ccl19b (LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257)


Basic Information

Item Value
gene id ccl19b
gene name LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5498647 ~ 5500388 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU111017
GCAAATATCTGCTGAGCACAGGTGAACGAACACACACGGAAGGACAAAATGATGTTCTCTAACAGACTTCTCTTATGGACAGGTGCTCTGCTCATATTGAGCGTCAGTCTATGGAGCTGCACTACAGCTCAGAACGATGGTGCAGCGGATTGTTGTTTAACCACCAGTGACCGGCGAATCCCGAAGAAGGTGGTGACGTCCTTCATCGTTCAGACCGGCGATGGAGCCTGCAGAATTCCTGCCACTATATTTGTCACAAAGAAGGGCTTGAAGCTCTGTGCACCGTTTCCGAGTGAGAGTAACTGGGTGAGCAAACTGATCGACTATATACTAGCAGGACCTGTATCCAAACCTAGAGGAAAGAAGCATAGACAACAGTAAATGCCACCATGGCAGATCGTGCAGGTCCTGCCTGCTCTCACTTTACACGCGTGAACGGGACTGGTCCTGGAACAGATACAACCTGATATTACTTACCCTTAATAGTAAACGCTCATTCTCAGGTTTGCTACGTGAGCACTCTAGTGGAGCAGGTCAAGTGTGAATCGTACCGTCGTAACAATAAGCTTTACAAGATATGAACCGTTTTTGAAATGTGAACCCTTCCCCAACTGCACTACATGAAGAGATTTTAAGCTAACTAGTTTCTCGTTTCCATCACTTGTTGCTGAGTTTGTATTCTGTCTGCTTTTGCAAAATGAACGTGTCTCCT
>XM_043250000.1
AGCAGCGTATAAAAGGCGTGCAAGCAGCGGTGAGGCAAATATCTGCTGAGCACAGGTGAACGAACACACACGGAAGGACAAAATGATGTTCTCTAACAGACTTCTCTTATGGACAGGTGCTCTGCTCATATTGAGCGTCAGTCTATGGAGCTGCACTACAGCTCAGAACGATGGTGCAGCGGATTGTTGTTTAACCACCAGTGACCGGCGAATCCCGAAGAAGGTGGTGACGTCCTTCATCGTTCAGACCGGCGATGGAGCCTGCAGAATTCCTGCCACTATATTTGTCACAAAGAAGGGCTTGAAGCTCTGTGCACCGTTTCCGAGTGAGAGTAACTGGGTGAGCAAACTGATCGACTATATACTAGCAGGACCTGTATCCAAACCTAGAGGAAAGAAGCATAGACAACAGTAAATGCCACCATGGCAGATCGTGCAGGTCCTGCCTGCTCTCACTTTACACGCGTGAACGGGACTGGTCCTGGAACAGATACAACCTGATATTACTTACCCTTAATAGTAAACGCTCATTCTCAGGTTTGCTACGTGAGCACTCTAGTGGAGCAGGTCAAGTGTGAATCGTACCGTCGTAACAATAAGCTTTACAAGATATGAACCGTTTTTGAAATGTGAACCCTTCCCCAACTGCACTACATGAAGAGATTTTAAGCTAACTAGTTTCTCGTTTCCATCACTTGTTGCTGAGTTTGTATTCTGTCTGCTTTTGCAAAATGAACGTGTCTCCTGagccactgaaaaaaaagttagttttctatttttttactttgtattttagaatataaataaaagcttttacgTTTGAAATATGA

Function

NR:

description
PREDICTED: C-C motif chemokine 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111017 False 712 TUCP 0.46 4 5498681 5500304
XM_043250000.1 True 830 mRNA 0.44 4 5498647 5500388

Neighbor

gene id symbol gene type direction distance location
pigo pigo,LOC107713385,LOC107686475,LOC107744133,LOC107687847 coding upstream 6918 5482765 ~ 5491729 (+)
slc20a1b LOC107686476,LOC107744132,LOC107687859,LOC107713386,LOC107555522 coding upstream 21642 5464957 ~ 5477005 (+)
drg1 drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524,LOC107687909 coding upstream 46692 5447331 ~ 5451955 (+)
kcnn2 si:dkey-76p7.5,kcnn2,LOC106564970,LOC107687918,LOC107686472,LOC107567448,LOC106563202 coding upstream 52211 5411683 ~ 5446436 (+)
sppl3 sppl3 coding upstream 141192 5333010 ~ 5357455 (+)
phf24 phf24,LOC107677982,LOC107713387,LOC107744162 coding downstream 18780 5519168 ~ 5545588 (+)
prkab1a prkab1a,prkab1,LOC107713388,LOC107555518,LOC103357303 coding downstream 48317 5548705 ~ 5553640 (+)
ppp2r2ab ppp2r2ab,LOC107744137,LOC107720666,LOC107678035,LOC107560523,LOC107687801 coding downstream 392215 5892603 ~ 5906876 (+)
bnip3lb bnip3lb,LOC107560522,LOC107678042,LOC107744138,LOC107687791,LOC107561399,LOC107720674 coding downstream 407625 5908013 ~ 5918050 (+)
dpysl2b dpysl2,dpysl2b,LOC107678023,LOC107560521,LOC107687778,LOC100705567,LOC108277094,LOC103362090,LOC108427246 coding downstream 420771 5921159 ~ 5942002 (+)
G75007 NA non-coding upstream 39786 5456371 ~ 5458861 (+)
G74992 NA non-coding upstream 112792 5383139 ~ 5385855 (+)
G74958 NA non-coding upstream 262692 5235599 ~ 5235955 (+)
G74914 NA non-coding upstream 390533 5107785 ~ 5108114 (+)
G74908 NA non-coding upstream 400083 5097644 ~ 5098564 (+)
G75067 NA non-coding downstream 63315 5563703 ~ 5638236 (+)
G75076 NA non-coding downstream 142501 5642889 ~ 5643101 (+)
G75077 NA non-coding downstream 143161 5643549 ~ 5643766 (+)
G75081 NA non-coding downstream 156971 5657359 ~ 5663075 (+)
G75083 NA non-coding downstream 162769 5663157 ~ 5722027 (+)
G74965 NA other upstream 239824 5256838 ~ 5258823 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other upstream 248510 5238279 ~ 5250137 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other upstream 375274 5116866 ~ 5123373 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other upstream 969645 4481267 ~ 4529002 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other upstream 1378200 4013034 ~ 4120447 (+)
G75062 LOC107744182,LOC107678054,LOC107567441,LOC107713390,LOC107687817 other downstream 60263 5560651 ~ 5562085 (+)
lrrtm4l1 lrrtm4l1,LOC107730422,LOC107553720,LOC107687748,LOC107720738,LOC107561403 other downstream 560803 6061191 ~ 6089587 (+)
LOC122352486 LOC107720590,LOC107677990,LOC107553711,LOC107705075,LOC107586209 other downstream 953677 6454065 ~ 6472107 (+)
trpc7a trpc7a,LOC107677994,LOC107720592,LOC107552051,LOC105905985,LOC108437819,LOC106603261 other downstream 1481104 6981492 ~ 6993621 (+)
G75422 pcdh1a6,LOC107677970,LOC107552011,LOC107677969,LOC107742394,LOC107720565,LOC107586182,LOC107742396 other downstream 1641905 7142293 ~ 7150581 (+)

Expression


Co-expression Network