G74858 (ppp2cb,zgc:56064,LOC105021738,LOC107758729,LOC107728270)


Basic Information

Item Value
gene id G74858
gene name ppp2cb,zgc:56064,LOC105021738,LOC107758729,LOC107728270
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 4891594 ~ 4897087 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU110793
GCAGCTTTCAGAGTATTCTAAGGATGGCTCTAATGATAGCTTGACTCTCAtaaaagaagttaaaaaaagaagcattcCTCACCTGCCCATCCACCAGAGCTGTGAGGGGTAGGTAGTCAAACAGGTCTGTGAAATATTTCCAGACGTTTGCATTGCCATATTTCCTCAAGCACTCGTCATAGAAGCCGTAAACTTGTGTGATCTGTCTGCTCTCGTGGTTTCCCCGCAATATCGTGATGCGTTCTGGGTATGTACCTTTAGTGCAACAAGAAGTGAGACTGTTTCCACCGAGTAATATCCTCTGTCTACATAGTCGCCCATAAACAGGTAGTTAGTGTCAGGTGACTTTCCTCCAATTCTGAAGAGCTCCATTAGATCATGAAACTGGCCATGCACATCTCCACACACTGTGACAGGGCACCGCACCTCCTGCACATTGGACTCTTTAGTGAGAATCTCTTTACCTTCTCGCAGAGTGTTCTCACTTGGTTCTCGGTAAGCTGTTTGCACTCGTTTAGCTGTTCGACCCATTGGTCTAATTCTTTGGTGAACGCTTTATCATCCATCACCGGCGCGATGCTGCGGTAATTCTCGCCGATTCTCCGGTAATTAAACGAGAGCTGCGCTGGGCCGACACAAAACACAACCACCAAACACCGCCGTTAAACTTGGATATCAGCTCATCAAACACGAAACGACGTATGACAGCTATTTTTCATCTACACTTCACGGTGACTGAGATATGTCTTTTGACGGTGTCCGCGGTGTGCGATTGGCGATTTTTCCGTTGACTAGACGCGCTCCCGACCTTCCTCACAAACGCGTTGCTGTGTAATGGCCGCTG
>TU110794
GCAGCTTTCAGAGTATTCTAAGGATGGCTCTAATGATAGCTTGACTCTCAtaaaagaagttaaaaaaagaagcattcCTCACCTGCCCATCCACCAGAGCTGTGAGGGGTAGGTAGTCAAACAGGTCTGTGAAATATTTCCAGACGTTTGCATTGCCATATTTCCTCAAGCACTCGTCATAGAAGCCGTAAACTTGTGTGATCTGTCTGCTCTCGTGGTTTCCCCGCAATATCGTGATGCGTTCTGGGTAGCGAACCTTTTAGTGCAACAAGAAGTGAGACTGTTTCCACCGAGTAATATCCTCTGTCTACATAGTCGCCCATAAACAGGTAGTTAGTGTCAGGTGACTTTCCTCCAATTCTGAAGAGCTCCATTAGATCATGAAACTGGCCATGCACATCTCCACACACTGTGACAGGGCACCGCACCTCCTGCACATTGGACTCTTTAGTGAGAATCTCTTTAGCCCTTCTCGCAGAGTGTTCTCACTTGGTTCTCGGTAAGCTGTTTGCACTCGTTTAGCTGTTCGACCCATTGGTCTAATTCTTTGGTGAACGCTTTATCATCCATCACCGGCGCGATGCTGCGGTAATTCTCGCCGATTCTCCGGTAATTAAACGAGAGCTGCGCTGGGCCGACACAAAACACAACCACCAAACACCGCCGTTAAACTTGGATATCAGCTCATCAAACACGAAACGACGTATGACAGCTATTTTTCATCTACACTTCACGGTGACTGAGATATGTCTTTTGACGGTGTCCGCGGTGTGCGATTGGCGATTTTTCCGTTGACTAGACGCGCTCCCGACCTTCCTCACAAACGCGTTGCTGTGTAATGGCCGCTG

Function

symbol description
ppp2cb Predicted to enable protein serine phosphatase activity and protein threonine phosphatase activity. Orthologous to human PPP2CB (protein phosphatase 2 catalytic subunit beta).

NR:

description
serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110793 False 844 lncRNA 0.47 3 4891594 4897087
TU110794 True 848 lncRNA 0.48 3 4891594 4897087

Neighbor

gene id symbol gene type direction distance location
LOC122353167 wrn,LOC107715857,LOC107573262,LOC107758726 coding downstream 24015 4823464 ~ 4867579 (-)
LOC122352396 tln1,LOC107715875,LOC107670039 coding downstream 264553 4590288 ~ 4627041 (-)
nrg1 nrg1,LOC107575152,LOC107681480 coding downstream 483657 4358660 ~ 4407937 (-)
sh2d4a sh2d4a,LOC107715862,LOC107665475,LOC107740790,LOC107564121 coding downstream 641651 4241301 ~ 4249943 (-)
ppip5k2 ppip5k2 coding downstream 690206 4167022 ~ 4201388 (-)
ubxn8 ubxn8,LOC107715867 coding upstream 8794 4905881 ~ 4911182 (-)
LOC122352400 gmip,LOC107672475,LOC107670530,LOC107757342,LOC107587992,LOC107711163 coding upstream 103597 5000684 ~ 5017151 (-)
LOC122352563 pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 coding upstream 132218 5029305 ~ 5031460 (-)
LOC122352871 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494,LOC107567230 coding upstream 152911 5049998 ~ 5053764 (-)
ywhah ywhah,LOC107562560,LOC107713377,LOC107688000,LOC107555530 coding upstream 351073 5248160 ~ 5252719 (-)
G74846 NA non-coding downstream 50933 4839217 ~ 4840661 (-)
G74819 NA non-coding downstream 211362 4679703 ~ 4680232 (-)
G74803 LOC107715875,LOC107737170,LOC107568645,LOC107670039,LOC107702558 non-coding downstream 380652 4510546 ~ 4510942 (-)
G74762 tln1,LOC107702558,LOC107715875,LOC107568645 non-coding downstream 394936 4495060 ~ 4496658 (-)
G74796 NA non-coding downstream 526836 4363404 ~ 4364758 (-)
G74861 NA non-coding upstream 6890 4903977 ~ 4904469 (-)
G74869 NA non-coding upstream 30118 4927205 ~ 4927617 (-)
G74915 NA non-coding upstream 64483 4961570 ~ 4962233 (-)
G74935 NA non-coding upstream 161427 5058514 ~ 5059679 (-)
G74936 LOC107567234,LOC107670466,LOC107757355,LOC107672456,LOC107711241,LOC107588012 non-coding upstream 163513 5060600 ~ 5061090 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 978852 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 1283806 3601612 ~ 3607788 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other downstream 1513810 3337339 ~ 3377784 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other downstream 2124399 2717097 ~ 2767195 (-)
LOC122352692 NA other downstream 2694165 2194085 ~ 2197429 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other upstream 122220 5019307 ~ 5028513 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other upstream 1641035 6538122 ~ 6540973 (-)
sprn2 LOC107578968,LOC107720715 other upstream 1731338 6628425 ~ 6631188 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other upstream 2280237 7177324 ~ 7180821 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 2627107 7524194 ~ 7528558 (-)

Expression


Co-expression Network