LOC122352451 (LOC106676183,LOC106674878)


Basic Information

Item Value
gene id LOC122352451
gene name LOC106676183,LOC106674878
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15305535 ~ 15306408 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249858.1
ATGAAACAGGTGTACTGCGTCCCTTTCGAACGAAACTCTGACAGAGTGAAAAACCAACGAGTGGAATATGTTCAGagaATGTTTGAGATTGAAGGACGGCCTGTTCCCCATGAAATTATCTTTGTGGATGAGGCAGGTTTTAACCTGACCAAAAGGAGGAGAAGAGGGAGGAACAGAATTGGTCATCGGGCTATTGTAAATGTCCCTGGTCAGCGTGGAGGGAATGTCACTATGTGCGCAGCCATCAGCCAACGAGGGGTACTCCACCGCCATGCCATTCTAGGACCCTATAATACTATGCTCCTCCTTGCTTTCCTTGATGGTCTAAGAGAGCATATGTTCCAGCTGGACTACAGGGAACCAGCACAGCCAGAGCAGCCTCACTACGTTGTTGTTTGGGATAATGTCAGCTTCCATCATGCTGTTCTGGTTTGTGACTGGTTTACCAATAACCCAAGGTTTTCTAACATCTTTCTGCCTGCATACTCTCCCTTTCTAAACCCGATAGAGGAGTTTTTTTCGGCATGGCGGTGGAAAGTGTATGACAGAGAGCCTTATGTCCGTGTTCACCTCCTCCAGGCCATGGAAGAAGCCTGCCTAGACATAACAGTAGATGCATGCCAGGGGTGGATCAGGCATGCAAGAGGATTTTACCCCCGCTGCCTGGCTAGGGCCAATATAGCCTGTGACGTAGATGAGATTCTCTGGCCTGACCCAGACCAAAGACGGGATGCTGAGGTGGAAtaa

Function

NR:

description
uncharacterized protein LOC106676183

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249858.1 True 747 mRNA 0.49 2 15305535 15306408

Neighbor

gene id symbol gene type direction distance location
LOC122352450 NA coding downstream 190087 15111412 ~ 15115448 (-)
si:ch211-256e16.3 si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741 coding downstream 676461 14620986 ~ 14629074 (-)
LOC122352591 uqcrc2a,LOC107671252,LOC107717493,LOC107552131,LOC107674831 coding downstream 686925 14611801 ~ 14618610 (-)
mosmoa c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding downstream 694312 14591019 ~ 14611223 (-)
sdr42e2 sdr42e2,LOC107726803,LOC107654653,LOC107717482,LOC107552104,LOC106592406 coding downstream 737342 14554997 ~ 14568193 (-)
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding upstream 1491 15307899 ~ 15315868 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding upstream 10240 15316648 ~ 15341965 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding upstream 41059 15347467 ~ 15362276 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding upstream 376863 15683271 ~ 15684293 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding upstream 389012 15695420 ~ 15697678 (-)
G77692 NA non-coding downstream 29531 15273913 ~ 15276004 (-)
G77676 NA non-coding downstream 145688 15159465 ~ 15159847 (-)
G77674 NA non-coding downstream 148944 15156349 ~ 15156591 (-)
G77672 NA non-coding downstream 166528 15138607 ~ 15139007 (-)
G77669 NA non-coding downstream 201966 15102149 ~ 15103569 (-)
G77700 NA non-coding upstream 38592 15345000 ~ 15347289 (-)
G77703 NA non-coding upstream 61993 15368401 ~ 15368676 (-)
G77706 NA non-coding upstream 85680 15392088 ~ 15394552 (-)
G77715 NA non-coding upstream 337995 15644403 ~ 15647863 (-)
LOC122352661 NA non-coding upstream 520676 15827084 ~ 15827556 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 15863 15229969 ~ 15289672 (-)
G77671 NA other downstream 197783 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 715636 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 820243 14484799 ~ 14485292 (-)
LOC122353009 LOC107562038,LOC107562041 other downstream 824086 14467186 ~ 14481449 (-)
G77702 NA other upstream 51277 15357685 ~ 15358232 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 586236 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 710263 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 724119 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 866070 16172478 ~ 16177111 (-)

Expression


Co-expression Network