G76438


Basic Information

Item Value
gene id G76438
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10380096 ~ 10383309 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU113101
tggggtcattgtgACAATGCTTCTCACACGGAGTCCAATATCGTGTATACCGATGGAGTTAGTGGACAGTTTACTACATGGACGCGTATAACGTTGCCAACGTCTTTGGAAATTTAACAAGGTCACTTGTTTTAAATACCAGAGACCAGCACAAAAGAGTTTGGATATTGGACTCAACCTGAACATGTCAAACCCACCGCCGGTACCGGAGAAGTCGAGTCCGGTCACACCGCAGGCGACAAAGAAAGCCCTGCTCGGGGACTGCTGGAGCTGTCGGATCCTCTCCGGCCTTGGGCTGCTGGCTTCTGCGGCATATGTGGGCATGCACGGGCGGAGGGCCATGAGTCCAGGCGGACCCCCGTCTTTGGGCATAGCGGTTCAGTTTACGTTTGCAGCAGGTTTGGCTGCCTGGGGCATAGTGGTGATCACTGATCCAGTGGGGAGGTGCACAAAAGTAGCATAGCTTGCATTTGGACTTTTGAGTGAATAACCAGAGCCACACTGGCAGAGttatgaaattcaaataatgatGAGAATGTgatatttcaataaatgtttttatttgcaacttATAAGGCCTCTTTCTTTccagGTGATTTAGTAATTATCTCATTATAGTTTTAATCATATTAATCaatcaacattttaatcattatagCGCATGAagtgcttaaaatatttttttatgaattattgttaattacctgatattgtttataaattatttaggAATGCAAAAACACTCATTTTGAAGAGCAAATTACGAGTTGGCATTTGGTCCTTTCTTTTTGCCAAATGTTGGGACAACGTTGACAAAGCGTCGGTTATACTGAATTCTTCTCTTTGCCCTGCcggtctttttcttttttttctcctgcttGTCTACCT
>TU113102
gtcattgtgACGCCAATGCTTCTCAAAGTGTCCGAAATCGTGCATAGCGATGGAGTTGGTGGACAATTTACTGCATGGACGCATATAACGTCGCCAACTTCTTTGGAAATGTAACAGGGTCGTTTGTTTTAAAGACCAGAGACCAGCACAAAAGAGTTTGGATATTGGGCTCGTCAACCTGAACATGTCAAACCCACCGCCGGTACCGGAGAAGTCGAGTCCGCAGGCCACTATTCTGCTCGGGGACTGCTGGAGCTGTCGGATGCTGTTGGGCAGTGGGCTGTTGACTTATGGGGGATATGTGGGCATGCAGGCGCGGAGGGCCATGAGTCCAGGCGGACCCCCGTCTTTGGGCATAGCGGTTCAGTTTATGTTTGCTGCAGGTTTGGCTGCCTGGGGCGTAGTGGTGATGGTTAAACCAGCGGAGAAGTACACAAGAGTAGCATAGATTGCATTTGGACTTTTGAGTGAATAACCAGAGCCACACTGGCAGAGttatgaaattcaaataatgatGAGAATGTGCTTCAGTgatatttcaataaatgtttttatttgcaacttTTAAGGCCTCTTTCTTTCCAGGTGATTTAGTAATTATCTCATTATAGTTTTAATCATATTAATCaatcaacattttaatcattatagCGCATGAagtgcttaaaatatttttttatgaattattgttaattacctgatattgtttataaattatttaggAATGCAAAAACACTCATTTTGAAGAGCAAATTACGAGTTGGCATTTGGTCCTTTCTTTTTGCCAAATGTTGGGACAACGTTGACAAAGCGTCGGTTATACTGAATTCTTCTCTTTGCCCTGCcggtctttttcttttttttctcctgcttGTCTACCT
>TU113103
tggggtcattgtgACAATGCTTCTCACACGGAGTCCAATATCGTGTATACCGATGGAGTTAGTGGACAGTTTACTACATGGACGCGTATAACGTTGCCAACGTCTTTGGAAATTTAACAAGGTCACTTGTTTTAAATACCAGAGACCAGCACAAAAGAGTTTGGATATTGGACTCAACCTGAACATGTCAAACCCACCGCCGGTACCGGAGAAGTCGAGTCCGGTCACACCGCAGGCGACAAAGAAAGCCCTGCTCGGGGACTGCTGGAGCTGTCGGATCCTCTCCGGCCTTGGGCTGCTGGCTTCTGCGGCATATGTGGGCATGCACGGGCGGAGGGCCATGAGTCCAGGCGGACCCCCGTCTTTGGGCATAGCGGTTCAGTTTACGTTTGCAGCAGGTTTGGCTGCCTGGGGCATAGTGGTGATCACTGATCCAGTGGGGAGGTGCACAAAAGTAGCATAGCTTGCATTTGGACTTTTGAGTGAATAACCAGAGCCACAaataatgatGAGAATGTgatatttcaataaatgtttttatttgcaacttATAAGGCCTCTTTCTTTccagGTGATTTAGTAATTATCTCATTATAGTTTTAATCATATTAATCaatcaacattttaatcattatagCGCATGAagtgcttaaaatatttttttatgaattattgttaattacctgatattgtttataaattatttaggAATGCAAAAACACTCATTTTGAAGAGCAAATTACGAGTTGGCATTTGGTCCTTTCTTTTTGCCAAATGTTGGGACAACGTTGACAAAGCGTCGGTTATACTGAATTCTTCTCTTTGCCCTGCcggtctttttcttttttttctcctgcttGTCTACCT

