G76213 (LOC107557212,LOC107693892,LOC107718792)


Basic Information

Item Value
gene id G76213
gene name LOC107557212,LOC107693892,LOC107718792
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9660691 ~ 9663782 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU112779
CTTACCTTCGCAGACGTCTCAAACCAGCCCACAAATCCGTTCTCCTTGCAGTACTGGTCCATCTTCAGGCTGTTGTTAGTCAGAAAGTCTCTATTTTGGTCGCACTTATTGGCCAGGAGCACTGTGGTGATACTCTGGCCATTTGAAAGTATTAATTTTGAGTCCAGATCCTCCTTCCATTTGGAGACAGCCTCAAACGTGGTGGGTCTGGaaacatcaaaaacaatgaACGCCCCCATGGCCTCCCGGTAATAAACCCGCGTCATGTTCCCGAACCGTTCCTGACCTTACTGCGATGTCCCACAGCTGCAGCCGGACCGTCTCTGAGTCCCAGTTAAGAACTTTAAGCGCAAAATCCACCCCGATGGTCGCTCTGTAGTTAGTGGAGTACGTCTGATGCACATACCGTTTGATGATGCTGGTCTTCCCTACTCCCAAATCACCGATGACAAGGATCTTGTACAAGTGCTCTTTCCGATTGTTATGCATCGCTGAGGACATTTGTGTGTCCAGTGTTTATCGCACTAACTAGTCGCCTGTCATTGACCTGAACTGGCGCCGCCCAGGGCGTGGAAAAACTTGTGACCAGCTGTCAGACAAACTTTGTTTGCT

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112779 True 612 lncRNA 0.50 2 9660691 9663782

Neighbor

gene id symbol gene type direction distance location
kpna7 kpna7,LOC107693907,LOC107720648,LOC107556882,LOC108423764,LOC103041448,LOC108277302 coding downstream 28345 9629432 ~ 9632346 (-)
mtnr1bb mtnr1bb,LOC107720651,LOC107693905,LOC103030874,LOC108423763,LOC105890457,LOC108276622,LOC107556861 coding downstream 100453 9542381 ~ 9560238 (-)
LOC122352476 LOC107693870 coding downstream 183346 9471542 ~ 9477345 (-)
LOC122352477 LOC107693870 coding downstream 190723 9464340 ~ 9469968 (-)
LOC122353226 LOC107720654,LOC107556876,LOC107685010,LOC107555192,LOC107718727 coding downstream 198084 9457441 ~ 9462607 (-)
tmem135 tmem135,LOC107701128,LOC107718730,LOC107720646,LOC107693910 coding upstream 13488 9677270 ~ 9684649 (-)
cct8 cct8,LOC107693911,LOC107701129 coding upstream 21654 9685436 ~ 9690789 (-)
grik1a grik1a,grik1,LOC107693913,LOC107718733,LOC107701130,LOC107555187,LOC107557219 coding upstream 54045 9717827 ~ 9761715 (-)
tiam1a tiam1a,LOC107693916,LOC107718732,LOC107720640,LOC107557220,LOC107701134,LOC107701133 coding upstream 100544 9764326 ~ 9820581 (-)
sod1 sod1,LOC107555186,LOC107557221,LOC107701135 coding upstream 163308 9827090 ~ 9829492 (-)
G76112 NA non-coding downstream 88408 9570431 ~ 9572283 (-)
G76042 NA non-coding downstream 335213 9322599 ~ 9325478 (-)
LOC122352752 NA non-coding downstream 350463 9307968 ~ 9310228 (-)
G75970 NA non-coding downstream 530371 9129886 ~ 9130320 (-)
LOC122352914 NA non-coding downstream 773333 8887004 ~ 8887358 (-)
LOC122352922 NA non-coding upstream 32056 9695838 ~ 9697388 (-)
G76225 LOC107693912,LOC107720644,LOC107557217,LOC107555188,LOC107718731,LOC107701131 non-coding upstream 38210 9701992 ~ 9710708 (-)
G76229 NA non-coding upstream 53251 9717033 ~ 9717413 (-)
LOC122352923 NA non-coding upstream 98027 9761809 ~ 9763491 (-)
G76233 NA non-coding upstream 159253 9823035 ~ 9824169 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 35286 9572372 ~ 9625405 (-)
cd209 NA other downstream 150261 9489330 ~ 9510430 (-)
G76068 NA other downstream 230891 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 1104603 8543097 ~ 8556088 (-)
smtna smtna,LOC107686451,LOC107569392,LOC107688657,LOC107713360,LOC107744109,LOC107579337 other downstream 1133244 8519666 ~ 8527447 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other upstream 603572 10267354 ~ 10283665 (-)
G76438 NA other upstream 716314 10380096 ~ 10383309 (-)
G76498 NA other upstream 814277 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 1309099 10972881 ~ 10983738 (-)
G76625 NA other upstream 1353328 11017110 ~ 11038731 (-)

Expression


Co-expression Network