G77480 (LOC107575404,LOC107692500,LOC107728752)


Basic Information

Item Value
gene id G77480
gene name LOC107575404,LOC107692500,LOC107728752
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14424513 ~ 14425487 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU114626
NNNTGCAGGTCCTTCAACATCTacatctcctcctgctcctcctcctgGCAGAGAAATATCTATAGTGGGCATGTGAAACTTTCGACCTTTCATTTCGGGACCTTCAACATTGATTTCTCCTGCTGATGGTTTGAATTTAGGCAAAGAAACATCAAATTTaggcatttcaaattttcctccttttcctgTATGTCCTTGAACATCTACATCTCCCCCTGTTTCTCCTCCTGGCAGAGAAATATCTATAGAGGGCATGTGAAACTTTCCACCCTTGATATCTGGGCCTTCAATGTTGACTTCTCCTGCTGATGGTTTAAATTTAGGCAAAGAAACATCAAGTTTAGGAAGTTCAAattttcctccttttcctgTATGTCCTTGAACATCTACATCTCCCCCTGCTCCTCCTCTTGGCAGAGAGATATCTATAGAGGGCATGTGAATCTTTCCACCCTTGATATCTGGGCCTTCAATGTTGACTTCTCCTGCTGATGGTTTAAATTTGGGCAAAGAAACATCAAGTTTAGGAAGTTCAAattttcctccttttcctgTATGTCCTTGAACATCTACATCTCCCCCTGCTCCTCCTCTTGGCAGAGAGATATCTATAGAGGGCATATGAAACTTTCCACCTTTGATATCGGGACCTTCAACATTGATTTCTCCTGCTGATGGTTTCAGTTTAGATAAGGAAACATCAAATTTaggcatttcaaattttcctccttttcctgCATGTCCTTGAACATCTACAtctcctcctgctcctccttcTGGCAGAGAGATATCTATAGAGGGCATGTGAATCTTTCCACCCTTGATATCTGGGCCTTCAATGTTGATTTCCCTGCTGATGGT

Function

NR:

description
PREDICTED: neuroblast differentiation-associated protein AHNAK-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114626 True 861 lncRNA 0.42 2 14424513 14425487

Neighbor

gene id symbol gene type direction distance location
LOC122352756 ift46 coding downstream 139431 14280933 ~ 14285082 (-)
LOC122352754 NA coding downstream 143625 14278117 ~ 14280888 (-)
LOC122352755 NA coding downstream 147181 14273650 ~ 14277332 (-)
LOC122352549 or110-2,LOC107741167,LOC107686205,LOC107579177,LOC107686207,LOC107589615,LOC107589600 coding downstream 352174 14071380 ~ 14072339 (-)
LOC122352546 or110-1,LOC107579177,LOC107697404,LOC107589615,LOC107686207,LOC107736199 coding downstream 354880 14068591 ~ 14069633 (-)
dhrs7ca LOC107758776,LOC107654658,LOC107552132 coding upstream 59842 14485329 ~ 14488534 (-)
si:ch211-165g14.1 LOC107726816,LOC107573383,LOC107673826 coding upstream 107000 14532487 ~ 14540838 (-)
mfsd13al zgc:171489,mfsd13b,LOC107726812,LOC107573382 coding upstream 116043 14541530 ~ 14546151 (-)
sdr42e2 sdr42e2,LOC107726803,LOC107654653,LOC107717482,LOC107552104,LOC106592406 coding upstream 129510 14554997 ~ 14568193 (-)
mosmoa c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding upstream 165532 14591019 ~ 14611223 (-)
G77476 NA non-coding downstream 55958 14366281 ~ 14368555 (-)
G77472 NA non-coding downstream 62779 14361354 ~ 14361734 (-)
G77456 NA non-coding downstream 131795 14291853 ~ 14292718 (-)
G77432 LOC107744607,LOC107691628,LOC107693969,LOC107747009 non-coding downstream 279209 14144891 ~ 14145304 (-)
G77390 NA non-coding downstream 327378 14059439 ~ 14097135 (-)
LOC122353010 NA non-coding upstream 34881 14460368 ~ 14465320 (-)
G77514 NA non-coding upstream 70011 14495498 ~ 14497454 (-)
G77669 NA non-coding upstream 676662 15102149 ~ 15103569 (-)
G77672 NA non-coding upstream 713120 15138607 ~ 15139007 (-)
G77674 NA non-coding upstream 730862 15156349 ~ 15156591 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other downstream 81501 14340046 ~ 14343012 (-)
G77443 NA other downstream 160191 14234506 ~ 14264322 (-)
G77441 dlg1l,LOC107653521,LOC107705307,LOC107660320 other downstream 216507 14204416 ~ 14208006 (-)
G77440 dlg1,LOC107738847,LOC107659037 other downstream 220386 14202262 ~ 14204127 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other downstream 616694 13806104 ~ 13807819 (-)
LOC122353009 LOC107562038,LOC107562041 other upstream 41699 14467186 ~ 14481449 (-)
im:6904045 NA other upstream 59312 14484799 ~ 14485292 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other upstream 142843 14568330 ~ 14589899 (-)
G77671 NA other upstream 681650 15107137 ~ 15107752 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other upstream 804482 15229969 ~ 15289672 (-)

Expression


Co-expression Network