G75067


Basic Information

Item Value
gene id G75067
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5563703 ~ 5638236 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU111104
cggctattctgcagatttttttccaccgctaggggcgctctaactggaattagaatcaaaactaagacaaaataaatgcaaagaagaatacgctagttcctctttagcagatataagtcggtagaagcggatagaaggacgacaaattaccaatcctgtcaaactctatcttttcaaatcctcaccccttcatcatggaacccacacgaagaagttcgtatgatgcaagttttaagttgaaggccaTCGATCTCGCGATACAAGAAGCTTAGCGTCAATGAGTCTATGGtgagacgctggaggaggcCGCGGGAAGAGCGTTTTAATCTGCAAAGTTGCTGCCGTGTTAAAATACAGCAGCATGCAGAGCTGTGGTCATCACGGAGGAGCGTATTGCTTTCGAGTTCATAAAGCAACAGAAAAGAGAG
>TU111105
cggctattctgcagatttttttccaccgctaggggcgctctaactggaattagaatcaaaactaagacaaaataaatgcaaagaagaatacgctagttcctctttagcagatataagtcggtagaagcggatagaaggacgacaaattaccaatcctgtcaaactctatcttttcaaatcctcaccccttcatcatggaacccacacgaagaagttcgtatgatgcaagttttaagttgaaggccaTCGATCTCGCGATACAAGAAGCTTAGCGTCAATGAGTCTATGGtgagacgctggaggaggcCGCGGGAAGAGCGTTTTAATCTGCAAAGTTGCTGCCGTGTTAAAATACAGCACGCGCTGCCCTGAGTGATACTGTATGGAGCTGCTATCCATCTCGTGCTTTTGGGATCCAGACAGTCGGCAAGTGGCGAAGTTTTGGGGTCATGGGGAGGTAGTGCCACGTTTCACCAGGATCCCACAAACAAGACGGGAGATGGCgttaaatgttttgtgattgGCCAAATTCTGGGGAACTCTG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU111104 False 428 lncRNA 0.44 2 5563703 5606701
TU111105 True 544 lncRNA 0.47 2 5563703 5638236

Neighbor

gene id symbol gene type direction distance location
prkab1a prkab1a,prkab1,LOC107713388,LOC107555518,LOC103357303 coding upstream 10063 5548705 ~ 5553640 (+)
phf24 phf24,LOC107677982,LOC107713387,LOC107744162 coding upstream 18115 5519168 ~ 5545588 (+)
pigo pigo,LOC107713385,LOC107686475,LOC107744133,LOC107687847 coding upstream 71974 5482765 ~ 5491729 (+)
slc20a1b LOC107686476,LOC107744132,LOC107687859,LOC107713386,LOC107555522 coding upstream 86698 5464957 ~ 5477005 (+)
drg1 drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524,LOC107687909 coding upstream 111748 5447331 ~ 5451955 (+)
ppp2r2ab ppp2r2ab,LOC107744137,LOC107720666,LOC107678035,LOC107560523,LOC107687801 coding downstream 254367 5892603 ~ 5906876 (+)
bnip3lb bnip3lb,LOC107560522,LOC107678042,LOC107744138,LOC107687791,LOC107561399,LOC107720674 coding downstream 269777 5908013 ~ 5918050 (+)
dpysl2b dpysl2,dpysl2b,LOC107678023,LOC107560521,LOC107687778,LOC100705567,LOC108277094,LOC103362090,LOC108427246 coding downstream 282923 5921159 ~ 5942002 (+)
tmem230a tmem230,tmem230a,LOC107677999,LOC107744140,LOC103035677,LOC108427245 coding downstream 316875 5955111 ~ 5956835 (+)
igsf9a igsf9a,LOC107744139,LOC107678046,LOC107720681,LOC107687761,LOC107561402,LOC107560520 coding downstream 320603 5958839 ~ 5984926 (+)
G75007 NA non-coding upstream 104842 5456371 ~ 5458861 (+)
G74992 NA non-coding upstream 177848 5383139 ~ 5385855 (+)
G74958 NA non-coding upstream 327748 5235599 ~ 5235955 (+)
G74914 NA non-coding upstream 455589 5107785 ~ 5108114 (+)
G74908 NA non-coding upstream 465139 5097644 ~ 5098564 (+)
G75076 NA non-coding downstream 4653 5642889 ~ 5643101 (+)
G75077 NA non-coding downstream 5313 5643549 ~ 5643766 (+)
G75081 NA non-coding downstream 19123 5657359 ~ 5663075 (+)
G75083 NA non-coding downstream 24921 5663157 ~ 5722027 (+)
G75097 NA non-coding downstream 268943 5907179 ~ 5907527 (+)
G75062 LOC107744182,LOC107678054,LOC107567441,LOC107713390,LOC107687817 other upstream 1618 5560651 ~ 5562085 (+)
ccl19b LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257 other upstream 63315 5498647 ~ 5500388 (+)
G74965 NA other upstream 304880 5256838 ~ 5258823 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other upstream 313566 5238279 ~ 5250137 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other upstream 440330 5116866 ~ 5123373 (+)
lrrtm4l1 lrrtm4l1,LOC107730422,LOC107553720,LOC107687748,LOC107720738,LOC107561403 other downstream 422955 6061191 ~ 6089587 (+)
LOC122352486 LOC107720590,LOC107677990,LOC107553711,LOC107705075,LOC107586209 other downstream 815829 6454065 ~ 6472107 (+)
trpc7a trpc7a,LOC107677994,LOC107720592,LOC107552051,LOC105905985,LOC108437819,LOC106603261 other downstream 1343256 6981492 ~ 6993621 (+)
G75422 pcdh1a6,LOC107677970,LOC107552011,LOC107677969,LOC107742394,LOC107720565,LOC107586182,LOC107742396 other downstream 1504057 7142293 ~ 7150581 (+)
LOC122352414 pcdh1a3,zgc:123181,pcdh1a4,LOC107742396,LOC107552012,LOC107586180,LOC107720566,LOC107720564 other downstream 1515350 7153586 ~ 7163223 (+)

Expression


Co-expression Network