G75445


Basic Information

Item Value
gene id G75445
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7107758 ~ 7231920 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU111681
tttttttttttttttttacTACTTATGAAAGAAAActttatttgtgatttataaacaaaacacattaccAGATTtcataaagtaatataaaataataaacaccaTTACACTGATGAGCAGGTGTACAAAAATTTTGTCCAACAGATTCGCACTGTCAAAGTCAAAAGCATAGTGCCACTTAGGCACTGGATGAATTGATATATAATTACTACACACAAGCAGAATACATATAcctttttatttcctgttttatcttttttttatttttatttttttatttttttattttataatttttttttttagagggaGAGGTTTATATCATAGGGTAGAATGAACTGGCTCACATTACAGTGTTATTGATTTCAAAGCCTAGCACAAAACGAAGGATTGATCCTTTCAAGTTGCAAAAAAATCATAAGGTTGTAAAGAAAAGCAATTTAGACCAAAACACTACAGCGTCACATATAGCTAGaatgtttatgttaatgttGATCGTCACAGAGCCGACAtcgtttctgtctttttttttaagctctatgcgtgtgtgtaatcagtgtatgtttgtgtatgaaTTATTGGATTCATGTCTACATACTTCAGCAGAGACGATACACATCTCCGGTTAtcataaatgagaaaaaataattatgaaaaacatatctgttcatttatatctatatataatttctgttttaattgcGTTTAACATGCAAAACAGTCACTTGGTGATCTGACAGCACTGAACCACACCTGAAAGAGACtcaagtgagtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgctttgTGATGATACGGTCTCATAGCAGCACGAACATCTCTCCTTTACTGAACGGTATCTCTACAGGGAAAGAACAGAGAGATGCGCTCCctcttaaaaacataaaatttaagCATGACGTCTGGATGTTAAGAAAACATTcccattatttacaaaatttgaATCAACAACTATGGAACGGTCATGAAGCTATATCTCATCACTGATTATATACAGTAGAAAAAACTCTGTACTGCCCACCATTGTGGTATTTTCAGTCTAATCTCCACTCAACTTCTATTTTTGCCCTAGAAAGCACCATATGCTGTAGTTAAACATGCCCATAATCATGGCTGCATAGTCCATGGTGGTTCAACTGCTGTGAGAGCATAAACACTggtgtgtcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU111682
AATGTAGAcaggcaaaacaaaaaccacagaTAAATCTCCAATACTTATGAAAGAAAActttatttgtgatttataaacaaaacacattaccAGATTtcataaagtaatataaaataataaacaccaTTACACTGATGAGCAGGTGTACAAAAATTTTGTCCAACAGATTCGCACTGTCAAAGTCAAAAGCATAGTGCCACTTAGGCACTGGATGAATTGATATATAATTACTACACACAAGCAGAATACATATAcctttttatttcctgttttatcttttttttatttttattttttttttatttttttttttt

Function

GO:

id name namespace
GO:0007399 nervous system development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111681 True 1274 lncRNA 0.35 4 7107758 7231920
TU111682 False 314 lncRNA 0.26 2 7176946 7196445

Neighbor

gene id symbol gene type direction distance location
fgf18b fgf18b,LOC107552074,LOC107742373,LOC107687415,LOC108437818 coding downstream 5678 7094645 ~ 7102080 (-)
LOC122353004 LOC107552052,LOC107677992 coding downstream 47997 7057711 ~ 7059761 (-)
avd LOC107552052,LOC107677992 coding downstream 130378 6975201 ~ 6977380 (-)
pcdh1a LOC107564544,LOC107678039,LOC107708655,LOC107720713,LOC107586135,LOC108437809 coding downstream 301347 6734920 ~ 6806411 (-)
kcnip3b kcnip3,kcnip3b,LOC107572711,LOC107678047,LOC107720714,LOC107687448,LOC108233759,LOC101482209,LOC108264878,LOC106535652 coding downstream 444920 6640993 ~ 6662838 (-)
LOC122352679 LOC107720699,LOC107552063,LOC107742368,LOC107687282,LOC107586145,LOC107678013 coding upstream 158250 7390170 ~ 7414303 (-)
LOC122352681 NA coding upstream 183473 7415393 ~ 7425751 (-)
parp14rs4 LOC107720697,LOC107552062,LOC107678011,LOC107552063,LOC107678013,LOC107677959,LOC107742382 coding upstream 195916 7427836 ~ 7441824 (-)
tlx3b tlx3b,LOC107742409,LOC107586149,LOC107676002,LOC105024610,LOC107552047 coding upstream 258641 7490561 ~ 7496338 (-)
ugt5g2 ugt5g2,LOC107678052,LOC107552046,LOC107742408 coding upstream 279804 7511724 ~ 7514061 (-)
G75429 NA non-coding downstream 25300 7029993 ~ 7082458 (-)
G75433 NA non-coding downstream 28393 7078555 ~ 7079365 (-)
G75366 NA non-coding downstream 459088 6645924 ~ 6648670 (-)
G75294 NA non-coding downstream 725317 6380936 ~ 6382441 (-)
G75297 NA non-coding downstream 754874 6352535 ~ 6352884 (-)
G75475 pcdh1gb2,pcdh1g11,LOC107720703,LOC107677965,LOC107586192,LOC107742390 non-coding upstream 1453 7233373 ~ 7270706 (-)
G75477 pcdh1g9,LOC107720701,LOC107688268,LOC107552005,LOC108276785 non-coding upstream 14633 7246553 ~ 7259394 (-)
G75478 pcdh1g9,pcdh1gb2,LOC108191536 non-coding upstream 16519 7248439 ~ 7255949 (-)
G75487 pcdh1gb9,LOC107552066 non-coding upstream 46832 7278752 ~ 7285469 (-)
G75488 LOC107586138,LOC107677986,LOC107687322 non-coding upstream 54096 7286016 ~ 7292112 (-)
sprn2 LOC107578968,LOC107720715 other downstream 476570 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 566785 6538122 ~ 6540973 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other downstream 2079245 5019307 ~ 5028513 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 3195016 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 3499970 3601612 ~ 3607788 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 292274 7524194 ~ 7528558 (-)
G75562 LOC107675999,LOC107720693,LOC107677996,LOC107552059 other upstream 298941 7530861 ~ 7544090 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 619101 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 628302 7860222 ~ 7860303 (-)
trnal-uag_2 NA other upstream 630365 7862285 ~ 7862366 (-)

Expression


Co-expression Network