G77284


Basic Information

Item Value
gene id G77284
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13486267 ~ 13488833 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU114322
ACGTGTGGAGTCGTTGATCTCCATCTGTGCCAGGAGTTTGCCATTAATGCTGAAGTTACAGAAATGTCCTCTCTCGTAGTAGATGATACAGTGGCCCTCACTGGATACAGAGATCAGGCGAGTCCCAGTTCagcacacactgacacacacaccacctcaTGGTCATGGCCCGTCAGAACTGCTCTAGGTGCTGGATAATCACCTAAAATACAGCAGAAATTTAGATTCTAGATTAGAATTCTAAAAACTAGTTAGAAGGAATGAGATGAAGGcaagaaagcagaaaaaagaaatgaattaaataaaatttctcAGAGACAGTTCTCACTGTTGTTGGGATTGTCTCCGATGATGTGGTGTCGTCCGCTCCAGTACCACAGCAAAAGGGTTGCATCTCGTGAGCCAGAGACAATGTAGCAATCACCTCCAATGTAGGACTCGGATCGTGCAAGACAGGTCACCACATCCCAGTGACCAAACACAATCTGAGTGAGTTTCCCTGAATGAAGAGTGAGCAGATGAGCTTATACGCACatagacattttatttgtagtaaagaGCGAAAGTTTTTCTATACGTATAAGTTGGTATACAAATGGcataaaaatcactaaaaacacAAGCACCTGTCTCAGTGGAGTAAACACGGAAACTCTTGTCCCAGAAACCACATGCTAGGATGTAGCGGTTGTCGGCTGTCACCACAAAGCAGTGCGTGTTGATCTGAATGCTTTGATCCACCAAATCTGTGATCTGCCTTTTACTAATGCCAGAGTTATTGGCTGGGAAAGAAAGCACAGACCAGGTGTGATTATTGGAAAAATATCCAGTTTGAGTCTGAAGATACAACCAAGTTTCATCAGACTTTTAAAAGGACATTCTAgaatttactcactctcatgtcattgcaaacctttttacatttctttcttctgcagaacatagATGGTATTTTGAAGAAGGTTGGCAACCAAGCAGTTTCTGTTCCCACTGACTTTAATTTTATAGACTGAAacttaccaacattcttcactTTTTTAgttgaactatgcctttaactGAAGGAATTTCAGGCTTAATGACCCGAGTTACTTGCTAAACACATGGTCACATGATCTGAGGAACTCACCAATCAGAGAATCCATCTCAATAGGAAGGTGATGAGCCTGTTCTAATGAGTATCCCGGAGCACCTCTGAGacctaaacaaaacattaaaaaatgtggtTTGAAACCTCAGATTTCTTTAGCTGTTATGTCTAAGAAAGTTGGTTGTACTCACCGACTGTGTTGTGCCAGCGGTTGACGGCGAAAAGCCGGCTGCATGTGACCGTGACCGCAGCGGGAATGCTGAGGTGAGGCAGCGTGTTGGCCGCGACGTGCGTGACAGGAGAGTTGGAGGGGAATTTTAGCACCATGATTACATCTTGCTGCATTTGGTCCTTGAACATCAGAGGACTCTGAGGAAGGAAACACTAatgagcagaagagagaaagaggaggaggaagaggaggaaaatTTGggaagaaaagggaaaaaggaaGGGACAAGGAATTAGAAAGGTAAGTTACAATGGAGCAACAAGGAGAAAAACCACAGGGTGGGATTCTGGGTATAGTTTAGGATCAGTTTTGGGTTGGTTTGGACTGTCAGGAGGGGCAGCTTGGGTGACGTGTGTAACATCCAACCCTAGACAGTCTTCTACGTGTAAATCAGTGTCCGAACCAGTTATACATACAAACTGTCATTTTATAGCTTTGTGGCACCACTTGGCATTTATGGTACagataaatgacaaaatttggTCCATTACAACTAACTGCGATTCTGAGctacataaaatgaaagtaataaaGGCAAATCGTGATAAAAGatgtaataaatcaaatatcaaGAGACaacattgattatttaaaagAGATCTAATATAGATAACtgataaaaaagtaatgaaaaggcataataaaagaaatacaataaagtCTCACCAGGTGCATGGCGGAGCTGCGTGGAGGGTGAGGCTCTATTAGCAGCTGTGATGGAGCCTGTCCAAATGACTGAATCTGAGCCTCCGTAGactaaaaatatgacaaaagagacaaaacaagCTGTTACATCTTTAGCTGACATACCCCTGAGCTGCCTCACATCTGACAGACATTTAAAGACGCGGACAAGCTGAACACTGCTGTCAACACACTGTGCTTcgaaatcaaataaacaaattcactCATTTTGGACGGAGGAGAGAAAGATTTTGACAGGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114322 True 2267 lncRNA 0.42 2 13486267 13488833

