G77980


Basic Information

Item Value
gene id G77980
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16374220 ~ 16379551 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115372
AAAGATGTGCTGCTTTCACCCATTTGTTCCGATTAGAAACAGCCTGGAAGTGGACATGGGAACAGGAAAAACTTACCTTGTTCGGTTACTGCGGGACGTGAGTGGGCCAAGGGGAGCTGAGCTAGAATAACCCACAGGAGAAGCAAACGCCATGACTTCATCATCCTGAGAGAAGCCATGCCAGGGCAGCTGGGCGAGGAGGGTGGGCCGAGACAGCTCATTCACACAGCTGTGGGCAGCACTGGCCCATCAACACCGGCAGCATAGAGCTACCTTTAGTTTTGAGTACTTCTTGTGCTGAAGTGCACTTCGCGTGGCGATTATTTAGGTTTGTAAAGAATTACTCcaaaacaagctgaaaatatCCCACGCTGAAACGAATCAAAACAAGTCACTCCGCAAGATTTCTCTCCTGCAGCgcgcctgtttttttttgttttttactcttGTTTTTCGCAAAAAGCAGCGAGTCGCGTTTAAACCTGTTAAACCAAACGATAGGTTTTGGTCCAGGTGCGTAGATAAGCCGTGATAAAAACTTCCACGTCTTTGCCGTTTGTGAAGTTTCTCATTCATAAACTCGCGCGGGTGTCTCGCGGCAAACGGAGATTTACGAGTCGCACCGAAGGTAAACTTCTCCGAATGTGCGTGCTTGTCTCGCGCTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115372 True 668 lncRNA 0.48 2 16374220 16379551

Neighbor

gene id symbol gene type direction distance location
march5l march5l,LOC107718703,LOC107689266,LOC107602066,LOC107658605,LOC107588990 coding downstream 28397 16342029 ~ 16345823 (-)
tcf7l1a tcf7l1a,LOC107602061,LOC107558109,LOC107658535,LOC105912913 coding downstream 90460 16256279 ~ 16283760 (-)
dusp11 dusp11,LOC107602062,LOC107758654,LOC107689237,LOC107558079,LOC107565330 coding downstream 130187 16240176 ~ 16244033 (-)
stambpa stambpa,LOC107758608,LOC107658597,LOC107558102,LOC107746197,LOC107689905,LOC107602045 coding downstream 135151 16232746 ~ 16239069 (-)
ess2 dgcr14,LOC107758656,LOC107746196 coding downstream 141640 16227319 ~ 16232580 (-)
stc1l stc1l,LOC107689312,LOC107718700,LOC107588987,LOC107658607,LOC107758648,LOC107602071 coding upstream 19302 16398853 ~ 16401534 (-)
LOC122352454 wdr45,LOC107658559,LOC107689948 coding upstream 58769 16438320 ~ 16442017 (-)
G77979 NA non-coding downstream 21172 16351397 ~ 16353048 (-)
G77947 LOC107689250,LOC107689777,LOC107602036,LOC107758655,LOC107602063,LOC107758576 non-coding downstream 122027 16245655 ~ 16252193 (-)
LOC122352562 NA non-coding downstream 124471 16246653 ~ 16249749 (-)
LOC122352611 NA non-coding downstream 180680 16189534 ~ 16193540 (-)
G77936 NA non-coding downstream 194325 16178600 ~ 16179895 (-)
G78010 NA non-coding upstream 14663 16394214 ~ 16395645 (-)
LOC122353043 NA non-coding upstream 116426 16495977 ~ 16497273 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other downstream 197109 16172478 ~ 16177111 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other downstream 316913 16030527 ~ 16057307 (-)
LOC122352931 LOC107758671,LOC107689893 other downstream 352446 16016671 ~ 16021774 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 476988 15892644 ~ 15897232 (-)
G77702 NA other downstream 1015988 15357685 ~ 15358232 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 36357 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 52976 16432527 ~ 16437594 (-)

Expression


Co-expression Network