LOC122352830 (LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065)


Basic Information

Item Value
gene id LOC122352830
gene name LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16415908 ~ 16490354 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115417
atttttatatatatatatatatatatatatatatatatatatatatatatataaatgatatgatatgatatgattcaGAGCATGAATCACAAAAGAACCATTGTAGGTACAATGCTAAAGATAAAAACATTGGCTAAAAATGCATTGCGATCTGTACAAACAGGTTTAGTTTTGTTCTTCGGGTGACTTTGGTTTTCCCCACAGTTCTTCTTCGTTGAGgctaaattgttttaaatcagtaGTTCTTGATTATTGAATAAGGGGGGAAAAAACGAAGTAACTAAACGTTTAGAATAGCAAAATATCTCaattattaacatttgaaaTCTCTTTTGATATCGAGGTCAAATTTGTGTCCAAACCGGTTgttactgttaactaaaactattaaaaaaattttggtAACTGAAgtcacagcaaaaataaatataaaatgaatgacttaaaaactgaaacactgCCTTgacgaataaaataaaatacgtttGAAAAAGTAGTATActtctttaacaaaaaaataaataaaaaaaattcaatgccaaaaagaaataaaatatcaaaatttcaatattaatatttggtcaaaaattaCAACATAActgtattacaattaaatagaaaaaaaaaaattgaaatgttaataaataatataatagtatataaatatactaacCGAGACAGCAATCAATTCAATAGGTTTTATGATAAACCATTTGAAGTAAAATCAGCAGAgaacaactaaaactaaaagatttttcattgttttgagatgaaaatgaaaatgttctacTCATTTACTcagttgttccaaatctgtatgaatttctttgttctgctaaaCACACAGGAAGATATATTGAAAACAAATTATTGTAACCAGAGTGTtctggtcaccattgacttctatagtattttttgttGGGAGTCAAGGGTGACCCAAAACTTTTCTTCACAATaccttcctttgtgttcggcagaactaAGAACTCCAAACAGGTTTTGAGCTTCTCGAGGGTCAGTAAATGATGgaagagttttcatttttgggtgaactattcctttaaaagcacatttggtAAACAGTTTTCATCTAGACCGTGTCCTGTGTGAAGCCTGAACTCTTCCAAGTGCAGGACTTCAAGCACCGAGAACTTCAAAGCACGACCGATGAGATGTTGATCAGAAGCCAGCTGTGGAAAAAGCAGAAAGATTGGAGGATCTGTTCACTGCGCCTCACAGTTTCTCCATCTCTAAGGCTTCACCCTCGTCTCTTCAAATAACAGCAGAGGAgcctgaggaagaggaggatgaggaagatgaagagGGGTTTGAAGGGGAGGCCGGAAGATTCCACAGCACCCATTTACGCTTGTTTTGTCGTTTTTGGGACAGGTAGTCCTCCTTTTCCCGCTCTTTCCGAGCTCTCTGGTAGTGGTCGTCCTCCTTCAGGTACCAGACCGGAGGCCAGCGGTGCTTCTCAAAGTATTCTTGG
>XM_043250524.1
TGTGTGTAACTGTGCCTATTAATCACTGGTCAGTTCAAACAAATACGGGGGAAACCCACCTGCTGCATCTTCTTCacatatacataacaaaatgtTAAGCAGCGTGACTCGTTCTGAGGTTCCATGCTGCTTCTGGACGCTCGTGTAGTGGCCAGAAACGCGGTCTAGTTAGTGTGCAGGCAGCGCTAGGTGTTGAAACACAGCCGAGCGTCTCTCTCTGCTCGTCTCCGCTGGATCTCTTCAGTGCTCTGTGCTTCTTTGTTGCAGATGCGCAATCCTCCAGCGGCTCATGGGAACCCTCCGCGACCTCCAGTTTGCCCTGCAGACGAAGATTGAGGAGCTACGGCAACGTGACGCCCTCATCGATGAGCTGGAGCTGGAGCTGGACGCTAAAGATGACctcatcagacagctgcagggCGAGCTGGACCGTCTCCGCACCTCCTCGGCCTCACACCACCCCTCCGGGACCACAGAAGTCACAGATGAGCCCCTGCGCACTAAACGCCAGGCCATATCAGCCGAACCCACGGGGCTGGATCCCAATCAGCTCACCCACGTCACCCTCACCAACTACAGCAAGAGCGAGGAGTCTCGAGAGTTGATCCAGAAGGCTCTTTTGGAGAACGATTTCATGAAGCACCTGGAGGCCAGTCAGATCCTCACCATCATGGACTGCATGTATCCCACCACACTTGGACAGGGCTGCTGCGTCATCCAGGAGGGAGACGACGGCTCTACCGTATACGTTCTGGAAGAGGGGCTGGTGGAGGTTACCAAAGGAGGGCAGAAGCTGTGCACCATTGAGCCGGGGAAAGTGTTCGGGGAGCTGGCGATACTTTATAACTGCACACGCACAGCCACCGTCACGGCTCTGACTGATATCAAACTATGGGCTATAGATCGACAGGGATTTCAAACCATCATGATGAGAACTGGCCTCCTCAAGCATTCAAACTACATGGAGTTCTTGAGAAGCGTGCCTTCCTTCAAGACTCTCACTGAAGATGTGCTGAGTAAAGTAGCAGACGTTCTGGAAGAGACTCACTACAGTGATGGCGACTACATCATTCGTCAGGGCGCCACTGGAGACACGTTCTTCATCATCAGTGAGGGTCAGGTGAGGGTCACCCAGCAGAAATCAGCCAATGAGGAGCCAGTGTTCCTGTCCACACTGTCTCAAGGGGACTGGTTTGGAGAGCAGGCTCTTAAAGGGGAAGATGTACGTACAGCAAATGTAACGGCTGTTGGAGATGTGAAATGTCTGGTTGTGGACAGAGAGTCTTTCAAGCAGCTGATTGGAGGACTGGACAATATGAGCAACAAGATGTACGAGAGCGAAGAGGTGAAGGCCAGGTTGGAGGCAGAAGCTGCGTTCTTCTCTAGCATGTCTCTCAGTGACTTCCATGTGATCTGCACGCTGGGGGTGGGCGGCTTCAGTCGGGTGGAGCTGGTGCAGCTGAAGAATGATCACAGTCGATCCTTCGCCATGAAGGTCCTGAAAAAACGTCACATCCTGGACACGAGTCAACAGGGCCACATCCTGTCTGAGAGACGCATCATGATGGAAGCCCACAGTCCTTTCACTGTCAGGCTTTACCGGACGTTCAGAGATGTGAAGTACCTGTACATGCTGCTGGAGGTGTGTTTGGGTGGAGAGCTGTGGACTCTGCTCAGGGACAGAGGCTCGTTTGATGACGGCACCACGCGTTTCTACGCTGGATGTGTGGTGGAAGCTCTCGCTTTTCTACACTGCCATGGAATCATCTACAGAGACCTGAAGCCTGAGAACATCATACTGGACCACCGGGGATATGCCAAGCTGgtGGACTTTGGTTTCGCTAAAAAAGTTGGTTTGGGGAAGAAGACATGGACGTTTTGTGGAACCCCGGAGTACGTGGCCCCTGAGATCATCCTAAACAAGGGTCACGATGTCTCTGCTGACTACTGGTCTCTAGGAATCCTCATCTTTGAGCTGCTGAGCGGAAGCCCACCTTTCTCAGGGTCGGACCACATGAAGACGTACAACATTATTCTTCGAGGAATCGATATGGTGGAGTTTCCCAAGAAAATCCCCAAGAGCGCTGCAAACTTGATCAAAAGACTGTGCAGGGACAATCCATCCGAGAGACTCGGCAACCAGAAGAACGGTGTGAAGGACATCCAGAAACACAAATGGTTTGAGGGGTTTAACTGGGACGGTGTTCGTGAAGGAAACCTGACTCCTCCGTTTATACCAAATGTGGAAGGGCCTTTGGACACCAGTAATTTTGACTGCTTCCCCGAGGACACAGATGAGCCGCCTGACGAGGAGTCCGGCTGGGACTTTGACTTCTGATCACACATATTCAGTATGAAGACAGCTAAGACACAAGGAGCAGTACTGAATTAGCACAAAATCCAGACcctcacacaaaacacatttaaaatgacagcgCGCTCTCATCCTTCACTCGCCTCGGCATCCTTCCACCCCCGTGACCTTCTCTCTTCTGCGGAAAACAAAGGGTGTGTGTTTTTCAATATCCTCCACACAAAAAAGCCAGGTCTAGAGGGACACGAGGGTGAATAAACAATGACCAAATGTTCGCTTTTGCGTAAACTGCCTCCTTTATTCCCATGAAATTCAAGAAAGGTTCTTtgctaaatgtgtaaatgtttagCCGCTTGATTCGATACCCAAACTACACTGTAGTGAAAAATATAAGCTCGATGACCATCTAGTGCAGTGGTTTTCAGACTGGTTCCTGGGGACATTttacacacctgattcagatcatcagctcattagcaAAGAGCTCCGTGAACTCAAACGAGAAACATGCgaaatgtgcagagcagctggTCCCGAGGAACGGGCCTGAAAATCACTGATCTAGTGAGGATTCGACACGGAAAGACTCCGCCAGCAGAATCTCACCGTGACATTTCTAAATAACATGACTGGGCACAACTTTCCCATTTAATCTCAGCACTAGAGCCTAGTGATCACCTGATAGTCATGCCTGTTATAATCAGgaggatatatatatgtatatatatatatatatatatatatatatatatatatatatatataaaatgatatgatatgatatgattcaGAGCATGAATCACAAAAGAACCATTGTAGGTACAATGCTAAAGATAAAAACATTGGCTAAAAATGCATTGCGATCTGTACAAACAGGTTTAGTTTTGTTCTTCGGGTGACTTTGGTTTTCCCCACAGTTCTTCTTCGTTGAGgctaaattgttttaaatcagtaGTTCTTGATTATTGAATAAGGGGGGAAAAAACGAAGTAACTAAACGTTTAGAATAGCAAAATATCTCaattattaacatttgaaaTCTCTTTTGATATCGAGGTCAAATTTGTGTCCAAACCGGTTgttactgttaactaaaactattaaaaaaattttggtAACTGAAgtcacagcaaaaataaatataaaatgaatgacttaaaaactgaaacactgCCTTgacgaataaaataaaatacgtttG
>XM_043250525.1
TGTGTGTAACTGTGCCTATTAATCACTGGTCAGTTCAAACAAATACGGGGGAAACCCACCTGCTGCATCTTCTTCacatatacataacaaaatgtTAAGCAGCGTGACTCGTTCTGAGGTTCCATGCTGCTTCTGGACGCTCGTGTAGTGGCCAGAAACGCGGTCTAGTTAGTGTGCAGGCAGCGCTAGGTGTTGAAACACAGCCGAGCGTCTCTCTCTGCTCGTCTCCGCTGGATCTCTTCAGTGCTCTGTGCTTCTTTGTTGCAGATGCGCAATCCTCCAGCGGCTCATGGGAACCCTCCGCGACCTCCAGTTTGCCCTGCAGACGAAGATTGAGGAGCTACGGCAACGTGACGCCCTCATCGATGAGCTGGAGCTGGAGCTGGACGCTAAAGATGACctcatcagacagctgcagggCGAGCTGGACCGTCTCCGCACCTCCTCGGCCTCACACCACCCCTCCGGGACCACAGAAGTCACAGATGAGCCCCTGCGCACTAAACGCCAGGCCATATCAGCCGAACCCACGGGGCTGGATCCCAATCAGCTCACCCACGTCACCCTCACCAACTACAGCAAGAGCGAGGAGTCTCGAGAGTTGATCCAGAAGGCTCTTTTGGAGAACGATTTCATGAAGCACCTGGAGGCCAGTCAGATCCTCACCATCATGGACTGCATGTATCCCACCACACTTGGACAGGGCTGCTGCGTCATCCAGGAGGGAGACGACGGCTCTACCGTATACGTTCTGGAAGAGGGGCTGGTGGAGGTTACCAAAGGAGGGCAGAAGCTGTGCACCATTGAGCCGGGGAAAGTGTTCGGGGAGCTGGCGATACTTTATAACTGCACACGCACAGCCACCGTCACGGCTCTGACTGATATCAAACTATGGGCTATAGATCGACAGGGATTTCAAACCATCATGATGAGAACTGGCCTCCTCAAGCATTCAAACTACATGGAGTTCTTGAGAAGCGTGCCTTCCTTCAAGACTCTCACTGAAGATGTGCTGAGTAAAGTAGCAGACGTTCTGGAAGAGACTCACTACAGTGATGGCGACTACATCATTCGTCAGGGCGCCACTGGAGACACGTTCTTCATCATCAGTGAGGGTCAGGTGAGGGTCACCCAGCAGAAATCAGCCAATGAGGAGCCAGTGTTCCTGTCCACACTGTCTCAAGGGGACTGGTTTGGAGAGCAGGCTCTTAAAGGGGAAGATGTACGTACAGCAAATGTAACGGCTGTTGGAGATGTGAAATGTCTGGTTGTGGACAGAGAGTCTTTCAAGCAGCTGATTGGAGGACTGGACAATATGAGCAACAAGATGTACGAGAGCGAAGAGGTGAAGGCCAGGTTGGAGGCAGAAGCTGCGTTCTTCTCTAGCATGTCTCTCAGTGACTTCCATGTGATCTGCACGCTGGGGGTGGGCGGCTTCAGTCGGGTGGAGCTGCTGAAGAATGATCACAGTCGATCCTTCGCCATGAAGGTCCTGAAAAAACGTCACATCCTGGACACGAGTCAACAGGGCCACATCCTGTCTGAGAGACGCATCATGATGGAAGCCCACAGTCCTTTCACTGTCAGGCTTTACCGGACGTTCAGAGATGTGAAGTACCTGTACATGCTGCTGGAGGTGTGTTTGGGTGGAGAGCTGTGGACTCTGCTCAGGGACAGAGGCTCGTTTGATGACGGCACCACGCGTTTCTACGCTGGATGTGTGGTGGAAGCTCTCGCTTTTCTACACTGCCATGGAATCATCTACAGAGACCTGAAGCCTGAGAACATCATACTGGACCACCGGGGATATGCCAAGCTGgtGGACTTTGGTTTCGCTAAAAAAGTTGGTTTGGGGAAGAAGACATGGACGTTTTGTGGAACCCCGGAGTACGTGGCCCCTGAGATCATCCTAAACAAGGGTCACGATGTCTCTGCTGACTACTGGTCTCTAGGAATCCTCATCTTTGAGCTGCTGAGCGGAAGCCCACCTTTCTCAGGGTCGGACCACATGAAGACGTACAACATTATTCTTCGAGGAATCGATATGGTGGAGTTTCCCAAGAAAATCCCCAAGAGCGCTGCAAACTTGATCAAAAGACTGTGCAGGGACAATCCATCCGAGAGACTCGGCAACCAGAAGAACGGTGTGAAGGACATCCAGAAACACAAATGGTTTGAGGGGTTTAACTGGGACGGTGTTCGTGAAGGAAACCTGACTCCTCCGTTTATACCAAATGTGGAAGGGCCTTTGGACACCAGTAATTTTGACTGCTTCCCCGAGGACACAGATGAGCCGCCTGACGAGGAGTCCGGCTGGGACTTTGACTTCTGATCACACATATTCAGTATGAAGACAGCTAAGACACAAGGAGCAGTACTGAATTAGCACAAAATCCAGACcctcacacaaaacacatttaaaatgacagcgCGCTCTCATCCTTCACTCGCCTCGGCATCCTTCCACCCCCGTGACCTTCTCTCTTCTGCGGAAAACAAAGGGTGTGTGTTTTTCAATATCCTCCACACAAAAAAGCCAGGTCTAGAGGGACACGAGGGTGAATAAACAATGACCAAATGTTCGCTTTTGCGTAAACTGCCTCCTTTATTCCCATGAAATTCAAGAAAGGTTCTTtgctaaatgtgtaaatgtttagCCGCTTGATTCGATACCCAAACTACACTGTAGTGAAAAATATAAGCTCGATGACCATCTAGTGCAGTGGTTTTCAGACTGGTTCCTGGGGACATTttacacacctgattcagatcatcagctcattagcaAAGAGCTCCGTGAACTCAAACGAGAAACATGCgaaatgtgcagagcagctggTCCCGAGGAACGGGCCTGAAAATCACTGATCTAGTGAGGATTCGACACGGAAAGACTCCGCCAGCAGAATCTCACCGTGACATTTCTAAATAACATGACTGGGCACAACTTTCCCATTTAATCTCAGCACTAGAGCCTAGTGATCACCTGATAGTCATGCCTGTTATAATCAGgaggatatatatatgtatatatatatatatatatatatatatatatatatatatatatataaaatgatatgatatgatatgattcaGAGCATGAATCACAAAAGAACCATTGTAGGTACAATGCTAAAGATAAAAACATTGGCTAAAAATGCATTGCGATCTGTACAAACAGGTTTAGTTTTGTTCTTCGGGTGACTTTGGTTTTCCCCACAGTTCTTCTTCGTTGAGgctaaattgttttaaatcagtaGTTCTTGATTATTGAATAAGGGGGGAAAAAACGAAGTAACTAAACGTTTAGAATAGCAAAATATCTCaattattaacatttgaaaTCTCTTTTGATATCGAGGTCAAATTTGTGTCCAAACCGGTTgttactgttaactaaaactattaaaaaaattttggtAACTGAAgtcacagcaaaaataaatataaaatgaatgacttaaaaactgaaacactgCCTTgacgaataaaataaaatacgtttG

