G77947 (LOC107689250,LOC107689777,LOC107602036,LOC107758655,LOC107602063,LOC107758576)


Basic Information

Item Value
gene id G77947
gene name LOC107689250,LOC107689777,LOC107602036,LOC107758655,LOC107602063,LOC107758576
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16245655 ~ 16252193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115318
ttagttttattgttgtcATTTAGGTCAGTTATGTCCCCAGTCATTTCATTTGCAAAGATGACCCATTTCAGGCTCTTCTTTTACATGACCATacttgttatatttaataacgAACGTCAGTAATGCTTATATTcttaaattgtaaattatttaaatggttCTTGATTACTTTAAGTATATACACGCGTCAAAAGTGTTGGGCttgtcatttatcatttatatatttaaaaaaaaaatcagtctttACATTTGATCAACTCcttgctaaaataaaagtatatgtttctattataaataaaaatattaatttgggTTTTcgattaatcaaaaataataaattatttttacatttttattttatcaagcAGCACTACTCTTATAAGCactgataataattaaaaaaatgtttattgagcacaaaatcagtattaaaatgattataatattttatggaaaAAGATCATATGATCAAAAcagctatttaaataaaaatgatatgtaatgttgtttattttaatatttattttatttaataaatgtagcaTTAGTCAGCCTTGCTCAGCATGagacatatacagtatatatttggaaaatatttacatttatacatttattttttcaaatatatatacatttataatacattatatacataatgagGTAGCAATAGCAAAAACACATGACGCACTAAAAATGCACATCATTTCACGTTATGCAAATTTCTCAACCGCTCACTTCCTGCTGGACATGAAACTTTACGTGACATGACGTCACTTGATTCATTATCAGTCTGCTGTGAGATACTTTGAGAGATGCTACAGAAGAGTTAAGATGAATCACATAATCTTGCAGTCAGTGTCTGCTCAGCTGATGGAGCTCTTCCGTGATCGTTTGGGTTCATCGATAAGCTGCGTTGCTGCGAAGGTCAAACGCAAATCTCCTTCTGCTGCCGTCTTTCTGAACGGGAAAACCTCTCTGGTAAATCGAGTCACAAAGCAAGGCATCTGCTTCTTGCCGCCCAACGTTTTCCCTCTGGACTCAAAGTTGTAGGCCACCTGGTAGTTTATTCGAGTCAGAAGTCTTGTGATCTCCAGATCTGGACCTCCTTCATCTTCTAGAAATTTACAAAAGGTTTGAATCAGCTCCGAGCCCAGAGGATGCATGAATGCACCGTAACCTATAAAACAAGCGAGCGTGAGTGAAGAACTGAAGAGTTTGTAACTTCACAAGCTATGCAAATGATGTGGAGAGTTAATAAATCACACCTGGAGATGTGGCGTACATGACTGCTGTGTCGACAGGAATGGAAAACAGCCCAGATATGCCGTCCTCTTCCTCTGAGGATGAAGAGTCTGTCTCCACCTTCACACCTTCATCCAGCTCACTCCCTCGACAAGCCTGGAGAGCAGAGAGATATGATAATCATAAACATGCAGTGAACATTTAACATCCATGCATGACTTGgtgaatgcaacatttttagatttcaaaTGCTCGAGGAGTACTAAAGAGTCAAAGGATTTCTAGAGTAGAATGTATTATCAACAAAACCGCCAATATTCGCTGAAGTACAGGATCTTATGCCAGAATAGGAGTAAaacggtttccacaaaatgtACCTGGACCAGAAAGAGCTTGCTCTTGTCTGCCATTGAAGGTCCTCCAAAGCAGCTGTAGATCTCGACCAGTTTCACAGCACGTCCGTCAGCGCCGAACACAACACCCTCCTCACCGTGACTCGATATGACTCCCAAAAAACACTCTTTCACTGTCTTCTTGCTCTCTGAGGATGAAATGCAAGTTAGCaagttttctgaataaattgtGCAAGTTACTCTGATTGTTACAATACAAGAACGTAGGCTACCGTGATTATCATAGTCAGGACTAATTCATATTGACACAATATTTTCTGTGCAAACTCACTCATAGAGTTATAATCGCATTTAATCTGTGCTTGCTAATAATTTACTGTTAAACACgaatttagaca

Function

NR:

description
PREDICTED: caspase-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115318 True 1993 lncRNA 0.36 2 16245655 16252193

Neighbor

gene id symbol gene type direction distance location
dusp11 dusp11,LOC107602062,LOC107758654,LOC107689237,LOC107558079,LOC107565330 coding downstream 1622 16240176 ~ 16244033 (-)
stambpa stambpa,LOC107758608,LOC107658597,LOC107558102,LOC107746197,LOC107689905,LOC107602045 coding downstream 6586 16232746 ~ 16239069 (-)
ess2 dgcr14,LOC107758656,LOC107746196 coding downstream 13075 16227319 ~ 16232580 (-)
dgcr2 dgcr2,LOC107689205,LOC107602057,LOC107746195,LOC107558114,LOC107658593,LOC107758577 coding downstream 18480 16217026 ~ 16227175 (-)
car15 car15,LOC107602060,LOC107758609,LOC107689182,LOC107558080 coding downstream 31970 16209748 ~ 16213685 (-)
tcf7l1a tcf7l1a,LOC107602061,LOC107558109,LOC107658535,LOC105912913 coding upstream 4086 16256279 ~ 16283760 (-)
march5l march5l,LOC107718703,LOC107689266,LOC107602066,LOC107658605,LOC107588990 coding upstream 89836 16342029 ~ 16345823 (-)
stc1l stc1l,LOC107689312,LOC107718700,LOC107588987,LOC107658607,LOC107758648,LOC107602071 coding upstream 146660 16398853 ~ 16401534 (-)
LOC122352454 wdr45,LOC107658559,LOC107689948 coding upstream 186127 16438320 ~ 16442017 (-)
LOC122352611 NA non-coding downstream 52115 16189534 ~ 16193540 (-)
G77936 NA non-coding downstream 65760 16178600 ~ 16179895 (-)
trnag-gcc_66 NA non-coding downstream 126633 16118952 ~ 16119022 (-)
trnag-gcc_65 NA non-coding downstream 126799 16118786 ~ 16118856 (-)
LOC122353141 NA non-coding downstream 144311 16098995 ~ 16101344 (-)
G77979 NA non-coding upstream 99204 16351397 ~ 16353048 (-)
G77980 NA non-coding upstream 122027 16374220 ~ 16379551 (-)
G78010 NA non-coding upstream 142021 16394214 ~ 16395645 (-)
LOC122353043 NA non-coding upstream 243784 16495977 ~ 16497273 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other downstream 68544 16172478 ~ 16177111 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other downstream 188348 16030527 ~ 16057307 (-)
LOC122352931 LOC107758671,LOC107689893 other downstream 223881 16016671 ~ 16021774 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 348423 15892644 ~ 15897232 (-)
G77702 NA other downstream 887423 15357685 ~ 15358232 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 163715 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 180334 16432527 ~ 16437594 (-)

Expression


Co-expression Network