G77135 (ppm1e,LOC107728886,LOC107686131,LOC107588822,LOC107734442,LOC107691656,LOC107577402)


Basic Information

Item Value
gene id G77135
gene name ppm1e,LOC107728886,LOC107686131,LOC107588822,LOC107734442,LOC107691656,LOC107577402
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 12796664 ~ 12880735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU114128
ataataaatgtgtttacaggTGAAATGGCTGGAAACCGAAAATTTGTAATTGAAGAAATTCTTCAGTCCAAATATTTGGATTCTATAAATTAGCTTAAAAATTGAATATAATGGCACGGACAAGTTGTTAAGAGATTTGGTCACACCGGTCTCATTTACACTCCCTTGTGTCTTTCCAAAACGATGACTTTTTTCCCTTCGGATAACGaaagaaattcatttaaaaaatatctctgTTTTGTCCATACAACGGAAGTgataccaacattcttcaaaatatcttcttaagggtgagtaaaagatTTTTGCGTGAACGACCCCCGAACCCAAAATATTCCTTGAAGCTTGTTGTCCCTTTTAGGCACAGAACCTCAAAAACGAGTTACTTCTATACATGATGTAATTGACTGAGAAAGATAATACTTAAAAGTGAGTCCCTCGCTGTACTCTGGCAACAAATTCTCTCCTAACCTTAAGTGTTgtatcccaaaaaaaaaaaaaaaaaagtggtggAGCGATCGGATTTACTCTACATCCACTTTCCAGCCTGTCAAAAACAGGCCCATGTTGAAGATAATAAAGGCACACATTGTGCTGCTGAAACTCAACTATCCATGTCCTCAACACCTGAGGGCCACTTCAACATATGAGCGTCTCCTGTCAGCCTCAAGCAAACCTCTCTGGCTACATTTACACATCCCGTACAAACTTCAATCTGACAATCGAATCATAATCCAGCTTGCCAATATAAAGATAACTGATGAGACGTTTGGCCCAACGTATCTGCCTTGAATGGGAAGTGAATAATCTTTCTCTACAACAAGCTCTTGTAGATGAAGCGCTTGTTTAGGTAGCGTCTCCTGATGAATActcattttcttctttggttttgaaactgAAAGTGTATAGAATATATACTGCATCTAAATTTGATCTGATATGTTTCTCTCCAAGGCAATGATTGGAAAAGCAACAGGTGTTTTCTGTCAGTGGGTTATTTGTAGTTAGCATCATCAAAGGGTGGCTGGAAATGTGGTGAATGTGCAAATGCTTCGACGTGGCAGCCGCCCAAAACCAGCCCGGCACTTTCCACAAATAGAATACAAAATAGAGCCTCTTAAAAATCAAGTCGTTTTTTTCGTTCCTTCAACAAATTGTCAGTAAACGTAGCGCTTATACTTCAGAAAATGATGACCGCCAGCCTAACAAGGTCAAACTAAACtggtttattttactttgagtTTAACATGAGGTTTGCGATTTTTGCAACCCACTGATCCAAGTTAAatcgttttattttatagcaattaataataaacaagttaagttttttaaaatgaaactcacaatattattcaaatgaaaagttaaaaaaccCCACTAAGTTGCATCCTGTTTGTGAAAAGCGGCATCGGTGGTTTTAGATAAATGGACACGCGTAGCAAAACGAACAAGGTAACACATGGGATCATAAACAGCGCATACAGCATGTGTGTTAAAAACAAAGACACGCATGAATATGATGCCACTCGTTTCATGATGACTCATCACAGCTAGGTCGTAATTATGTCCGAGCTGCAATTTATAGACAAATCTTAAGCTGTAATTTATAGACATCATTACATCCTCAAGTATCCAGTTCATACAATAAGTATACGCTTcagataaaaaggaaaaataactaattttagAGGTCTATGATGTCAGGACCTTCAGTTTGGCTTCAGTAACCAAAAGCTGTATCGCGTCTCTCACATCAAACACCAGATATAAGATCTGTTGACTCTTGACTGCTTGATTTTATGCTGGGTTTGTCTAAAACTTCACttctctgtgcgtgtgtgtgaacgGAAGATGGTGTTAAcgctcttttttcccccccttccacacacacacacacacacacacacagaagcgcACAAAGAGAGGGTTatgaggatgaggaagaagCTGGCTGAGAGTGGTGAGGGATTCTGATAGGCTGGCTCATATAAGGTGAGAGTGGAAGCGTTAAAGCAATGTAGGATCTCTTATGTTAGATTGTGTTTCTGTTCCAGAGCTCAGTGAGTTGCCTCGCTGCCTGCTCCCTACATAGACAGCCATCTGTGGAACCTCACAACAGACTCATTTGAACCCTTTTTGTAGGCAGCAACACAAATAATCAACACAAGGAATTTTATTAGCGTTTGCCGTCAGCATGCTGAGCTTATTTTCATCATGGAAcaacaaattttctttttttgttctgaatTTTGAGTTTACACCTCATGTTTTCTCAGGTTATATCTACACTagtgtgttttaaaacacaacTTTTGCTACGTTTGTGTCTGTCGTTTACACTACTCCAGCTTTTTCGACccttgaaaacagaaaaatgctgcagatactttatttttttatggctCCGGGGTTGCATTTCAATGTAAACGGACCAAAACGGGGagacttttgaaaatgatcaTGTGTTTGCCCCTATTCGCTCTACGTATCCTTGGCGACTGTAAACAGGAACATCATGCTCATTGTTGTACCTGCATAAATGGCCATGTGACGTGCGCTTTTGGTTGTGTGTTGTAAACGCGGTGAAACGCCGTTCTAAATTCACATcctgcatgcatttaaaatctttaatctCAGAATTGTGCATTTCCATTCTGCAGTTCTGACTTTCtgaaattctgagaaaaaagtgcAATGCACGTTTATAACgtgagaaaaaaatgtgtgggACATTAACTCACAACTGcgaacaaaaaaagtaacatttatatttttttattccacgGCAGAAATAAGCTTCCATGCTGATAAgcataactataaataatacacacaaatattggGCAAAACAGGTTTAAATTATagattttgatttatatttcgTTTGTGTTCTGCACAAAGGATAGATGTGATGCTGCCTTAAAATTTGTCCTATACAAGGTGACTAAAAGGTCCCTCAAAATGCTGCCTAAGAAGGctgctcactaggttttggaacagagtatgcaagtatgtgtgtgtacgccCACGTCATGTGTTGTGTGAAATGAGTGTGTTTTAGCTTTAGGGACGAAGGACGGCATGATGGGGCAAGGAAGTTGTCGATTAGACCTTTTTGCTGTGGGTTACATGGGGAAAGGCTATCCCAGGCTTCCTCTCTGGAGAGCGGAGAGGATAGGGCACGCTAGGAAAGCAGCTCAGAGGACCGTGACTTTCTCTAGCCCTCCGGATCAGGCGCTGCGATTCCCTCCTCAGCGGCATGACCTCCAGCCGCCTCTTCCTCCGGCCCTCCTGAGGGAAAAGCGCAGCCACCTCCAACAATTGTCCATCTGAGGTGGTCTGCGTGTAGGAGGGCACACTGGGTTTAGGCTGGGGCTTTTGCCTGTACCCAAAGGGGCCGTCCTCTTGGTAGGGGCGCCAGGCCGCGCCGACCCCACTGTAGGGGGGTATGAGGTCTGGCATGACGGTTCTCGTCGGGGGGAGGCTGGATGAAGCTGGGAGCCTGAAGCAGCCAGTCTCTGTACGCAGGTCGGGCCCCATGATGCTCAGACTTGTTCTGTCCGTAAATGAATCCATGCGGTCTTCGTAGGCCAGGTCGGCCGGTGCCGAGCACTGCTGGAGAGGCCAGCCACCCCGGTTCTTTCCTCCATTCTCCGCCCCTCCGTCTTGACACACCAGCTCACTCTGCAAGGACtccacttcctcttcttcctctcccGCGTCCTCCACCGGCTCCTCTTCTTGCTCCTCTTCCGGTTCATCTGAAGGTGGGGGCAAACGGGGGTCCCTGAGGAACACCACGATGACCGTGATATTGTCGCTGGACCCAGCGTCTCGGGCCGAGGCCACCAGCTTGTGGGCAACCATGGCGGTGTCCCCGTTGTTCTCCTGTAAGTGGTCGGTGACGACTCGCACAGCTTCTTCTGGATTCACTGTGTCGTAGAAGCCGTCGCAGGCCAGGATCAAGTAGTCTTCGCTGCCGTCCAGGTTGAAGGTGGTGTAGTCTGCGTCTCCACAGATATAGGGCTTGTGTTCTGAATCAC
>TU114135