Function

NR:

description
PREDICTED: cGMP-dependent protein kinase 1-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG:

id description
K07376 PRKG1; cGMP-dependent protein kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU115417 False 1492 lncRNA 0.34 2 16415908 16490354
XM_043250524.1 True 3515 mRNA 0.48 21 16416912 16431462
XM_043250525.1 False 3509 mRNA 0.48 21 16416912 16431462

Neighbor

gene id symbol gene type direction distance location
stc1l stc1l,LOC107689312,LOC107718700,LOC107588987,LOC107658607,LOC107758648,LOC107602071 coding downstream 14374 16398853 ~ 16401534 (-)
march5l march5l,LOC107718703,LOC107689266,LOC107602066,LOC107658605,LOC107588990 coding downstream 70085 16342029 ~ 16345823 (-)
tcf7l1a tcf7l1a,LOC107602061,LOC107558109,LOC107658535,LOC105912913 coding downstream 132148 16256279 ~ 16283760 (-)
dusp11 dusp11,LOC107602062,LOC107758654,LOC107689237,LOC107558079,LOC107565330 coding downstream 171875 16240176 ~ 16244033 (-)
stambpa stambpa,LOC107758608,LOC107658597,LOC107558102,LOC107746197,LOC107689905,LOC107602045 coding downstream 176839 16232746 ~ 16239069 (-)
G78010 NA non-coding downstream 20263 16394214 ~ 16395645 (-)
G77980 NA non-coding downstream 36357 16374220 ~ 16379551 (-)
G77979 NA non-coding downstream 62860 16351397 ~ 16353048 (-)
G77947 LOC107689250,LOC107689777,LOC107602036,LOC107758655,LOC107602063,LOC107758576 non-coding downstream 163715 16245655 ~ 16252193 (-)
LOC122352562 NA non-coding downstream 166159 16246653 ~ 16249749 (-)
LOC122353043 NA non-coding upstream 5623 16495977 ~ 16497273 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other downstream 238797 16172478 ~ 16177111 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other downstream 358601 16030527 ~ 16057307 (-)
LOC122352931 LOC107758671,LOC107689893 other downstream 394134 16016671 ~ 16021774 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 518676 15892644 ~ 15897232 (-)
G77702 NA other downstream 1057676 15357685 ~ 15358232 (-)

Expression


Co-expression Network