LOC122352458


Basic Information

Item Value
gene id LOC122352458
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15705225 ~ 15706280 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249866.1
ATGAAAGGACAGACAGAAGAGCAAAGCAGACTCATAACAGGAGGAGACTCACTCATGGCCTATGAGACAGGCCTATGCTTTCCTGCCATCAACTCTTCATGTATGAAAGGCAAACGCTCCAGACATGAATATAATatcatgtatgtgtttttttcattgctgtcagcatggactgtgtttctgaatctgctggtgatcatctccatctctcacttcaAGAAGCTTCACACTCCAACCAACCTgatcattctctctctggctgtggCCGACATACTTACTGGACTTATTGTTATGCCTTTGGAGGCCATTAAACTGATTGAGACGTGCTGGTACTTTGGCAATACTGCCTGTGGACTGTTTACTATTACCCTTGGTGTGATTATTTCAGCATCTCTTAGTAATTtggttttaattgctgttgatCGTTATGTGGCTTTGTGTCACCCTTTACGGTATCCacagaaaataaccaaaaccaAAACCTTAATGACCATCTGTCTCTGCTGGTTTTGCTCTTCAGCTTATATAAGTGCCCTTTTTTGCAGCAACAGACGTTCTGACTCTTCAGACAAAATAGATGTGTGTTATGGAGAGTGTTCTTTCATGATGAGTTTTACATGCACAGTCATTGATCTGTTTGTGTCCATGCTTCTTCCTTCTACCCTGATCATAGCTTTATATTTGAAGATATTTCATGTTGTACATCAGCAAGTAAAAGTTATAAACTCTCTGAGGAAGGGCGGTAAACGTGTAAGGGAGGATTTGGTGGGGAGAAAATCGGAGAGAAAAGCTGCTTTCACATTAGGAATCATTGTAGCAATTCATCTTCTCTGTTGGTTACctctctatattttttttctggcagGGAATACAATGATGTCTTCTGTAATAGTGAATTTTCTAAGATGGGTCTACTATATTAACTCAGGCCTAAATCCTCTTATCTATGCTTTATTTTACCCTTGGTTTAGAAAATCAGTTACATGCATTCTATCACTGAAAATAGTTCAACCAGCATCTTCTCTGGTggacattttttcaaattattactcataa

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249866.1 True 1056 mRNA 0.39 1 15705225 15706280

Neighbor

gene id symbol gene type direction distance location
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding downstream 7547 15695420 ~ 15697678 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding downstream 20932 15683271 ~ 15684293 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding downstream 342949 15347467 ~ 15362276 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding downstream 363260 15316648 ~ 15341965 (-)
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding downstream 389357 15307899 ~ 15315868 (-)
LOC122353072 NA coding upstream 7101 15713381 ~ 15714427 (-)
LOC122353050 NA coding upstream 10504 15716784 ~ 15717845 (-)
LOC122353087 NA coding upstream 15075 15721355 ~ 15722425 (-)
LOC122353079 NA coding upstream 24255 15730535 ~ 15731590 (-)
LOC122352466 LOC107658525,LOC107730956,LOC107558095 coding upstream 61656 15767936 ~ 15768934 (-)
G77715 NA non-coding downstream 57362 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 310673 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 336549 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 357936 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 429221 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 120804 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 124927 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 133233 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 134071 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 196607 15902887 ~ 15912782 (-)
G77702 NA other downstream 346993 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 415553 15229969 ~ 15289672 (-)
G77671 NA other downstream 597473 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1115326 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1219933 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 186364 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 310391 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 324247 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 466198 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 709628 16415908 ~ 16490354 (-)

Expression


Co-expression Network