TCATCAACACAGGTTTAATAGAATACAGTGACCATCAGTAACataggtttcttttttttctttttcttttttttaagatacgtttgttttttcccctctaagTCGTCTGGAAACCCTTCCTCAGCTTCGCTTTAAAGAAGAAGAGCCTTCTGAAGAGCTCTCTTCGCTCATGGCTTGCGTAGGTTCATTATTGCTAGCAGAAAAAAGAGCAGTACTGAACGGTACATGGACAAAAAGCAGTGACAGCAAGTGAGGAGGGCTAACCGTCGTGAAAGCTCGAGAGCGCGCCCTCGACGCGGGAACTATCGCTAACAGGGAAAACGCCGAGTCTAACAGTCAGTCCACGGGGGGGAGTTGGGTGGGGGCAAGGCTCAAGAGTATGTGAAGACGAAGTGAGATGTTCTTCATCGAAACGAACCGGTCCTTTGACTCATTAGCACTCGGCGAATAAGCGAGAGCCCGTGGCCGTGTTACAGACGCCCAGCGCTGCATCTGTTAGACTCTCGCGCGCTTCCGAGGAGTTTTCAAAAACGTACTTCGGCGAGAAGGGGGCGGGGCCAGGGGTTACTGAAAAGCGTTACAGACTTCTGTATCCATCTGAGTTATCGGCGGTGATTAAAATAGCACATTTAGAAGACGGACGTCACATACACATCCCAAATATTACGCGCACTCACGCACACGCTCAaaacacgcacacgcacacacacacacacacgtgtatacaATATATGCAAGTTACTACACTTCTGATATATAATCTGCGCCCCGTACGGGGTGCTAAGAGGAATGACGGCGAGGGAGTTTGTACGTGATGGTGAGGGTTAGCCGTGTAGATCATCTCGAGCGCGAGGTCCGTGTCCCGTGAGCTGCACGCGTCACTCTGTGGTCGTCAATCCCGTCTCGAAGGCCGTGGGGGAGCTTCTTCCGCTTCTAGTGCGGATCTAGGATTTACGAGGCAGGGCAGCCGGTGGCGTGCGTAGAAACTTCCACAAAGGGTAGAAAATCGTGGTGAATCTCATCATGGACAGCAGAGTGCGTACATACATTCGGGACAGTCCGGGCGTCTTTTAATGCGGGTAAAGGTTTCATTGATCCTGCTCCGCGTTTGAGGGGTTCCTTTTGCAGTACATTCGACATCTGGATGTACATTCTGGACCAGTTAAAATGCACAGATCAACTTCCCATTCACGCCCCTTGATTTTCTGACAGGAGAGCACCGGTGGCGTTAGGCTCAGGTTTTATGTGGGTGAACTTCACGGTTGGAGGCGGATGAAGGGAGCTTGAATGACAACACGAAAGTGATGGATGTTTGCGCCCGCCCCCGCCCATCCCTCCaccaacaaaaactaataaatgaatGGAAACCGGTCAGTGCAATGGCACGGCAGGGATGGCACAAGTCTTTCCGCTAGTCGTAGACGTAAGTGTGAAGGAGTTAGGGGGTTGCAGAAACACGCGTGTGGTTTGTGTGGAGCACCTGAGCCGCACAGGCTTCTTAAACAGAACCAGCCAATGTCATCACAGCtgtgatcatcatcatcaaaaaataACGCGCATATGACCAACGACTGTAGAAATACAAAGACTGCTCGCTCCTAGCCATAGTTTTAAGTCACGTGACCAGTTCGAAGCCCTGGAGGGCACAGCCTCAGTAGAACTGCAGCAAAAAGCCTCACATCTGTTTCACAAATATTTGGATCACCTCccaaaaccataaaacaaagGTATGTTGATAAAACCTACGTTCTGGCTATTTGCAATCTATGTTAAGTTCCCGCGGCAATATCTCAATCATTAAACAGCGCGACAAAAAACTTTGCAGAAACACTTAAAAGTGGcgcaatatatttaaattaaggGTGTGACGTCACGTGAAAACTATCAATACTTATGATTATTATGTTTGAGATGGGCCTAGCCTCGCCTGAAATAAAGGAGTGAATAATtgctgacagagagagagagagaaaaataataataataataaaaaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattcttattattatttttaaataataaatgtgtttacaggTGAAATGGCTGGAAACCGAAAATTTGTAATTGAAGAAATTCTTCAGTCCAAATATTTGGATTCTATAAATTAGCTTAAAAATTGAATATAATGGCACGGACAAGTTGTTAAGAGATTTGGTCACACCGGTCTCATTTACACTCCCTTGTGTCTTTCCAAAACGATGACTTTTTTCCCTTCGGATAACGaaagaaattcatttaaaaaatatctctgTTTTGTCCATACAACGGAAGTgataccaacattcttcaaaatatcttcttaagggtgagtaaaagatTTTTGCGTGAACGACCCCCGAACCCAAAATATTCCTTGAAGCTTGTTGTCCCTTTTAGGCACAGAACCTCAAAAACGAGTTACTTCTATACATGATGTAATTGACTGAGAAAGATAATACTTAAAAGTGAGTCCCTCGCTGTACTCTGGCAACAAATTCTCTCCTAACCTTAAGTGTTgtatcccaaaaaaaaaaaaaaaaaaaaaaaaaaattgt

