XLOC_006596 (si:dkey-103j14.5)


Basic Information

Item Value
gene id XLOC_006596
gene name si:dkey-103j14.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 23233956 ~ 23270576 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012740
CCTGGCTCATAAATTTAACATGGTTAACAGTTAATCTTAAGTATTAATGTGCTGGTGTTTAAACATTGTGCAATCCTAAGCACATGGTTAATATGTCATGTTAAACGTCAGTGTTTGCAGTTCAAGTGTCACTGTCTGAATGAAGAAACACTCTATACACTGTTGGCTGACTATTAAGGGCTGACGGAGGACAGAGGATGAAGACTGTGATTGTGGTTCATGGTGGCGCGTGGAGCATCCCGGACGCATTAGCAGAATCGTCTGTGGCAGGAGTCAAGGCGGCAGCGCGGGCAGGGGATGCTGTTCTTAGGACTGGCAGAAGTGCTATTGACGCTGTAGAAACAGCTGTGAGGTGTTTAGAAGATGACCCTACATTTGATGCAGGTCATGGTTCAGTTCTGAATATTTCTGGTGAGGTGGAGCTGGACAGTATCATTATGGATGGAGAAACACTTGCTGCTGGAGCGGTGGCCTCTGTTAGAAACATCGCCAACCCAGTTAGTCTCGCTCGCGCTGTGATGGAAAAGacagATCATGTCATGTTGACAGATAGAGGGGCAAGCATGTTTGCGGAGCACATTGGTACTCCAGTAGCTCATGATTTGGTGACTGAGCTGGAGCGGAAAGAGTGGGAACATAGCAAAAGCTATCCTGATGGAGTCAAAAAGTTTTTTAACACACAATGGGGTCATGATACTGTTGGAGCGGTGGCTCTGGACTCTTCGGGTAATGTGGCGTGCGCTACATCCACCGGAGGAATTCGAAACAAAATGGTGGGAAGAGTTGGTGATTCTCCTATTATAGGATCTGGTGGATATGCAGACAATAGAAGCGGCGCAGTCTCCTGTACCGGCCATGGAGAGTCTATTCTCAAAGTCACCTTAGCCAGATTAATCCTCTTTCACGTTGAGCAAGGGAAATCAGCCGTAGGCGCCGCTGAAGCCTCGCTGCAGTACATGAGCCAGAGGGTGAAGGGATGTGGAGGAGCTGTCCTTCTGTCCTCCACGGGCGACTGGACCGCCAGCTTCACCACTCCACGCATGGCCTGGGCCTCCGTTAAAGAGGACATCCTGCACTATGGGTTAAATCCAAAGGAACACTTTACAGAGATGCTCAAGTAAAAATTGGTGTTTTAGTAAATACAATTGAGGTAAATTGCTTAGGAATTCTGATGTTTGCTTAAGTTTGATTTTAGCAGTTTGTCCCCTGTGAGGTATATTATTACacactttttattttcaatttaaatcaGTACTatatgaactgtttttttttaacaagcagTTAACGCAAAAATGTTCTTAAGCAGTAAAATCAAAtcgttttacatttgattaacatttagagcaggggtcaggaaccttttttcagcaaagagccttttatgattttttttagcaaatgaaTTTAAAGagccactggccactttattaggtacacctctccaactccttaacacaaatttgtaatcagcctaTCACATGGCCGCATCTCAATGCATTGAGGCATGTAGACATTGTCAAGATGATTGATTAAATAATACAGGTGTaaacaaaaactttatttatgtccatgcacaactcaaaaataaacaaatataaagcaTCACATGTAGAGCAAGTCCATGAATGGAAAAAAAGGACAATTTATAGAATGTTTTTCTTTTCGCCATCACCACTCATGGATGTTGTTTGAAATTACATACATGAGAAGATTGCCATAAAAATGCAAGTTGTTTGCTCTTTATTGGTGTCGCAATTCTTTATCCATAGTGCCGCACACGCGGATTGGTTGAAACGTCCTTTTATTGCTAACtgagttcttattcattttgctctaaaaattacaattaaaaaggGATTTATAATTGAATTTTCAATCGAAAACTGACTTCTAGTCATGGTTatcatttttaaaactgttataaaTTGTTATTGAAGGGAGACAGCTGGAGAGTAACGCATACAGTCTTTGGTCAAAGAGCCAGATGTGGCTCgcgagccataggttccctacctCTGATTTAGAGAATAATCCATTCTGCACTATACAAaatgcttggttccaca
>TCONS_00012741
ATGAAGACTGTGATTGTGGTTCATGGTGGCGCGTGGAGCATCCCGGACGCATTAGCAGAATCGTCTGTGGCAGGAGTCAAGGCGGCAGCGCGGGCAGGGGATGCTGTTCTTAGGACTGGCAGAAGTGCTATTGACGCTGTAGAAACAGCTGTGAGGTGTTTAGAAGATGACCCTACATTTGATGCAGGTCATGGTTCAGTTCTGAATATTTCTGGTGAGGTGGAGCTGGACAGTATCATTATGGATGGAGAAACACTTGCTGCTGGAGCGGTGGCCTCTGTTAGAAACATCGCCAACCCAGTTAGTCTCGCTCGCGCTGTGATGGAAAAGacagATCATGTCATGTTGACAGATAGAGGGGCAAGCATGTTTGCGGAGCACATTGGTACTCCAGTAGCTCATGATTTGGTGACTGAGCTGGAGCGGAAAGAGTGGGAACATAGCAAAAGCTATCCTGATGGAGTCAAAAAGTTTTTTAACACACAATGGGGTCATGATACTGTTGGAGCGGTGGCTCTGGACTCTTCGGGTAATGTGGCGTGCGCTACATCCACCGGAGGAATTCGAAACAAAATGGTGGGAAGAGTTGGTGATTCTCCTATTATAGGATCTGGTGGATATGCAGACAATAGAAGCGGCGCAGTCTCCTGTACCGGCCATGGAGAGTCTATTCTCAAAGTCACCTTAGCCAGATTAATCCTCTTTCACGTTGAGCAAGGGAAATCAGCCGTAGGCGCCGCTGAAGCCTCGCTGCAGTACATGAGCCAGAGGGTGAAGGGATGTGGAGGAGCTGTCCTTCTGTCCTCCACGGGCGACTGGACCGCCAGCTTCACCACTCCACGCATGGCCTGGGCCTCCGTTAAAGAGGACATCCTGCACTATGGGTTAAATCCAAAGGAACACTTTACAGAGATGCTCAAGTAA

