LOC122352430 (LOC107743476,LOC107578847,LOC107743445,LOC107589561,LOC107583406,LOC107697382)


Basic Information

Item Value
gene id LOC122352430
gene name LOC107743476,LOC107578847,LOC107743445,LOC107589561,LOC107583406,LOC107697382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14022835 ~ 14023833 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249846.1
ATGAGCTCCATGCAGTCAGACTCCTCTGCAAATGTGACTTTTGTTCGTCCTGCTACATTTTATCTCAATGGCTTTTTTAATATTCCACTTGCAAAATACTACTATGTGTTCTTGTCTTTAGTATAtgttgttactgttttggggaattcatttattatgtgtatcaTATATTTGGTGCGTAGGCTCCACACAGCCAAATACATTGCTGTTTTTCATCTGGCTCTTTCTGATCTGTGTGGAAGCTCAGCTTTGATTCCAAAAATCAtggacacatttttatttgagcacCAGGACATTTTATATGAAGCATGTTTggcaaatatgttttatgtatttcatttcatgaaTCTGCAGTCTTTTTCATTAATTGTCCTGGCTTACGATAGATTGGTAGCTATTTGTTTTCCTCTGCGGTATCATGCCATTGTAACCAAACCAGCCATGCTTCTGATTCTAGGATTGATGTGGattttttctgtgattttcttttctgtacttGTAGGTTTGGTGAATAGAATTTCTTTTTGTAAATCTAATGTAATTGATACTTATTACTGTGATTTTGCCCCTATTTATAGGCTAGCTTGTAATGATAATTCTGTCCATATTTTAATGGGGAAAATTTGTTTTGGGCTCCTAATGTGCATGCCTCCAATACTGATcttcatttcatatttctgtaTTGCCCTGGCTCTGCTTAAGATTTCTCATGGTGTTGACCGGATCAAAGCCATGAAAACTTGCACCTCTCATCTCATGTTGGTGGCAATTTTTTATCTACCAATTTTAAGCAATAATTTTGCATCTATGATAACACCTCTACATCCAAATGTCCGTATAATTAACAGTTCCCTGACACAAACAATGCCACCTATGCTGAATCCCATCATATACACTCTAAAGACCGAGGAGGTCATGCAATCCATAAAAGAACTGTACAAACGCAGCAGGGTGCATGCTACGATAGCAAGACATTATGAAATACAGTGGCAGAAATGA

Function

NR:

description
PREDICTED: olfactory receptor 1468-like, partial

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249846.1 True 999 mRNA 0.37 1 14022835 14023833

Neighbor

gene id symbol gene type direction distance location
LOC122352429 LOC107578824,LOC107743443,LOC107697381,LOC107686201,LOC107743445,LOC107697382 coding downstream 5197 14016637 ~ 14017638 (-)
LOC122352428 LOC107686199 coding downstream 7854 14011544 ~ 14014981 (-)
smg6 LOC107728864,LOC107589291,LOC107686181,LOC107578000,LOC107697428,LOC107743389 coding downstream 236173 13773844 ~ 13786662 (-)
si:ch211-244c8.4 si:ch211-244c8.4,LOC107728884,LOC107686180,LOC107743390,LOC107697427,LOC107577989 coding downstream 264576 13754169 ~ 13758259 (-)
gabrr3a gabrr3a,gabrr3,LOC107589257,LOC107697425,LOC107686176,LOC106563567,LOC106603079 coding downstream 312387 13699234 ~ 13710448 (-)
LOC122353045 LOC107697402,LOC107743478,LOC107589583,LOC107583407,LOC107579166,LOC107686204,LOC107741179,LOC107743480 coding upstream 2852 14026685 ~ 14027683 (-)
LOC122352431 LOC107589561,LOC107583406,LOC107741179,LOC107589922,LOC107579158,LOC107686204,LOC107589583 coding upstream 6318 14030151 ~ 14031155 (-)
LOC122352432 LOC107741179,LOC107686204,LOC107589583,LOC107583407,LOC107579158,LOC107743479,LOC107743480,LOC107697403 coding upstream 11502 14035335 ~ 14036324 (-)
LOC122352433 LOC107741179,LOC107686204,LOC107589583,LOC107583407,LOC107579158,LOC107743479,LOC107583406,LOC107589561 coding upstream 19854 14043687 ~ 14046052 (-)
LOC122353030 LOC107583407,LOC107579158,LOC107686204,LOC107743479,LOC107589583,LOC107741179,LOC107697403 coding upstream 29223 14053056 ~ 14054080 (-)
G77379 NA non-coding downstream 28068 13994422 ~ 13994767 (-)
G77378 NA non-coding downstream 35669 13986935 ~ 13987166 (-)
G77352 NA non-coding downstream 217506 13805089 ~ 13805329 (-)
G77351 NA non-coding downstream 217943 13804483 ~ 13804892 (-)
G77347 NA non-coding downstream 221923 13800013 ~ 13800912 (-)
G77390 NA non-coding upstream 35606 14059439 ~ 14097135 (-)
G77432 LOC107744607,LOC107691628,LOC107693969,LOC107747009 non-coding upstream 121058 14144891 ~ 14145304 (-)
G77456 NA non-coding upstream 268020 14291853 ~ 14292718 (-)
G77472 NA non-coding upstream 337521 14361354 ~ 14361734 (-)
G77476 NA non-coding upstream 342448 14366281 ~ 14368555 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other downstream 215016 13806104 ~ 13807819 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other downstream 368422 13643184 ~ 13654413 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other downstream 479220 13538156 ~ 13543615 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other downstream 489771 13492273 ~ 13533064 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 1233740 12782353 ~ 12789095 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 178429 14202262 ~ 14204127 (-)
G77441 dlg1l,LOC107653521,LOC107705307,LOC107660320 other upstream 180583 14204416 ~ 14208006 (-)
G77443 NA other upstream 210673 14234506 ~ 14264322 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other upstream 316213 14340046 ~ 14343012 (-)
LOC122353009 LOC107562038,LOC107562041 other upstream 443353 14467186 ~ 14481449 (-)

Expression


Co-expression Network