Neighbor

gene id symbol gene type direction distance location
rfc3 rfc3,LOC107589808,LOC107728889,LOC107577751,LOC107691679 coding downstream 162378 13319875 ~ 13323889 (-)
zar1l zar1l,LOC107686155,LOC107589787,LOC107728846,LOC107734432,LOC107691709,LOC107577757 coding downstream 175192 13309532 ~ 13311075 (-)
hunk hunk,LOC107686151,LOC107728887,LOC107734458,LOC107577711,LOC107691675,LOC107588971 coding downstream 300076 13178586 ~ 13186191 (-)
eva1c LOC107686146,LOC107588947,LOC107728854,LOC107734450,LOC107691670,LOC107577635 coding downstream 317052 13164709 ~ 13169215 (-)
si:dkey-18a10.3 LOC107588952,LOC107686147,LOC107735317 coding downstream 324748 13156144 ~ 13161519 (-)
ccdc169 LOC107686219,LOC107728839,LOC107589822 coding upstream 44918 13533751 ~ 13537968 (-)
ccna1 ccna1,LOC107728895,LOC107686159 coding upstream 55211 13544044 ~ 13546323 (-)
smad9 smad9,LOC107728873 coding upstream 69645 13558478 ~ 13565616 (-)
alg5 alg5,LOC107728859,LOC107697411,LOC107589073,LOC107577823 coding upstream 77711 13566544 ~ 13571292 (-)
supt20 supt20h,supt20,LOC107728858,LOC107589048,LOC107697409 coding upstream 85598 13574431 ~ 13588126 (-)
G77245 NA non-coding downstream 157374 13328642 ~ 13328893 (-)
G77220 kl,LOC107577734,LOC107589796,LOC107728890 non-coding downstream 170693 13313194 ~ 13315574 (-)
G77208 NA non-coding downstream 275321 13210616 ~ 13210946 (-)
G77153 NA non-coding downstream 383208 13021653 ~ 13103059 (-)
G77157 NA non-coding downstream 450682 13033741 ~ 13035585 (-)
LOC122352841 NA non-coding upstream 59421 13548254 ~ 13556657 (-)
G77294 NA non-coding upstream 66723 13555556 ~ 13556192 (-)
G77315 NA non-coding upstream 181139 13669972 ~ 13670446 (-)
G77349 NA non-coding upstream 302488 13791321 ~ 13791934 (-)
G77347 NA non-coding upstream 311180 13800013 ~ 13800912 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 697172 12782353 ~ 12789095 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other downstream 716850 12678990 ~ 12769417 (-)
ccdc83 NA other downstream 1901307 11505310 ~ 11584960 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 2279015 11176569 ~ 11207252 (-)
G76625 NA other downstream 2447536 11017110 ~ 11038731 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 3440 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 49323 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 154351 13643184 ~ 13654413 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other upstream 317271 13806104 ~ 13807819 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 713429 14202262 ~ 14204127 (-)

Expression


Co-expression Network