Function

symbol description
si:dkey-103j14.5 Predicted to enable asparaginase activity and beta-aspartyl-peptidase activity. Predicted to be involved in asparagine catabolic process via L-aspartate. Predicted to be active in cytoplasm. Orthologous to human ASRGL1 (asparaginase and isoaspartyl peptidase 1).

GO:

id name namespace
GO:0033345 asparagine catabolic process via L-aspartate biological_process
GO:0005737 cytoplasm cellular_component
GO:0008798 beta-aspartyl-peptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0004067 asparaginase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-170 Predicted to enable asparaginase activity and beta-aspartyl-peptidase activity. Predicted to be involved in asparagine catabolic process via L-aspartate. Predicted to be active in cytoplasm. Orthologous to human ASRGL1 (asparaginase and isoaspartyl peptidase 1).

Ensembl:

ensembl_id ENSDARG00000002219

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012740 False 2069 mRNA 0.42 7 23233956 23270576
TCONS_00012741 True 924 mRNA 0.51 6 23234904 23264724

Neighbor

gene id symbol gene type direction distance location
XLOC_006595 NA coding downstream 16138 23212759 ~ 23217818 (-)
XLOC_006594 kifbp coding downstream 138950 23083858 ~ 23095006 (-)
XLOC_006593 srgn coding downstream 159502 23070581 ~ 23074454 (-)
XLOC_006592 vps26a coding downstream 166575 23058268 ~ 23067381 (-)
XLOC_006591 supv3l1 coding downstream 182190 23037585 ~ 23051766 (-)
XLOC_006597 NA coding upstream 137453 23408029 ~ 23411631 (-)
XLOC_006598 prim2 coding upstream 217706 23488282 ~ 23612369 (-)
XLOC_006599 map3k21 coding upstream 364241 23634817 ~ 23666579 (-)
XLOC_006600 rgs17 coding upstream 457600 23728176 ~ 23756700 (-)
XLOC_006601 phactr2 coding upstream 648904 23919480 ~ 23956361 (-)
XLOC_006471 BX537274.2 misc downstream 12969051 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 22407731 825904 ~ 826225 (-)
XLOC_006585 BX530068.1 non-coding downstream 386472 22843830 ~ 22847484 (-)
XLOC_006582 CR550304.1 non-coding downstream 449523 22778060 ~ 22784433 (-)
XLOC_006578 BX649385.1 non-coding downstream 1038788 22191361 ~ 22195168 (-)
XLOC_006577 NA non-coding downstream 1293991 21925701 ~ 21939965 (-)
XLOC_006602 AL772289.1 non-coding upstream 690716 23961292 ~ 23961406 (-)
XLOC_006605 CR762497.2 non-coding upstream 856487 24127063 ~ 24127179 (-)
XLOC_006607 CR762497.1 non-coding upstream 1013094 24283670 ~ 24286390 (-)
XLOC_006611 NA non-coding upstream 1076413 24346989 ~ 24351543 (-)

Expression


Co-expression Network