTC
>TU110647
CTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTtgattcagagtacTTGTCCAGCTCGTCCTCCACACCCTTCAGCTTCTTCTGCAGGCCCAGGAGCTCCTCTtccagctaTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTCTTGATGGCCTCCATTGTTGATTTCTTGGGTTTCTGCTAGCGGCTGAGAAGAAAGAGGAGAACTTGTTCGGAGAGTGGAGGCAGAGACGGACGAAGCTGAGTGAGCAGCAGAGAGGCGGCTGGAATCCTCTCCAGAGGAACGCTGGTCTTTTTTGGAAACTTCTCTAAAGTCTCTGGGAGAGCGACGTCCCCCTGCTC
>TU110648
CTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTCTCTCGCTCTCATCTGCGGCCTTCTCTGCCTCCTCCAGCTTCTGTAGCGCTGTGGCGAGTCTCTCCTGGGCGCGATCCAACTCCTCTTCCACCAGCTGGATACGTCTGTTTAGAGACGCCACCTCAGCCTCGGCCTGCCATCACAGGAGAATCAGCCAATGCACACAATGCCAACCGATCCGTTGCGATCCGTTGCAAACATGAACATGCTGGATAATGCGATGGCGACATGCAATGCCAAAATCCGGAGATAAATGTCCAAGTGCAAAAATGACATCTAACCATAAATGATCTTTCTTCGTGTTGTTACGCTTCGTCAAAAAAAGTAggcatttttgaaaatcaaaaatgttattttgttgcAATCAGTACAACTCTGAAAATGTTGTTGATAAAAGTTATACCATCTAGTGTTCTCCTCAGAACAATGTGTaaattgctataaaaaaaaaaagattataacaTTAACAGAAAATGTATGCTTTGCAGAAAATGTAACACATGTATGGGAATTATAAAGCAGAAGTTCCCGTTGGAGACGCGTTGCTggctttaaagttaaaatgtaaacatgcaaAGTTCACAAGGTAAAGAGGGTCGAGCTCACTATCAGCTGTTTGCCCACTGCATTAATAGCTAACTACACGCTAGCAATGCGATTAGTGTGTTAACCCTTTCAATGTGGGAACATTCGATCGTGTCACCAAACACAGCTCAAAATGAACACGAACCGATGATCATTGTAAAGAATTCCCCCAAAACAACATGCCTGTAGCTATTAGATAACATAAGAAAATTGGCCTTCACGACAGACGTTCTTCTTCATAATCTAGCAAAACGACACTAGCTCAGTACAAAGGTGGCCTAATTTGCTTGTGGGTCGGCAGTAGGACACGCCGGTTTCTAGAGCTATTTTCACTGCAaggtaaaatatgaaaatagccCAGACAAGCCAAAACCTCATTTAAGACGTTTAAGATCTTTTTCAAGAAACGTATCAAACACATAAATGGCTTCCTACACAGTCGCATGCTAAAATCTAGAATTAACttaaaaaatggaaaacgtTTCAGCGATCTTTGACTACTTTTAGATGTAAAAACGTAAttgatgaaagaaaaatcaacTTCCAAAATCATCTTACTTATACTTTGACAAAGCTAGAATGACGTTTTATATCGCCGAGCTGGTTTTGACAGAAAACCGCACGTTCGTGTCACTTATAAGGTGTGGGAGCATCGTATCATATTCAAAACTCACAACTcgcaaaactgtttttttttttaatcagaatcGGTTTTGTTAGCCGAACGATGTTACGCTGTTCTCAATGCATTGAATGCAGTTCTGCCTCGATCatgtaaaactacatttcccatgaaATCTTCCATGACAGCTTAAATTACAGATCAGTTTTTCGTTCTTGTTcatttgtaatgcaaaaaaaattataatactgGCAGTGCAGGTGCATTTAGGTGCACGAGGGGTTGGGTAACGCAATAAACATTTCTCCAAGCTTGTGTTTATCTTCATGTAAACTACCAACACGTCTACAGAGGACAAGTACACGAAACATTTCATTCAGTCTGGTCCTGTGGGCTGATGGATATCTGCATTCAGGGCTAACCTGTTTAATTGATTTGCATCACACGCTACAGGTCCGTGTCAGAGAAAGAACTTGAttttgaagagagagagagggatgctTTAAGTCGTTAACATCACCTGCCCTCTAAATAAAAACTCTAATCCTCTTCTCACGTCCGGCGCATTAGCTCAAGTTCACCTGACGGGTCAGGAGCATTCACTCGCTTTTCACACACTGCAGACCGTACCTCAATATTGCTTCACCTGATATTTGGATAATGCGTTTTTGAAGTGAACGTTTTGGATTTACCTTAAGGAAACAGAATACATCAAAGCGCTCGCTACAAAACAGCACAACAGATGTCGACCACGAGGAGCATCATTTTACAAAACCAGAATAGAATAAACATGTTAATCGCTGGATTGTTGGGATGGGACAATATTTATCTGAGATACAGCTACTTAAAAAATCTgcaatctgaggatgcaaaatttagttttgatatatttacggaaggaaaaatatcttcatgcaaCATAacctaatatcctaatgatgCTTGGATAACTTTgacccataa
>TU110649
CCTTCTTCTCGGCCTGCTCGAGTTTCTCCTGAGCATccttcagtgattcagagtacTTGTCCAGCTCGTCCTCCACACCCTTCAGtgattcagagtacTTGTCCAGCTCGTCCTCCACACCCTTCAGCTTCTTCTGCAGGCCCAGGAGCTCCTCTtccTGTTTGCATTTGTCCTCTGCGCCTTTCTTGTCTATCTCTGCCTGTTCTGCTCGATCTATGGCATTCTCCTTGTCTAGCTTCAGCATCTGCATTTTCTTCTTGATGGCCTCCATTGTTGATTTCTTGGGTTTCTGCTAGCGGCTGAGAAGAAAGAGGAGAACTTGTTCGGAGAGTGGAGGCAGAGACGGACGAAGCTGAGTGAGCAGCAGAGAGGCGGCTGGAATCCTCTCCAGAGGAACGCTGGTCTTTTTTGGAAACTTCTCTAAAGTCTCTGGGAGAGCGACGTCCCCCTGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110643 False 374 lncRNA 0.51 2 4081576 4530616
TU110644 False 510 lncRNA 0.53 3 4081576 4532236
TU110645 False 366 lncRNA 0.50 2 4081576 4530616
TU110647 False 443 lncRNA 0.51 3 4081576 4530616
TU110648 True 2242 lncRNA 0.40 2 4086453 4530616
TU110649 False 454 lncRNA 0.52 3 4081576 4532236

Neighbor

gene id symbol gene type direction distance location
pdzph1 LOC107702580,LOC107670049,LOC107560411,LOC107558250,LOC107715841,LOC107706919,LOC107737152,LOC107579090 coding downstream 177453 3891642 ~ 3904123 (-)
pam pam,LOC107737006,LOC107670040,LOC107560403,LOC107715844,LOC107702561 coding downstream 202056 3843692 ~ 3879520 (-)
sec31a LOC107715884,LOC107702588 coding downstream 417695 3644069 ~ 3663881 (-)
tmem150c tmem150c,LOC107558260 coding downstream 455793 3617515 ~ 3625783 (-)
hnrnpdl hnrnpdl,hnrpdl,LOC107715891,LOC107702595,LOC107731491,LOC107653490 coding downstream 469293 3607967 ~ 3612283 (-)
LOC122352396 tln1,LOC107715875,LOC107670039 coding upstream 58052 4590288 ~ 4627041 (-)
LOC122353167 wrn,LOC107715857,LOC107573262,LOC107758726 coding upstream 291228 4823464 ~ 4867579 (-)
ubxn8 ubxn8,LOC107715867 coding upstream 373645 4905881 ~ 4911182 (-)
LOC122352400 gmip,LOC107672475,LOC107670530,LOC107757342,LOC107587992,LOC107711163 coding upstream 468448 5000684 ~ 5017151 (-)
LOC122352563 pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 coding upstream 497069 5029305 ~ 5031460 (-)
G74737 NA non-coding downstream 72202 4007230 ~ 4009374 (-)
G74742 NA non-coding downstream 81789 3997901 ~ 3999787 (-)
G74739 map3k1,LOC107670047,LOC107737160,LOC107702559,LOC107715839,LOC107558252 non-coding downstream 88142 3992187 ~ 3993434 (-)
G74615 NA non-coding downstream 249484 3831602 ~ 3832092 (-)
G74624 NA non-coding downstream 253548 3827125 ~ 3828028 (-)
G74819 NA non-coding upstream 147467 4679703 ~ 4680232 (-)
G74846 NA non-coding upstream 306981 4839217 ~ 4840661 (-)
G74858 ppp2cb,zgc:56064,LOC105021738,LOC107758729,LOC107728270 non-coding upstream 359358 4891594 ~ 4897087 (-)
G74861 NA non-coding upstream 371741 4903977 ~ 4904469 (-)
G74869 NA non-coding upstream 394969 4927205 ~ 4927617 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 168834 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 473788 3601612 ~ 3607788 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other downstream 703792 3337339 ~ 3377784 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other downstream 1314381 2717097 ~ 2767195 (-)
LOC122352692 NA other downstream 1884147 2194085 ~ 2197429 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other upstream 487071 5019307 ~ 5028513 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other upstream 2005886 6538122 ~ 6540973 (-)
sprn2 LOC107578968,LOC107720715 other upstream 2096189 6628425 ~ 6631188 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other upstream 2645088 7177324 ~ 7180821 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 2991958 7524194 ~ 7528558 (-)

Expression


Co-expression Network