G75007


Basic Information

Item Value
gene id G75007
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5456371 ~ 5458861 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU111012
GGACTTATTCTGTTGTTGTATATGGTgattaaaagctattaaaacaCAAGATTTACTATACTGTTTTTGAAGGTCACAGTCTtcattaataatgaaacaagACTCAGAAATTAATTCAGATTGTTTCATTGTCACCAATAAATGAATTAGatggtttattttcacattagaGCAAAAAACAAACTCTCATGCTTCAGGCGTCTCCATCATTCATACATCTACTATTTCACTTGAGATTACAGTAGAACACTTCTAgtttagatattagaaaaaaaaaaaaagtgaaaattctatCAAGCGCATTAAACTGCGGTTGGGTTTTATCATGATGCTTTAACTCGAAACATAAGCAGAGTATTGTCAAACACCaagaaaatgcacttttttttagtaTACTAGTGAATATCTGAGATTTCAATGTGATGTTTAAACGAAATGACAGAAAACAATGAATGTGCTTAACAACCATATTAATGATGGGTGGACAGTAATTTAAATCTACTAGGAATAAATTAACTTATTTTTGGGAAATGGAAAAAGATATGACACTTGGATATTTGTATGCATTAAGGAGCAAAATGAGTGTAGTTATGCTCTATTAGCAAATTACATAATTTCAACCCACACCTTTTTTTCCCAAACTGAGGTCCAAATCAAAACTACCTGTGGTCATTGACAACATGCCACAAATGTTGTCAATAGAGCATAACCTCTATAAAGGTGGACTATTCCTTAATAACAATACCCTTTGACTGATcactttaaacaatattttaaacatgaaacaaaatcatATTGCCATAGCTTTAAAAATGAGATGTAAACAATGCAGTGCTATCTAGGGGTTTAACATGCACAAATGTATTTAGGCCACATGTTTTTGTGAACTAACAAAATGGTGTGAcaaatactaaattaataaagGACAAACACTTAACACAAAAGGGCAAATTAACAATTTCTTGTGGAACAAAAGCAAATAGGACATTGATGTTTACTTACACTTTCAATAGAGAGCAGATATTCAAAACAGAAACTCACATGGTTGATTATATGGACGTCATAATCAACTAACTCGGACCATTCACGTTTTAAGTGcaacaattttaaattatgccTGTTTAGTTACCAATCatgtaacaaaaatgtcatGACATTATCGCTTCATTCAAACAGAGGACATCTGGATATCATAAACGAGTATAGATTTGCACACATCCACCAAATAAAGCCTGACTTTGAGATTTGGAAgatccattttcattttaaatgtttctctgCAAAGACCATAAGCCAGAAATGTACCTTGTACATGTACCTTAGATGATTTACATACTTTTTCCCACTGACATGTTACTGTATGTATAATTTCACTGATGTTATGACACGAGTATGAAATGAAGGTCAAACGATGGAATGGAGACCCAACAGGACAAGAATTTTTGTTTATGTCTGCAAGTTGTATAAAGTCGATGTAATCTGCATCAACAAGCCAGGTGTGACTGTAccaattttttctttgttgcagtataaacatatataacacACAATCCCATCAGAGTGGATTCCCAATCACAAAACAcacccacttttttttttgcacttgcaCAAAATCCATCCTGCGACGAGTTTGTAGGCCGACTTACGCACCGTCTTCCAATGTCATTACAACATCGAATCACAGTGTCCTCACTTGTTAAGAGTTCAGAGTAGAAAAGATGTTTTAGACTTCAAACAGCCCTCTTGAGCGCATGAGGAAGCAGAGCCTGATCGTGAGGATGCTGCGGTTGGCATAAGACACAGTCTTGgttttcctgttgttttctcAGCATCTCAACATGATCGAATCTGATGATCATGATGTAAATGCGGAGTGAAAACTGCTTTGGCAGGAGAATCTACAATTAACAAATGGCATTATTTTGGCTCACCTCAACAGATGTACCCTTACAGAAAGAGGAAGCAAACTAAATCGGGGATGAGTGTGCTCAGTATGTGTTTGTACAAGACTGGTCAATGGCCTAGATCACTTCGGGAACAGATGGTTCTTTGTGGCTTCAATTAATGACctttgtagcaaaaaaaaaattgggtcATTTTTACCATAGTATATCAAACGCTGCGCCCAGTCGCTCAGGCGTAGATCTGACTCGGGCCTCCGGTGTGAGCGTTGTCAGCTAGTCGTTCTTGGGTAGGTTGGATAGGTTTTACGAAGCTGACGTAGTCGTGGACACCGACATCCATGTTTTTAGCTCTGAGAGCTGCGGTGTGAAGCTTCTCCAGGAAGTCTGGCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111012 True 2296 lncRNA 0.36 2 5456371 5458861

