umodl1 (LOC107686212,LOC107728833,LOC107589724)


Basic Information

Item Value
gene id umodl1
gene name LOC107686212,LOC107728833,LOC107589724
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 12807284 ~ 12817597 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249841.1
ATTTAGCAAATCAAAATGCATTGGGTTGTTGGTATTTGGTTAATTGTGTCTCTTCTCGGCCTTGGAATGGGGCacaacactttatttgaagGATATGACCGGACTCTATCAGGTTATCATCTGTGTAATATGACTGAGTCCGTGTCAGAGACCCATGTGGTCCCCTACACAACCTCGTACACCCAGAGGAAACCATGTGGTGGCTGGCTGCCATGGGCAATGTGTGATGTCACAGTTTATAAGACAGAATACCGAACACAGGTGTATGACATGCCCAAACAGGTCATGAAATGTTGCCGTGGCTATGAACAAGTTGGGAGTTACTGTGCCTTATCCttgaacagaagtgcagaattcACATCCAAGCCAGGACTGTGTCCCCCACCAAGAGAGAGAGGGTCTCGGTGTAATAATTCAGACTCCTCTGGCTCTGTGTGCAACCGGGACATTGATTGTCCTCAGTGGCAGAAATGCTGCCTAATCGAAAACACCTCCCCCATCTCTCAGTGCTTAGATCCAGTACCATCAGtCAACAGAACCTGGTGCTTCAATGTGACAATAACAGTTAAGACGACCTATGAGCTAGTTACCAGGGACAAAGGCCTCTTCAACCACACCAGACTGCTGCACTCTGTGGTAACCGGTGCTCTGGGAACTGATCAGATTTCTGTCCATCACATCTGGTCAAAATCAGCAGGACCCTTCACAACCTCTTCCTCACTGCTGGTTTGTTCTCCTAAAGCCATCTTACTGGcagacatttctgcaaaactgtaTCTGCTGGGAATCATTGAGGAGGTGACTAATGTGGTGGTGCAAGATGTGGATGAATGTGTTCCACAGTTGAACAGTTGTTCTCCACATGCAAGCTGCAGGAATACAGAAGGCTCTTATACATGCACCTGCCTTCCAGGCTATCAGGACCTCAACCTTTCACAACCAGGAACAGTTTGCACAGTTTCCAGTGCCACTGCACAACCTACACCACCAACCACCACCTCCATCACTACTCACTCTCCACCAGATAATAAAACTGATAGAGGACAAACGAGTCCCTCCTCGGCATCCACTGTTGAAACTTCTTCCTTCAGCCAAACTTTTTCTACATGTGGAGTGGCATATCAAGATCAAGACCActctaaaatgtgtaattttatcacACAGCACAATGCCACAGATGTTGCAAGTTTTGAGGAAGTGGGCAATTGGTGTTTCAGAGAATTTGGCAGTACATTCGACCGGCCTCACTACTGTAGACCACGTGTAACCATACCAGCCACATCAGCATCTTCACCTCCAGACTACACCCCCGTGATCATCAGCATCCTCTCTTATAATGTCACTGCATCATCCTTCCATGTGGCATGGACCACTGACATCCAAACCGGCGTCACCTTCGACCTGATTCTGCTAAACGGGAGcaaagaaatacaaaacttcGTAGTGAAAAGCTATAATTTAACATTCACAGACCTGAGTCCTGCTGTTCTTCATACTCTTCGTGTCACTCCAGTTGCCTGTGGTAAACAGGGAAACCCCACAGAGATCAAAGTGAGAACAGATGGTCTGTCTCTTGGAGCTTCAGCCCGTTTGAAAGGTGTAAATTATACAGAGGCCATGAAAGACCCAAACAGTGATGAATATAAGAAGTTCTGCAACAGTGTCATAAATGAGATTCTCTCATCCTTGCCTTCAAAGATCCATGCACTAGTCGTCTCTGGACAGGTCATCATCCAGATAACATCCCTCTCATCCGGCAGCGTAATCGTCAACTTTTCCATCATATTTCAACCCGGCAGCAGCATGAACATCTTAAGCGTGTCCAGTGCTCTGATGGGGTCTCTTCAGAACAGTTCCACATATGTAGTAGACGGTAACAGCATATACATAACAGATGCAGATGAGTGTTTCCTGGATAAGGCGGACTGCTCTCCGTGGGCCTACTGTAATAACACTTTTGGCTCATACACCTGTGTCTGTTGGTCTGGATACACAGACTTGAACCCCAGTAGACCAGGACGCAGCTGTGCAGCAATAATCCATCCCACTACAAACCACCCTGGAGTACCCTCTGATTCCACAGGCCCTACATCTTCCACCACCATCTTTGGAAACTCAACTATGAGCAGTACAGTGAGCACAACTCACGTCCAGCACAacacaacaacattttcaacttCCACAGCTGCTAATGGACCAAGAACAGTGATGCCGAACGCTCCTACAACAACACTTTCACCTATGAAACAAAACTCTCTCAAAACTACAACTTTCGGTTACCAGACATTAAACAGTCCACCACATTTCCTCCCCTACGTAGCTGTTGAGTGCATCCCAGGTTTTCTAACAGTTGTTGTACGGCGAGACTTCTTGCACAACTATAACATCCAAGAGAGTTCCCTGTACCTCGGTACACCAGAATGTGGTCTCAGCAGGGAAAATGCAACCCATGTGTGGCTCACTACATCTTGGGATACGTGTGGTACTAAACTAGCTCATaacAACACCCATAATTTAGCTAATGTGACTCTATATAACAGTGTGAGCAATGTTTTTACCGTGCGTCTGGAAGTTCCTGTCATTTGCTCCTACCCCAGAGGTGTCCTCATCTCCACGGGATACGCCCCCTCAGGGTATGTAGATATGATAAATTACCCAGTGGCAGGATCGGGTAGTTTCCAGGTTACTGTGCGACTGATGAATGGGACGATTCCTTTACCTGCCGATTACAGCCTCTCTCCTGATGACGAAATCACCGTCGAGGTTGGGGTCAACACTACTATCTCCCAAATCAAAGTTGTCATTGAAAAGTGCTGGGCCACTTCCAGCAGCGACTCATCAGAGTACCCCTACTATCTGTTTCAGGAACAAGGGTGTCTGGTGACAAACCCATATACAACCGTTCGTCAGAATGGAAATGACACTGTGGCTTTGATATCAGTGCGCATATTCAAAGTTGTAAATCTCTACACCATCTACCTGCACTGCCAGATCCAGATCTGTGTTGAAGTTCAGGACGGCACCTGCAAACCTTCTTGTATGAGGACATTCAGGTCTTCTAACATAGCCGGAGTGAAACAGGCTACCGTTGGACCCATAAAGAGAATACCTTCAAGTAAATTCTTCTCAGATACATCGAGTACTCTGCAGACTGTTGGATTTATTCTGCTGGGTGTTGGGGTGTTTGTGTTTTCCCTGGCTGCCGTCGCAGGACTGGCGTATCATAAAAGGAAAATCGGCAACTACAATTTCCGATGTAAACCACAGCAGCAGAACTTCACTTATCATGTTTTTGACACCTAACTGCAGTCAAATAGTTAACTGTAGCTTTAAACtggtcattttattattagattttactAATTGGCCCAGTATagagaaaattaagaaatgttttagaGAAATGGATTtgactatattttttttaaaagaacgtttttttttttttttttatcagcactTCAAGATACATACAGGGTGTATATAAAGGCCTTAAGCATGTCTTTTACGCTGTTGGGAGGGGTTgccatttttaagaaatcataTTTTCGTTTTAAAATCTGCACACATTCCTGTTTGTAGTCATATTCCTTGCCAGTCATATTCATGCATACAAGATTTCACGAATTTGCATAAACTGGATGTAATTGTTGATCGTTTGACTCTTCTTTTAAAACcgttatgaaatattaaaaaaataagcggCTTACATCTTACCTTGGAttgtttcac