Function

symbol description
ppm1e Predicted to enable kinase activity; metal ion binding activity; and protein serine/threonine phosphatase activity. Acts upstream of or within dephosphorylation. Located in nucleus. Is expressed in central nervous system. Orthologous to human PPM1E (protein phosphatase, Mg2+/Mn2+ dependent 1E).

NR:

description
PREDICTED: protein phosphatase 1E-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114128 True 4046 lncRNA 0.44 2 12874551 12878653
TU114135 False 2601 lncRNA 0.43 2 12796664 12880735

Neighbor

gene id symbol gene type direction distance location
dgat2 dgat2,LOC107746984 coding downstream 16875 12771426 ~ 12779789 (-)
vps26bl v26bl,LOC107588734,LOC107751386,LOC107691644,LOC108423787,LOC105024202 coding downstream 286756 12505012 ~ 12509908 (-)
fez1 fez1,LOC107691643,LOC107751387 coding downstream 295815 12491670 ~ 12500849 (-)
robo3 robo3,LOC107577175,LOC107751391,LOC107589390 coding downstream 365785 12311190 ~ 12430879 (-)
LOC122352422 pknox2,LOC107686111,LOC107691639,LOC107747045,LOC107686209,LOC107751409 coding downstream 513077 12217090 ~ 12283587 (-)
trim37 trim37,LOC107686133,LOC107577452,LOC107691657,LOC107589414,LOC107728810 coding upstream 3465 12884200 ~ 12900007 (-)
rabgef1 rabgef1,LOC107734461,LOC107577469,LOC107728875 coding upstream 20317 12901052 ~ 12908439 (-)
kctd7 kctd7,LOC107588867,LOC107686134,LOC107734471,LOC107577526,LOC107691660 coding upstream 27836 12908571 ~ 12912532 (-)
cux1a cux1a,LOC107728840,LOC107588830,LOC107734438,LOC107691661,LOC107686135,LOC107577496 coding upstream 34448 12915183 ~ 13028810 (-)
LOC122353147 LOC107686215,LOC107588848,LOC107728832,LOC107691662,LOC101885935,LOC107578652,LOC107734424 coding upstream 155299 13036034 ~ 13051363 (-)
G76912 NA non-coding downstream 118039 12678367 ~ 12678625 (-)
G76902 LOC107746985,LOC107751382 non-coding downstream 186566 12605219 ~ 12610098 (-)
LOC122353234 NA non-coding downstream 343013 12448542 ~ 12453651 (-)
G76755 hspa8,LOC100305036,LOC101075813,LOC105019107,LOC107662768,LOC107693988 non-coding downstream 1030454 11701871 ~ 11766210 (-)
G76693 NA non-coding downstream 1310236 11485906 ~ 11486428 (-)
G77153 NA non-coding upstream 140918 13021653 ~ 13103059 (-)
G77157 NA non-coding upstream 153006 13033741 ~ 13035585 (-)
G77208 NA non-coding upstream 329881 13210616 ~ 13210946 (-)
G77220 kl,LOC107577734,LOC107589796,LOC107728890 non-coding upstream 432459 13313194 ~ 13315574 (-)
G77245 NA non-coding upstream 447907 13328642 ~ 13328893 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 7569 12782353 ~ 12789095 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other downstream 27247 12678990 ~ 12769417 (-)
ccdc83 NA other downstream 1211704 11505310 ~ 11584960 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 1589412 11176569 ~ 11207252 (-)
G76625 NA other downstream 1757933 11017110 ~ 11038731 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 611538 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 657421 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 762449 13643184 ~ 13654413 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other upstream 925369 13806104 ~ 13807819 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 1321527 14202262 ~ 14204127 (-)

Expression


Co-expression Network