G77715


Basic Information

Item Value
gene id G77715
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15644403 ~ 15647863 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU114936
ctcttttaaataattttattcattccGTCTATTTCTTGACAACACAAactgtatagttttttttttttttcagggatcCCACAGTGCGGCCAGCGCATTTAGGATGTGCACTGACTGTAcacaacatatacatacattgcAGTATacttgtgtgtatatacatctggtaaagaaaactttaaataatttttaaaaaagcctcaatacatattcatttttctttctttcaatgtatcaggaaaaacaaaaaacaaagaaaaacccgGTGCATTGTTATCTCAGTGTTTTACTCCTAGACTTGACATGGCCTTAAAAAAATACCACATATGAATTTCTAAACCATCTGGACCATAACAGTCATGGCCATAGAAAAGCAACCATCCTGTCTGTGCATATAGTCTACGGTAAAAAACAATACTGTTAGCAGAActtgaaaaataatacttttaggGCCTGACAGTGAGCAATGTGGCACCATTGCTGTGGCCTCCCAGTGCTTGACATCAAAAGACACTATGCCTTCTAAATCACCCGTGCTTCCAAACCCAGCAGGATACATTCAAATGAATGATCGTCTTTCAGCTAGAAAATACATTCGCACATAACGGTTCATGTGGAGTTTCAGTGGTCCTTGCACACTCTACTTGAACACACATTGCACATTTAATACtgcatattaatttaatgagaaTGAATATAGACATGAATGAACTGTAGTCCCTGTTACGGATTGATTTTAGGAACATAACCatcatgaataatgcattttgcGTGTGTCTGTTCTTAAcggttaactgaaataaacggTACAAGTTGATCGCTACAGCTCGCAGgtgctatttttacatttccgaACTGGCCTTGTTGCTATTAAATAAGAGGTCTGCGACTAAAGCCGACACAGGGATAGAAGAGGCTCCAAAGTCACCCACGAGACCTCACAGAGGTGAGGATCTAAGATCCAGTAGTTTTGAACAAATTGCACTGGTTCATATCCATTCGGGAAGTCATGTTCTGGGCTAGATATTTCTTCACAtcagttcatattttggtttaaaCAATGCCAGAGACAACTGGACTcataaatgaactgaaaacaagttGATTCAATGTCAAAATCTACATTATTCAGAAACTAGGACTTTATgtttataatatgaatataaagacTCCACAAAAAgcacttcatatttaaatattcaacttTAGATTGTAAAATTGCTGCTTAGAAATAGATCTACTaattctaattttcattttggcctTTTAGAATTAAGGATTTCAATGATTCCTGATCAGGAAGAAAGGAGGGGAGGGGCAGAATCAGGAAATTGGCTAGACTCAAACCCATGTCGCCCACATGAGCACCATGGCTCCATATCAACAGAGGCCACTTTAGGATCACAGCTCcttctataaataaatcatctaCTTGTGTGTTGCAATTTTgtatgagaaaatgtttttgcgTAAGATACGTCAAGTGGTTTTAGTCAATTTgaccattatttttattatattgccaAACTTTCTAGACCGTTTCTCTTTGTAAATTCAAGCATAACCTGGATTTTTCACAGTTCAGTCTTAACACACTCACTGCTGGTCTCTCTATACTGCAAAAAAACGCTTTTGAAGACTAGATTATTTTGTTGCTTCCAGCCCAAATATctaacaattattaaattaaataaatcatggaTCTTGTTTTCCGTATGAAACAGGATTGTTTTGCTTAGCCCACTGACAGATTATGTTGCTtctttcaagtaaaaaaaacaagacaaaattttaGTCtcgaaaagcattttttgcagtatATAAGAACAcatcaaaatacatttctgtccAGCTCTACGATACCAACAAAAACTATGTTAAATACTTTCTGACATCAAACGACCAATGTGCATCTCGCACCTGTCCAGCAGCTGGTTCagcatcaaaacacaaaaacgacatataaaaacaaacaataatcaCGGAATGGCTTTAAAATCAAAGCTTGGCAATACGAAGTTGTTTACAGCTGCCCACAGGATATAGACGGATCCTGAGGGAgaacagaaacacattcatgtaacaataattcattcacaaataaatggaTGCAATTGGCTGGGGAGTACCTGCTGTAGTTAACCACTGCATGAGAGGTTTGGTTGACTTGACGGCTGCATCCCAATTCCCATACTCTTCCTCGTAAGAGAGCGCTGAAGTGACGGTATATTTTTGCAGGCTAGAAATCTGCATCAACCTGGTTCCCTCTACAAAAAGGATTTTTCCATTGGCTTTTGGGTTATTGCAGACAATAAGCTCTGAGAGCAACGAtgaaaattcacattttgttcATCATGATATCTTCGacaattaacaaaatgtaaagacATCTGAATCCTAATTGCCAGAGGTAAAAATGAATGTGAGCTACTGTAGAAACGGACTACTTTCTTATTTAATAGTTGAGCaactgtctttttaaagacaaatttgcGTCCCGCTCTCAAACTCAGGCCAATGGCTGAGCAGATGTTGCAATAACAAGCTGTTTAGACAGTATTTTCACCCTATTTCCATATAACTTACTGGGAAGAGGAAAAAAGTATCCCATATgcctaaaaatatgaatatctCCAAGTATGGACTGTGATAGCGCAGCAGTATGGAAACTGGAATGCAGCCTGATGCTTAGTAGATGGAACCTCAGAGTCCGTGGCTCTCTTGTCATCGCAAATCAACCAATCGGAGGAAGTCATTCCTCCAGACAGGGGTGGATATACCAGTTGCATATAGTTGATACACCATGGCGCAAGCTATCAAGGAACCAGCCTTGATTCTCCATGGAAGCCTGTTACAAATTAACTCTGGCAACAAATATAGCTCTACATAGAAATGATATATTTTCATGTGTATCATAATATCATTCGTttccatattttgtttttataaataaacatgtacaCGTCCACATAACATTTGCTGATAGTAACTCCGTATTTTCTTTATCTGGTCCCAGACTccaaaaggtttaaaaaaggGATGCTGCAGAGTTCCAACATCCGCTCAAGTTTTCCGAGTGTTTAAACCAAAGAGTCTGTGTCTTTTTTCGAAGTGACAGTTGAATTGTtttggtgtgtttgttttagccCTGGGTAAACGGACAGATTCCACGATCACGGGACTGCATTCCATCATTGTTTCTTTCATCGCAGAGAAGAAATTACAGTACTGGGTTTCCTTCGGCATCTGTCCGGTCAGTGCCGCCCACTTACCATGCCCCGGCCCAGCTCATCCGGTCATTTACATGTGGAGGTGTTCATTGCACTGGCTGAGCCGGGACTCTGTTTGTCAGTGATAGCGACTTCTCCTTTCTTCACTGTCTGAGTCGTAGTCTCTCAGCCCGATACCTTTCTGTAGCTTCATTAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114936 True 3428 lncRNA 0.38 2 15644403 15647863