Function

NR:

description
PREDICTED: uromodulin-like 1

GO: NA

KEGG:

id description
K24499 UMODL1; uromodulin-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249841.1 True 3732 mRNA 0.45 20 12807284 12817597

Neighbor

gene id symbol gene type direction distance location
dgat2 dgat2,LOC107746984 coding downstream 27495 12771426 ~ 12779789 (-)
vps26bl v26bl,LOC107588734,LOC107751386,LOC107691644,LOC108423787,LOC105024202 coding downstream 297376 12505012 ~ 12509908 (-)
fez1 fez1,LOC107691643,LOC107751387 coding downstream 306435 12491670 ~ 12500849 (-)
robo3 robo3,LOC107577175,LOC107751391,LOC107589390 coding downstream 376405 12311190 ~ 12430879 (-)
LOC122352422 pknox2,LOC107686111,LOC107691639,LOC107747045,LOC107686209,LOC107751409 coding downstream 523697 12217090 ~ 12283587 (-)
atg101 atg101,LOC107751375,LOC107686213,LOC107589731,LOC107691654,LOC107577413 coding upstream 9325 12826922 ~ 12828717 (-)
trim37 trim37,LOC107686133,LOC107577452,LOC107691657,LOC107589414,LOC107728810 coding upstream 66603 12884200 ~ 12900007 (-)
rabgef1 rabgef1,LOC107734461,LOC107577469,LOC107728875 coding upstream 83455 12901052 ~ 12908439 (-)
kctd7 kctd7,LOC107588867,LOC107686134,LOC107734471,LOC107577526,LOC107691660 coding upstream 90974 12908571 ~ 12912532 (-)
cux1a cux1a,LOC107728840,LOC107588830,LOC107734438,LOC107691661,LOC107686135,LOC107577496 coding upstream 97586 12915183 ~ 13028810 (-)
G76912 NA non-coding downstream 128659 12678367 ~ 12678625 (-)
G76902 LOC107746985,LOC107751382 non-coding downstream 197186 12605219 ~ 12610098 (-)
LOC122353234 NA non-coding downstream 353633 12448542 ~ 12453651 (-)
G76755 hspa8,LOC100305036,LOC101075813,LOC105019107,LOC107662768,LOC107693988 non-coding downstream 1041074 11701871 ~ 11766210 (-)
G76693 NA non-coding downstream 1320856 11485906 ~ 11486428 (-)
G77153 NA non-coding upstream 204056 13021653 ~ 13103059 (-)
G77157 NA non-coding upstream 216144 13033741 ~ 13035585 (-)
G77208 NA non-coding upstream 393019 13210616 ~ 13210946 (-)
G77220 kl,LOC107577734,LOC107589796,LOC107728890 non-coding upstream 495597 13313194 ~ 13315574 (-)
G77245 NA non-coding upstream 511045 13328642 ~ 13328893 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 18189 12782353 ~ 12789095 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other downstream 37867 12678990 ~ 12769417 (-)
ccdc83 NA other downstream 1222324 11505310 ~ 11584960 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 1600032 11176569 ~ 11207252 (-)
G76625 NA other downstream 1768553 11017110 ~ 11038731 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 674676 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 720559 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 825587 13643184 ~ 13654413 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other upstream 988507 13806104 ~ 13807819 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 1384665 14202262 ~ 14204127 (-)

Expression


Co-expression Network