LOC122352466 (LOC107658525,LOC107730956,LOC107558095)


Basic Information

Item Value
gene id LOC122352466
gene name LOC107658525,LOC107730956,LOC107558095
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15767936 ~ 15768934 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249870.1
atgttgaaCAGGTGAATGGCGGACCAAGACAAGCAAGTAATCGAGTATTGCTTTTCAAGCAATAACTTGTCGTGCATCAAGAATATCAAACCTCAAGcagagtacatttttttatatatttttatttcttcatcatcTGTTCtcactgtgtttctgaatctgctggtgatcatctccatctctcacttcaAGCAGCTGCACACTCCAACCAACCTACTTattctctctctggctgtggCCGACCTGCTTGTGGGACTGATTGTTATACCACTGATGGGAATAAGATATATTGAGACGTGTTGGTACTTTGGAGAGACATTTTGCTCTTTGTTTCCATTTATCCTTTATACGGTTGTTTCAGCATCTCTtggtaatttagtttttatatctATAGATCGTTACATTGCTGTGAAAGATCCTCTGCAATATTCAACAAAGGTCACAACCAGCAAAGCtgttttttgtatcattttaaacTGGCTATGTTCAAGCATATATTCAGTTATCATGTTATACGATGCTATCTTTAATACAAGGAACCCAATTACATGTTACGGGTACTGTATTGTTACTGTCAAGTATGAGTATGTTCTCACAGACCTCATCGTTTCATTAGTTACCCCTTGTTCAGTAATCATATCTTTATACGGGCAGATCTTCTGTGTAGCAAAACATCAAGCTCGGCTTATAAACTCTGTCACAAATGTCAGCAAGTCAGAAAAAAAGGCAGCAAAAACACTGGGGATTGTGATAGCAGTTTATCTTCTGTGTTGGATACCTTATTACattgtctctctttttcctgGATATGATTCAGATGAATCAGTCGTCATAAATATTATGAGTTGGATTATGTATATGAATTCTTGCATGAATCCTCTTATCTATGCATTATTTTATCGATGGTTTAGAATATCAGCTAAACACATTCTGtctctaaaaatatttgaaccatCCTCAGAATATTTAAGTCTGTTCGCAGAGGTAACTGATCAGTAA

Function

NR:

description
PREDICTED: trace amine-associated receptor 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249870.1 True 999 mRNA 0.36 1 15767936 15768934

Neighbor

gene id symbol gene type direction distance location
LOC122353079 NA coding downstream 36346 15730535 ~ 15731590 (-)
LOC122353087 NA coding downstream 45511 15721355 ~ 15722425 (-)
LOC122353050 NA coding downstream 50091 15716784 ~ 15717845 (-)
LOC122353072 NA coding downstream 53509 15713381 ~ 15714427 (-)
LOC122352458 NA coding downstream 61656 15705225 ~ 15706280 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding upstream 4953 15773887 ~ 15774873 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding upstream 27610 15796544 ~ 15797536 (-)
LOC122353177 LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107558078,LOC107658550,LOC103911781 coding upstream 30856 15799790 ~ 15800764 (-)
LOC122353102 LOC107558094,LOC107658523,LOC107730955,LOC107558078,LOC107558105,LOC107658550,LOC103911781 coding upstream 36173 15805107 ~ 15809057 (-)
LOC122353239 taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088 coding upstream 52058 15820992 ~ 15821987 (-)
G77715 NA non-coding downstream 120073 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 373384 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 399260 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 420647 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 491932 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 58150 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 62273 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 70579 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 71417 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 133953 15902887 ~ 15912782 (-)
G77702 NA other downstream 409704 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 478264 15229969 ~ 15289672 (-)
G77671 NA other downstream 660184 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1178037 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1282644 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 123710 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 247737 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 261593 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 403544 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 646974 16415908 ~ 16490354 (-)

Expression


Co-expression Network