G75433


Basic Information

Item Value
gene id G75433
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7078555 ~ 7079365 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU111667
ATCGAACATGTCCGACTGGCTGAGCTCCGTCTTGAAATCGGCCGATCCGGCGAGAACCAGTCCTGCCACGTTGACCTTGTCATTGGACACGAAGAGCTGCACAGCCGTCTCCGCTACCTTACGCACATAGTTGTGTCTCTTCTCCATCCTCAAACGTGCAAATCGAAGAGCGGACTGTCCTCCTCTACCTAGATTTTTTAGGCAGGTCCACAGTAAATTTGTGCAACACCTCCCTTGTGTTGCCTTGTAAAGTCCCAAACAGGGCGCCACTACCATCAATCACAATGAAGCCGAACTTGCTGTCGTCTGACAGCAGAGCTGTTAGAGCCTgtggataaaacaaaaaaaaattatattaggtGTTACATTGTTTTAGTACATAACATAGAccgagcagacagacagatcttACCTCAGTATGGAACTTATTGTCACATAAATACAAGGATgtgttgattggtttaaaaggCTCGAAATCAATGTTTACTTTCTTCTCTTTGCCTTCCTCTGTCACTATGGTGCCACAATACACCACCAGGCCATTAGGAGGCACTGCAAGATAAACAAGATTTACAAGAGGGGGATCAGGAGAGACCACACCTATTGAAAAGATTAAATCAGGCGCAACGCCCAGTCGTACCCACACATACATGGCAAATATATAGAAAGGacagtttaatgtttaaacCGCACCATTTCGGAAAAGATAAATATACCAAGTGCAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111667 True 727 lncRNA 0.44 2 7078555 7079365

Neighbor

gene id symbol gene type direction distance location
LOC122353004 LOC107552052,LOC107677992 coding downstream 18794 7057711 ~ 7059761 (-)
avd LOC107552052,LOC107677992 coding downstream 101175 6975201 ~ 6977380 (-)
pcdh1a LOC107564544,LOC107678039,LOC107708655,LOC107720713,LOC107586135,LOC108437809 coding downstream 272144 6734920 ~ 6806411 (-)
kcnip3b kcnip3,kcnip3b,LOC107572711,LOC107678047,LOC107720714,LOC107687448,LOC108233759,LOC101482209,LOC108264878,LOC106535652 coding downstream 415717 6640993 ~ 6662838 (-)
rassf2b LOC107720572,LOC107708653,LOC107687490,LOC107586133,LOC107678048 coding downstream 440148 6631681 ~ 6638407 (-)
fgf18b fgf18b,LOC107552074,LOC107742373,LOC107687415,LOC108437818 coding upstream 15280 7094645 ~ 7102080 (-)
LOC122352679 LOC107720699,LOC107552063,LOC107742368,LOC107687282,LOC107586145,LOC107678013 coding upstream 310805 7390170 ~ 7414303 (-)
LOC122352681 NA coding upstream 336028 7415393 ~ 7425751 (-)
parp14rs4 LOC107720697,LOC107552062,LOC107678011,LOC107552063,LOC107678013,LOC107677959,LOC107742382 coding upstream 348471 7427836 ~ 7441824 (-)
tlx3b tlx3b,LOC107742409,LOC107586149,LOC107676002,LOC105024610,LOC107552047 coding upstream 411196 7490561 ~ 7496338 (-)
G75366 NA non-coding downstream 429885 6645924 ~ 6648670 (-)
G75294 NA non-coding downstream 696114 6380936 ~ 6382441 (-)
G75297 NA non-coding downstream 725671 6352535 ~ 6352884 (-)
G75209 NA non-coding downstream 801225 6272225 ~ 6277330 (-)
G75191 NA non-coding downstream 922779 6148920 ~ 6155776 (-)
G75445 NA non-coding upstream 28393 7107758 ~ 7231920 (-)
G75459 pcdh1a3,pcdh1a4,pcdh1a6,LOC107552014,LOC107720569,LOC107720570,LOC107742396,LOC107586180,LOC107677970,LOC107742394,LOC107742395,LOC107678002 non-coding upstream 48223 7127588 ~ 7148979 (-)
G75460 pcdh1a3,zgc:123181,LOC107742396,LOC107552012,LOC107586180,LOC107720564,LOC107720566 non-coding upstream 66616 7145981 ~ 7154097 (-)
G75463 pcdh1a4,pcdh1a3,pcdh1a6,LOC107742396,LOC107586180,LOC107677970 non-coding upstream 74783 7154148 ~ 7159460 (-)
G75465 pcdh1a4,pcdh1a3,LOC107678002,LOC107742395,LOC107742371,LOC107552069,LOC107677970,LOC107742396,LOC107586180,LOC107552012,LOC107720566 non-coding upstream 78666 7158031 ~ 7170618 (-)
sprn2 LOC107578968,LOC107720715 other downstream 447367 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 537582 6538122 ~ 6540973 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other downstream 2050042 5019307 ~ 5028513 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 3165813 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 3470767 3601612 ~ 3607788 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other upstream 97959 7177324 ~ 7180821 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 444829 7524194 ~ 7528558 (-)
G75562 LOC107675999,LOC107720693,LOC107677996,LOC107552059 other upstream 451496 7530861 ~ 7544090 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 771656 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 780857 7860222 ~ 7860303 (-)

Expression


Co-expression Network