G75937


Basic Information

Item Value
gene id G75937
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 8733779 ~ 8734996 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU112407
cagcatctcaatgggattcaaatctggactttgacttggccattccaggactctccatttcttctttttcagccaatctttggttgatttactagtatgttttgggtcattgtcatgttgcatGGTCCAGTTccgcttcagctttaattttctaaCTGATGGTCTCACATGTTCTTCAAGCACCTTCTGATACACAGTAGAATTCATGGGGGATTCTATGATGGTGAGCTGACCAGGTCCtgctgcagcaaagcagccccaaaccatgacacttccacctccatgcttcacagttggtatgaggttcttttcttggaatgctgtgtttggtttacgccaaacatgtcctctgctcttgtgtccaaataattcaattttggactcatctgtccaaagaacattattccagaagtcctggtctttgtcaactttatctctggcaaatgtcagtctggccttgatgtttctgttggaaagCAAAGGTTTCCTCCTTGCACACCTCCCATGCAAGTTAAACTTGTACAGTCTCTTTCTGATTGTAGAGGCATGTACTTCTACATCAACAGTAACCAGAGCCTGCTGTAGTTCTCGAGATGACACTTTAGGGTTTTTGGAGACCTCTTTTAGCATCTTGCGGTCTGCTCTTGGGGTGAACTTGCTGGGGCGACCAGTCCTGGGCATGttggcagttgttttgaaagcccTCCACTTGTAGACTATCTTCCGGACAGTGGAATGgctgatttcaaaatctttgactttttaaatcCCTTCCCAGACTCATAGGCTGCTACAATCTTTTTTCTGAAGTCCTCTGACAGCTCTTTTGCTCTCACCATGGTGCTCACTCTCACTTCAACAGTCAGGAGCACACCAAACTAAATGTCTGAGGTTTAAATAGGCCAAGCCTCATTCAACATGCAGAGTAACGATCTACTAATTATGTGCACCTGGTGTGATGTACCTGTGTGAGATCTGAGCCAATTTAAGAGGGAATACATGTGAGGGTGTCctatctttttcctcagttagaataggcatttttgtagaatgacatgtacagaagatcttgaaaagacttttcttcagttttcattgtttagtttgattactttaatctctctgtattgttgaaactgagatgaaataaccatttattaaaaatgttacaataaaaccacatgctttcaaagggtgtcctaattttttcacatgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112407 True 1218 TUCP 0.42 1 8733779 8734996

Neighbor

gene id symbol gene type direction distance location
sftpba LOC107744174,LOC107688118,LOC107562578,LOC107713296,LOC107578508 coding upstream 251791 8475593 ~ 8481988 (+)
ggcx ggcx,LOC107744113,LOC107686456,LOC107569403,LOC107562573,LOC107713363,LOC107688460 coding upstream 306849 8420336 ~ 8426930 (+)
fam136a fam136a,LOC107744116,LOC107713366,LOC107562571,LOC107569401,LOC107686460,LOC107688083 coding upstream 322176 8409867 ~ 8411603 (+)
stoml2 stoml2,LOC107686459,LOC107569390,LOC107688641 coding upstream 332183 8398186 ~ 8401596 (+)
fam166b LOC107744158,LOC107562540,LOC107686494,LOC107713372,LOC107555534,LOC107688046 coding upstream 438944 8292462 ~ 8294835 (+)
LOC122352417 NA coding downstream 335844 9070840 ~ 9085659 (+)
paxbp1 paxbp1,zgc:158234,LOC107684999,LOC107701114,LOC107718769,LOC107592156 coding downstream 555855 9290851 ~ 9302634 (+)
slc7a1a slc7a1,LOC107592154,LOC107718716,LOC107685000,LOC107720662,LOC107556867,LOC107701112 coding downstream 568640 9303636 ~ 9323880 (+)
mtus2a mtus2a,LOC107718718,LOC107685001,LOC107701115,LOC107555194 coding downstream 590828 9325824 ~ 9389728 (+)
vps36 vps36,LOC107720661,LOC107701118,LOC107718721,LOC107685004 coding downstream 672926 9407922 ~ 9416339 (+)
G75934 LOC107556871,LOC107701109,LOC107720665 non-coding upstream 21581 8708754 ~ 8712198 (+)
LOC122352915 NA non-coding upstream 28919 8703514 ~ 8704860 (+)
G75813 NA non-coding upstream 266502 8464744 ~ 8467277 (+)
G75814 LOC107569391,LOC107713297,LOC107744111,LOC107686454,LOC107562576 non-coding upstream 271372 8397832 ~ 8462407 (+)
G75799 NA non-coding upstream 419657 8313561 ~ 8314122 (+)
G75974 NA non-coding downstream 511002 9245998 ~ 9253481 (+)
G75984 NA non-coding downstream 531819 9266815 ~ 9273289 (+)
LOC122353086 NA non-coding downstream 542437 9277433 ~ 9283648 (+)
G76150 NA non-coding downstream 977831 9712827 ~ 9713108 (+)
G76162 LOC107693916,LOC107701134,LOC107701133 non-coding downstream 1028010 9763006 ~ 9766783 (+)
G75935 LOC107556871,LOC107718714,LOC107720665,LOC107592158 other upstream 17502 8713203 ~ 8716277 (+)
LOC122352912 fam136a,LOC107569401,LOC107562571,LOC107713366,LOC107744116,LOC107686460,LOC107688083 other upstream 152651 8580009 ~ 8581128 (+)
G75750 NA other upstream 630855 8101476 ~ 8102924 (+)
arrb2a arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026 other upstream 853679 7872539 ~ 7880100 (+)
trnat-agu_2 NA other upstream 871746 7861960 ~ 7862033 (+)
gbe1a gbe1,LOC107685012,LOC107708609,LOC106581537,LOC108410718,LOC105900410 other downstream 341870 9076866 ~ 9207335 (+)
LOC122353220 slc46a3,LOC107701100,LOC107555149,LOC107718789 other downstream 614176 9349172 ~ 9396047 (+)
map3k7cl map3k7cl,LOC107693871,LOC107701103,LOC107555143,LOC107557207 other downstream 957103 9692099 ~ 9699817 (+)
ufm1 ufm1,LOC107701138 other downstream 1191325 9926321 ~ 9933221 (+)
frem2a frem2a,frem2,LOC107720635,LOC107701139,LOC107555183,LOC107557211,LOC107693873,LOC107718779 other downstream 1208738 9943734 ~ 9992676 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G272551 NA unknown NC_047611.1 CM018557.1 20079415 ~ 20080911 (-)
mexican tetra (Astyanax mexicanus) G322411 NA unknown NW_019172891.1 APWO02000085.1 522964 ~ 523407 (-)