Function

GO:

id name namespace
GO:0061919 process utilizing autophagic mechanism biological_process
GO:0006914 autophagy biological_process

KEGG:

id description
ko04136 Autophagy - other

RNA

RNA id representative length rna type GC content exon number start site end site
TU113101 True 888 TUCP 0.43 3 10380096 10383309
TU113102 False 881 TUCP 0.42 2 10380096 10381047
TU113103 False 867 TUCP 0.43 4 10380096 10383309

Neighbor

gene id symbol gene type direction distance location
mrpl49 mrpl49,LOC107720585,LOC107693898,LOC107701163,LOC107718758 coding downstream 1078 10377864 ~ 10379018 (-)
znhit2 LOC107720610,LOC107548862,LOC107693940,LOC107718755,LOC107701159,LOC107555156 coding downstream 2368 10375502 ~ 10377728 (-)
LOC122352632 LOC107720618,LOC107718749,LOC559907 coding downstream 77070 10289532 ~ 10303026 (-)
LOC122353016 slc46a3,LOC107693895,LOC107720589,LOC107701147,LOC107718743 coding downstream 188866 10184794 ~ 10191230 (-)
dchs1b LOC107718741,LOC107701146,LOC107555179,LOC108438972,LOC108277286,LOC105907404,LOC107693876,LOC107720538 coding downstream 221203 10066471 ~ 10158893 (-)
LOC122352948 LOC107693944,LOC107548866,LOC107720609 coding upstream 223 10383532 ~ 10384648 (-)
cnih2 cnih2,LOC100706298,LOC107718764,LOC107091387 coding upstream 6807 10390116 ~ 10398224 (-)
auts2a auts2,LOC107693947 coding upstream 98344 10481653 ~ 10762897 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886 coding upstream 490503 10873812 ~ 10891764 (-)
med13a med13,LOC107693951,LOC107744626,LOC107699258,LOC107747042,LOC107548827 coding upstream 509484 10892793 ~ 10945715 (-)
G76426 NA non-coding downstream 62696 10317071 ~ 10317400 (-)
G76421 NA non-coding downstream 126235 10253025 ~ 10253861 (-)
G76413 NA non-coding downstream 137914 10241959 ~ 10242182 (-)
G76388 NA non-coding downstream 195574 10184094 ~ 10184522 (-)
G76327 NA non-coding downstream 273917 10098265 ~ 10106179 (-)
G76458 NA non-coding upstream 20648 10403957 ~ 10411838 (-)
G76488 NA non-coding upstream 41306 10424615 ~ 10445156 (-)
G76489 NA non-coding upstream 52883 10436192 ~ 10460399 (-)
G76493 NA non-coding upstream 72282 10455591 ~ 10456512 (-)
G76618 NA non-coding upstream 488497 10871806 ~ 10872087 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 96431 10267354 ~ 10283665 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 754691 9572372 ~ 9625405 (-)
cd209 NA other downstream 869666 9489330 ~ 9510430 (-)
G76068 NA other downstream 950296 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 1824008 8543097 ~ 8556088 (-)
G76498 NA other upstream 94750 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 589572 10972881 ~ 10983738 (-)
G76625 NA other upstream 633801 11017110 ~ 11038731 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 793260 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 1122001 11505310 ~ 11584960 (-)

Expression


Co-expression Network