Neighbor

gene id symbol gene type direction distance location
drg1 drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524,LOC107687909 coding upstream 4416 5447331 ~ 5451955 (+)
kcnn2 si:dkey-76p7.5,kcnn2,LOC106564970,LOC107687918,LOC107686472,LOC107567448,LOC106563202 coding upstream 9935 5411683 ~ 5446436 (+)
sppl3 sppl3 coding upstream 98916 5333010 ~ 5357455 (+)
LOC122352997 LOC107711241,LOC107672456,LOC107588012,LOC107670466,LOC107757355,LOC107567234 coding upstream 388834 5058497 ~ 5067537 (+)
si:dkey-210j14.3 LOC107672496,LOC107757375,LOC107711244,LOC107711245 coding upstream 407222 5046251 ~ 5049149 (+)
slc20a1b LOC107686476,LOC107744132,LOC107687859,LOC107713386,LOC107555522 coding downstream 6096 5464957 ~ 5477005 (+)
pigo pigo,LOC107713385,LOC107686475,LOC107744133,LOC107687847 coding downstream 23904 5482765 ~ 5491729 (+)
phf24 phf24,LOC107677982,LOC107713387,LOC107744162 coding downstream 60307 5519168 ~ 5545588 (+)
prkab1a prkab1a,prkab1,LOC107713388,LOC107555518,LOC103357303 coding downstream 89844 5548705 ~ 5553640 (+)
ppp2r2ab ppp2r2ab,LOC107744137,LOC107720666,LOC107678035,LOC107560523,LOC107687801 coding downstream 433742 5892603 ~ 5906876 (+)
G74992 NA non-coding upstream 70516 5383139 ~ 5385855 (+)
G74958 NA non-coding upstream 220416 5235599 ~ 5235955 (+)
G74914 NA non-coding upstream 348257 5107785 ~ 5108114 (+)
G74908 NA non-coding upstream 357807 5097644 ~ 5098564 (+)
G74906 NA non-coding upstream 368780 5087280 ~ 5087591 (+)
G75067 NA non-coding downstream 104842 5563703 ~ 5638236 (+)
G75076 NA non-coding downstream 184028 5642889 ~ 5643101 (+)
G75077 NA non-coding downstream 184688 5643549 ~ 5643766 (+)
G75081 NA non-coding downstream 198498 5657359 ~ 5663075 (+)
G75083 NA non-coding downstream 204296 5663157 ~ 5722027 (+)
G74965 NA other upstream 197548 5256838 ~ 5258823 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other upstream 206234 5238279 ~ 5250137 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other upstream 332998 5116866 ~ 5123373 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other upstream 927369 4481267 ~ 4529002 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other upstream 1335924 4013034 ~ 4120447 (+)
ccl19b LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257 other downstream 39786 5498647 ~ 5500388 (+)
G75062 LOC107744182,LOC107678054,LOC107567441,LOC107713390,LOC107687817 other downstream 101790 5560651 ~ 5562085 (+)
lrrtm4l1 lrrtm4l1,LOC107730422,LOC107553720,LOC107687748,LOC107720738,LOC107561403 other downstream 602330 6061191 ~ 6089587 (+)
LOC122352486 LOC107720590,LOC107677990,LOC107553711,LOC107705075,LOC107586209 other downstream 995204 6454065 ~ 6472107 (+)
trpc7a trpc7a,LOC107677994,LOC107720592,LOC107552051,LOC105905985,LOC108437819,LOC106603261 other downstream 1522631 6981492 ~ 6993621 (+)

Expression


Co-expression Network