Neighbor

gene id symbol gene type direction distance location
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding downstream 282127 15347467 ~ 15362276 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding downstream 302438 15316648 ~ 15341965 (-)
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding downstream 328535 15307899 ~ 15315868 (-)
LOC122352451 LOC106676183,LOC106674878 coding downstream 337995 15305535 ~ 15306408 (-)
LOC122352450 NA coding downstream 528955 15111412 ~ 15115448 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding upstream 35408 15683271 ~ 15684293 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding upstream 47557 15695420 ~ 15697678 (-)
LOC122352458 NA coding upstream 57362 15705225 ~ 15706280 (-)
LOC122353072 NA coding upstream 65518 15713381 ~ 15714427 (-)
LOC122353050 NA coding upstream 68921 15716784 ~ 15717845 (-)
G77706 NA non-coding downstream 249851 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 275727 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 297114 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 368399 15273913 ~ 15276004 (-)
G77676 NA non-coding downstream 484556 15159465 ~ 15159847 (-)
LOC122352661 NA non-coding upstream 179221 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 183344 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 191650 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 192488 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 255024 15902887 ~ 15912782 (-)
G77702 NA other downstream 286171 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 354731 15229969 ~ 15289672 (-)
G77671 NA other downstream 536651 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1054504 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1159111 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 244781 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 368808 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 382664 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 524615 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 768045 16415908 ~ 16490354 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002361 NA non-coding NC_007121.7 CM002894.2 40122374 ~ 40281002 (+)