npffr1l1 (npffr1l1,LOC107658551,LOC105907118)


Basic Information

Item Value
gene id npffr1l1
gene name npffr1l1,LOC107658551,LOC105907118
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15892644 ~ 15897232 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115089
catcctttttactttttcacaGCTTACAATCATAAGCGGGTTCTCACTCGGAGCTGGAGCCGAGCCTCCTTCGAGAACAACACGCCAAGTTCACTTATTAATATCTAGCAGGACTAAATGGgcatttttcacagttttaccCAATTAAGAGAACGGGTTTGAACGTGTTTCTCAACGCATCGCCAAGCTCCACAACCTGTGATGTTTGCGCGCGCATACCAGTTTAGAACATTCTTCacgaattatttttttttttttgtacaacaaCACACCATCCGGTCGCATTTGAAAATATGACCTAAAACAGCGCACTTTCATTGGCGGCGGTGCCTGCTGTCACATCGCGTCAAATTTCACGTGTTCCGTGTGAAGATGTTCGGTCCTGTCCGCCTTTCATACGGAGCCCTGCAAAAAAGCACGGAACCAGTTGCGCATTGCAGCCGGGGCACAGAAGACGGCAACCTGTTCACCAGACCAGtggatttaatacatttcaccTGGTAGAAGCAACAGatccaaaatgaacaaaatgaccCTGAATCGCTATGCCGCCAACCTCACTTGGGACAACTGCACTCTGCTGCCGTATTACATCCACTCGGCTGGGATCACGGTCGGCTACATCCTCTCTTACCTGCTGGTGCTGCTGCTGTGCGTTCTGGGGAACGGACTCGTCTGCCTGGTGGTCATCAAGAACCGCCACATGCGCTCGGTCACTAATCTCTTCATCCTGAACCTGGCCATTAGCGACCTGCTGGTGGGCATCTTCTGTGTTCCCACCACGCTGATCGACAGCCTTATCTCAGGTTTATGGGGATTGTTTACCCTTTCCATCACCGCCTGAGGCCTGTCAGCGCGCTCTTCGCCATCATCTTCATTTGGCTTCTCTCTTTTGCCATCATCTTTCCTTCTGCTGCAACCATGACGGTCATTCACCTTGACGACATGTACATGGTCCGGGACAAGCAGATATATCCTCTATTCGTGTGTTTTGAAGATTGGCCCAGAGCAGAGATGCGGCGAGTCTACACCTTGGTGATCTTCATCCAGGTGTACCTGGCCCCGCTTTGTCTCATAAGCATTCTGTACACCTGCATCGCTGCCAAACTGTCCAACAACCTGCGTGAGAATCACGTCCGGTCCAAGAGGAGAATGAAAATCATCAAGATGCTCATCATGATTGCCATTCTCTTCATGGTTTCCTGGCTTCCGCTTTGGACTTTGATGCTTCTCACGGACTATCAGGATCTGGACCGCCAACAGATTGACTTCTTGAGCAGCTATCTTTTTCCCGTAGCTCACTGGCTGGCGTTCTTTAACAGTGGTGTTAATCCAATCATCTACGGCTTCTTCAACGAGAATTTCAGGAGGAGCTTCCAGGCCGCTGTGGCCTGTGGCTCCTGCGGATCTTTCATGTTGAAGATGTGTCACACACAGTTTGTTCTGCTGCCTCCTAACAGAGTATCTGACGGGAACCATGGCGTTAA
>XM_043251156.1
ttaaataattcaaaaaaagtTCCAAACTGCTTCGAGAGAAGCCTAAATCTTTCAGTCCTGTCAAacaagtagaaaaaaaacaccgtTACAGCAAGATTTCCAGAGCCCTCCGCccccccttttttttcctcctccatcctttttactttttcacaGCTTACAATCATAAGCGGGTTCTCACTCGGAGCTGGAGCCGAGCCTCCTTCGAGAACAACACGCCAAGTTCACTTATTAATATCTAGCAGGACTAAATGGgcatttttcacagttttaccCAATTAAGAGAACGGGTTTGAACGTGTTTCTCAACGCATCGCCAAGCTCCACAACCTGTGATGTTTGCGCGCGCATACCAGTTTAGAACATTCTTCacgaattatttttttttttttgtacaacaaCACACCATCCGGTCGCATTTGAAAATATGACCTAAAACAGCGCACTTTCATTGGCGGCGGTGCCTGCTGTCACATCGCGTCAAATTTCACGTGTTCCGTGTGAAGATGTTCGGTCCTGTCCGCCTTTCATACGGAGCCCTGCAAAAAAGCACGGAACCAGTTGCGCATTGCAGCCGGGGCACAGAAGACGGCAACCTGTTCACCAGACCAGtggatttaatacatttcaccTGGTAGAAGCAACAGatccaaaatgaacaaaatgaccCTGAATCGCTATGCCGCCAACCTCACTTGGGACAACTGCACTCTGCTGCCGTATTACATCCACTCGGCTGGGATCACGGTCGGCTACATCCTCTCTTACCTGCTGGTGCTGCTGCTGTGCGTTCTGGGGAACGGACTCGTCTGCCTGGTGGTCATCAAGAACCGCCACATGCGCTCGGTCACTAATCTCTTCATCCTGAACCTGGCCATTAGCGACCTGCTGGTGGGCATCTTCTGTGTTCCCACCACGCTGATCGACAGCCTTATCTCAGGTTGGCCTTTTAGTCAGATCACCTGCACCATGAGCAACATGATCCAGGGCATGTCCGTGTCTGCTTCTGTCTTCACCCTAGTTGCTATAGCAGTGGACAGGTTTATGGGGATTGTTTACCCTTTCCATCACCGCCTGAGGCCTGTCAGCGCGCTCTTCGCCATCATCTTCATTTGGCTTCTCTCTTTTGCCATCATCTTTCCTTCTGCTGCAACCATGACGGTCATTCACCTTGACGACATGTACATGGTCCGGGACAAGCAGATATATCCTCTATTCGTGTGTTTTGAAGATTGGCCCAGAGCAGAGATGCGGCGAGTCTACACCTTGGTGATCTTCATCCAGGTGTACCTGGCCCCGCTTTGTCTCATAAGCATTCTGTACACCTGCATCGCTGCCAAACTGTCCAACAACCTGCGTGAGAATCACGTCCGGTCCAAGAGGAGAATGAAAATCATCAAGATGCTCATCATGATTGCCATTCTCTTCATGGTTTCCTGGCTTCCGCTTTGGACTTTGATGCTTCTCACGGACTATCAGGATCTGGACCGCCAACAGATTGACTTCTTGAGCAGCTATCTTTTTCCCGTAGCTCACTGGCTGGCGTTCTTTAACAGTGGTGTTAATCCAATCATCTACGGCTTCTTCAACGAGAATTTCAGGAGGAGCTTCCAGGCCGCTGTGGCCTGTGGCTCCTGCGGATCTTTCATGTTGAAGATGTGTCACACACAGTTTGTTCTGCTGCCTCCTAACAGAGTATCTGACGGGAACCATGGCGTTAACCGCAGCAAGAGGAAGGAGCGGTGCCTCACTGTAATGCCACTGGAGATAGGTCACGGTATTCAGGGAATTCTCCTTGAGGACAAGAATGATAATAGAAATTCTAATAAAGTTGTTGGAGCCTGGATGGAGTGAATGGTGCAATCAAGGAGTTTATAAACCTAGTAAAAAATAGAGCATTCCCATTTCGCTTGAAACAGCATCACACCAGTTTATTCTTTGGTTCTGCTTGAAGTATTTCAGAGccttcaaataaattcagcataTTCAAGACAGTCTATTTTAGTGGTTTAATTGAGATTTTGCTGGCTTTCCTTATGTAAAGAAAGGTTTTTCCTTATTCCAGACACAGAGAATGTATCACACATGACTGGGACGAGCAACCAATACGCTCATACctaaaattgttatatttattaaaggcattaaaattatgttgtaaatacaaatatttattcatgattttaccttaatttttccttttcagcgtaatttaaaaaagttatatatgcatatttatatatttttatttatttatttattttatatgcgtaaagtaatgcattagtTATTCTCTCAGAAAAAATCTACACAGATGGaaactgtttttgcttttatgtaATCGTGTAAAGACACCAGTGAATACAGGAGAGCAGAAAACTTTAGTGTATGCGTGATTATGTGTGGATATGAGGAAGGTATATTGTgtccattattataaaatgacgTGACGTTTTGAAGGgaaatgtaaaacacaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgcatataatgtgttataattGTATGTGTGGTGACACCATGCCATTATTGTTATATGAACAGAATTCTTATCAGTGTCAGTTCAGTTCTCGTTAAAATTCACTTCAGAAAGTGTTATTACCTTTGAAAGCACCAGATGTTATGTTGCTGATACGTTTTCATGCATAATGTTAACCTTTATATAAGTTACTGGAACTATatctaaagaaaaaataaagtgaaatg

Function

symbol description
npffr1l1 Predicted to enable G protein-coupled receptor activity and peptide binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within neuropeptide signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human NPFFR1 (neuropeptide FF receptor 1).

NR:

description
neuropeptide FF receptor 1 like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115089 False 1487 TUCP 0.49 3 15893683 15897098
XM_043251156.1 True 2760 mRNA 0.42 4 15892644 15897232

Neighbor

gene id symbol gene type direction distance location
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding downstream 2154 15872490 ~ 15890490 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding downstream 28114 15862177 ~ 15864530 (-)
LOC122352473 pim3,LOC107732271 coding downstream 42652 15847789 ~ 15849992 (-)
LOC122353200 pim3,LOC107732271 coding downstream 54264 15835096 ~ 15838380 (-)
LOC122353239 taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088 coding downstream 70657 15820992 ~ 15821987 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding upstream 34723 15931955 ~ 15958445 (-)
brf2 LOC107746211,LOC107658585,LOC107758611,LOC107558130,LOC107689884,LOC107682650 coding upstream 92361 15989593 ~ 15993972 (-)
rab11fip1b LOC107758672,LOC107689050,LOC107746209,LOC107583401 coding upstream 97680 15994912 ~ 16009528 (-)
gpat4 gpat4,LOC107746208,LOC107758670,LOC107689060,LOC107558124,LOC107658586,LOC107583403 coding upstream 123845 16021077 ~ 16029140 (-)
ggt1b ggt1b,LOC107758666,LOC107689091,LOC107602052,LOC107658554 coding upstream 184738 16081970 ~ 16095356 (-)
LOC122352598 pim3,LOC107732271 non-coding downstream 50107 15840351 ~ 15842537 (-)
LOC122352641 NA non-coding downstream 52578 15839513 ~ 15840066 (-)
LOC122352573 NA non-coding downstream 60718 15831207 ~ 15831926 (-)
LOC122352661 NA non-coding downstream 65088 15827084 ~ 15827556 (-)
G77715 NA non-coding downstream 244781 15644403 ~ 15647863 (-)
LOC122353197 NA non-coding upstream 5655 15902887 ~ 15912782 (-)
LOC122353198 NA non-coding upstream 17816 15915048 ~ 15917942 (-)
G77827 NA non-coding upstream 23689 15920921 ~ 15921360 (-)
G77830 NA non-coding upstream 29954 15927186 ~ 15927498 (-)
G77831 NA non-coding upstream 30860 15928092 ~ 15928317 (-)
G77702 NA other downstream 534412 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 602972 15229969 ~ 15289672 (-)
G77671 NA other downstream 784892 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1302745 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1407352 14484799 ~ 14485292 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 119439 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 133295 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 275246 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 518676 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 535295 16432527 ~ 16437594 (-)

Expression


Co-expression Network