fgf11b (fgf11b,LOC107677987,LOC107586150,LOC107720691,LOC107676016,LOC103026543,LOC108443340)


Basic Information

Item Value
gene id fgf11b
gene name fgf11b,LOC107677987,LOC107586150,LOC107720691,LOC107676016,LOC103026543,LOC108443340
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7549993 ~ 7588859 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249877.1
CTgcgtgtgcgagtgtgtgaaTTTGGCAGTGATAACTGACTCGGAACGCACGACTGCGATGTTCTTCCCGAGGTGACTGAAAACTGTCACCACTGGCACCTAAagcgctctctctcgctctcactctctctctcctccactCTACCCATCAAGGACAGACACGGCAGAGTGAAGGAAGAACAGTGGCGTTAACTCTCTCTCAccctcctctttttctctcccttcatctttctgttttctcttctccATTGTTCTCATTCATCATTCTTGTTCTTCTCCCACACTCTTTTACGCTCACTCGCTCTCTTTCCCTCACTCGATTGTGCTcgctctccctccctccctcactTGTTCTCTCATGAATGTCACCTTTACTGGTGGTAGCCGCTGGATTTGcgcacacacccacatacacacacgcttGCTGGCTTTGGGGTGGGGGGGTAATGTAGGGCTGTGGGGAGAGATAGCGCATGCCAGAAGAGGCAGAAGAGAAATTTCTCGGAGTCCATTCTTCTTTTGCCGGCTCCCGTCCTGCGACTCAGGGCTTTGTCCGTCCCAGCAGCTGAAGCAGAAGTGCCTCTGGACGTGGGAGCGCTGGATTACCGCtccagattattattttttttttccacagcacAACTAAAGTTAGCCATAGGGACTGCAGGCTGACCATCTGCCCGTTTCTGACAGGATCTGTTTCTGATTTGAGTCGAATAATTCTGCTGCCAGTGAGTGAAGAACTTTCCACGAGGACCAGCCATGTGTGGGTGAGAAAGCTCTTCGTTTCCGTGTGCTAAACTTTAGCtttgtcagtgtttttgtcttCAGGAACAAGACACAAGGGGAGGGGAAGGGAGAAGAGAGGAGGGGGGGGCAAATATGTCGGCAATGTCGCAACGATGACTTTGTCAGCCTCTTTCAGTATCTTTTTGTGGAAATGTGACTGCGTCAATTTACGTTTTTTACGGATTTGTTGTGGTGTCAATATGTATTTAGCGAAACAAACATAATGAAGGACAAACCATGGACAGGTTGTGAGTGGACCAGAACTTAACCTCTTCCCTTACTGGAGggaaacacacagacacgtgAGGAACCTACCTGAATACTTGGCTCGTCGCGCGAGGTTTGACCCTTGACTTTTATCTCTTTGTGCTGCTGGTAAAAAGACAAGTGCATCCAGAGAGGGTCTCTTAAGCAAACAGAGACCCCCCTCCCAAAGGTGAGAGGGGGGGGAAGATGGCAGCTCTTGCCAGTTCTCTCATCAGACAAAAACGGGCAGTCAAGGACGACCAAGCCAACCGGCCAATAGCCAACAAACGCAAGCCGTGCCCCAAGAGCAACAAGTCTCTTTGCCAGAAACAAATTCTTGTTCTCATATCAAAAGTACGATTATGTGGCGGCCGAAGAGGAAGAACAGACAAAAGACCAGAGCCGCAGCTAAAAGGCATCGTCACCCGTCTGTACAGCCAGCACGGCTACTACCTGCAGATGCTGCCGGATGGCACCATGGACGGCACAAGGGACGAGAACAGCTGCTTCTCACAGTTCAACTTGATTCCTGTGGGTCTGCGGATAGTGGCGATTCAGGGAGCGAAGACTGGCTTCTACCTGGGCATGAACAGCGAGGGTTACCTCTACACTTCCGAGAATTTCAACCCAGAGTGCAAATTCAAAGAGAGCGTGTTTGAGAACTACTATGTGACGTACTCCTCCATGCTGTACCGCCAAAGCCAGTCTGGGCGCTCGTGGTACATCGGCATCAACCGGGATGGCCAAGTGATGAAGGGCAACCGCGTGAAGAAGACCAAAGCGGCCGCACACTTCCTACCTAAAGTCATCGAAGTGGCCATGTACAAGGAACCTTCTCTGCATGAGCTTGTAGCGGAGCAGAGTCCTCCACGCAAAACCGTAAAGACTTCAGACTCCCCGTCTCACCAGAACGGCAGGAAAGAAGCCCCCAGAGCTGACGCTTCATAGCACAGGGGGCGCACACAGGGAGGGTGAGGGACTACATTGACACTGAGAACTCCATTTCCTTCATGCAACGAGGGCAGGAAGAGCTGTGTGAGCGGCTGTTAGCTGTGGGGTTTTGAATGGGGCGAGATCAGACAGCAGCCCCTGGCTCTCTGCAATGAGCGGAGAATCCCTGCCTCTCTCCGTCAAACCAGCTCACATATATTTCCACTGACCCGGCATGACACCTGACCCCCCCCCCCCCGTATGATCCCATAATCCTCtgcaaaaacatgtttctgTGCCCCCACATGCCCTACTTGAGTTCTCTCACAGTGTCAAACGGAAATGCAAACAATATCCATCCTAACGGAAGAATTCAATTGACTTTTCTTTCCCTACGGTTTCTTTTTGTTCGAACGAAAGGTTTTGGTGTGagaatgagagcgagagagagagaggttattATCCAATATCATCATAATGATTCCAGCAGATGAGACCCTTGCTGGTTCATTTTTTTCCTGCCACCACTTTGCCAAAGGCTGCTCTGAGCCAGTCAGAACTATAATAAGGAGTAcagtaaaattagtttttattggGCCATTCACGGAGAATCCAGTTCTATTGGTCAGCAGGTGTAGATTATTTTGTACTGTGAAGCCAATGGCGTCAGTTTTTGAAATTAAACACAACTCTGCAGTTCCGCTTCTTTTCCATGTCTGATATTCTCAAAAACAGCCcgataatgatgataatgagTTTAGATTGAATCCGCAACTCGAACACATCTGTTTTTGGTTTAATTATGGCTACACCTGCAGGCTGTAagacccccaaaaaaaaaaaaaaaacaactaaattctCTTGTGACGACTCTATTCATGTTTAATGGCCAGTGGGTTTGAAGCGGCATCCGTATCATTGGCAAACGAGCGAAGATTATTCGGGGCAGTTGTTTGATAGCTCTTTGATGGAATTCTTACAGGGGATTACATGGAGTCCAGCCATGATTGCTTGAATTATTTACTACTTTTCCAGAGAACGTTCGGCTCGTTCAAGCAGCTCGGGCGAGagattttaatatgcaaatttaaattGTGGCGAGCCGATCAATGACgcagtgtttgtgtgcgttCAGACGTGAGTATTAGAGTGTGAAAGAGACGGAACGATGTGAAATGAACATCTGcttccattatttatttgtgtgtgtgtgtgtggcagtcTGGGCACACGTGTGTAAATGCATTGGCTCGAACACCAcagttgatcattttaatggttCGGTCGAGTCTGGGCATTTTAATCTGCCTGGAGATGTTGACTGATGACCCTCTCTAGGTTTCATAATTGACACATAACCAAGAGGATGTGCTGTGACATCCAGGATCTCTTTGTAATTCCGCAGGCATCTTATCAGTCTACACACACCGCACTCTGTAAGTTGTTtgcaatgtgtgtgtttgagaaaagCATTGGTCAACCAGCTTCCAAATGATGCCCTTTTGTCCTACAGAAGGGAAGCAATCTCCTCTTTGAAGATGACATCACGCGTTTTTGGGCCAATAGCAGCTGGGGTTGTAGAAGGTATGGCCTGAGGTGTGATAGATTCACaactttttttgctgttgttctgtCTATCTGAGAAAGGTCATTTGTTGATTCTTATTTGTGTTTGCATGGCCTTTATGTCCTTGTGCTGTGCCCTAAACACCTGAACAGCAAAAATTACGTACGATGAATCAATGTTTGACTAacaatattgaataaaatagttTGGAAAATGCAATAGGAAGTCAGATGAATGTATAGTGGAAGTGAGGGTTTGAGCATGTTGCAGAAAGTTTTTAGCATGTTGAACCATGGTACGCGTATGTGTCTCGACGAAAGTTATTAGCAAGTTTAATATTAGAAGAATTTCCCAGTTCAATTGCATTGAATAAACAGATGTGGCATAATGTTGATTACActaaaaatgcagttaatttTTTACCtaattttctttagaaaaaaaaaaacgtgatgCACTTGAAATGGATATGAATAAggcaaatatttgtaaaaaatatttgaagttttaatttggtgaaatatttacattaattgttctgtttatatttgtacattaatATAGCAGTAAAGCGGTTTAAATTaccatttttatggttttaactGTTTCAATGTCATGGCGATTTGCAGAAGTAAAATTGAATACACTTTTATACCAAAAAAGTTAGcaagcctattttttttttacactaaaatcATGTTAACATGCAAATTTTTATATCTTGTGgctgttttattaaagaaagaaTATTTTGGGATTTATGAATTTGCCCTCTTCGCTTTCATTGTAAGTGCCTCACTCTAACCCAGATTTTTGCATcttctactttttttctttatagaaaAGGGGGGACaagagaaaattaatttttgtgttaatCAACATAATGCCACGAGTGCTGTTCATCGCGTTTAACTTGCATTGAGCCGGGAACGTTCCCGTAATGTGTGAGCATGAGAAAGTCTGGAGAAAGTTTGGTTATGCGAGACGAGATTTGGGATGAAGACGATTCGCTGGCTGCGAGAGTCTGTGAAAATCCTGAGGGCAGCTCGGTGATTGAAGTTAGCTGGTGGAGAGGAAGACGGCTTTAGAGGCATTAGATTATGAGGAGCAAAACCAGAAGATCATTAAGTTGGATTCTTGGAAGAGAACGTGTGCTTTGGTGCTAATGATGAGAGCGGGATCCTGTTCTGTGAATTAGACACGAATTGTTGCTGATTGAGCGGAAGGCGAGGAACAGAGTCCCTCTGAGGATGGGGGGAAGGGAACGTGTACGTGCGTTGTATCTACCTGGCCCGACGGAGACGTTAAGAACACAAGGACGAATGTGGTGCGCGGATACGCCCCCTCATGTGTGCTCCAAAGTCACGCTCCATTTCCTGAGCAATCTCCCCAAACCCTCTCCTGTGTGTCCAGTGGCTATTAACCTTCCCtccagctctgtgtgtgtgtgtgtgcgcgagcgagagagagagagagagagagagagagagagagagatagagcgaAGTAACGATCGATTGACTCAATAAAAGCCAAACTGGAGAGCAGTAGCCCAGCGCTGTGAGCAATAATTTCCCTGTTCAACCGAGGAACCCGAGGACATTAGCAGACGATGAactgagaggttttttttttttggggacTTTATCCGGTCGGCGGGAAAGCGGCGGAGGACGAGACAACACGGAGATAAAGTGACGTTCAGATCACAAACCCAATTTTGGTATTGTCAAATGGGCCTCGCTCGCCCGCTCCCGCTCTCTTGCTTCTGTCCAGACCTGGTTTTGCTGTGAAGTTGCTAGTATTGTGGTATCGGATCTCTCCTgactctcgctctctcttttaaATCAGGGCAAGTTCTCAAGGACACATTGAGTCCACCCTCTGTTTCATTTGCCCTCAATTCAAGCATGCAAAAAGAGTGAGACGATCAAGGGAACACTTATGAAAATTTCATGCTGTATTTTTGTGACGAAAAATAGATTTCATACTATCTATCTCAGAGGAGTAAAAGAGAacaatatgtgtatataaatccaagaaagattaaaaagtaatattaaatgcaatcaaAAAATGATGACAGTACTGTAAATGGGTGCTTTTGGGGAGATGGACTGCCTGGTCTTGCCAAAACTGCTGTGAGCCATAAGGACTGTGGACATGTACAGATTTGATTtcctttttgtatttgtttttattaaattgtgataTAAATTGCAACTAAAGGCCATTTCAcccacagtaaaaaaaaaaaaaaacgaattttaAAGAACTGATGGGTACTTCCTTGaaatttgcttttatatttagtagaaaatatgtattaacCTGAAACCTTgtatttgtttgattgttttcttttactgcTATATTTTCCCTTGTGTAAACttgttttttatgttgcttttttcctctattttgaacatttttatttcataaagcTGTGCCGTTAATGGACTAATTGGACTTCTGAGACCTCCTCACCCATACGTAGACACATGATTTCgcaaaaaaggaagaaaaaaaaaaaactcaaactgaAACATAAAAGCCAGCGCACCTTTTCCTGATCAGGTCTTCCAAACGAAAAGAAAACAAGCCAGCCCTTCTCTTCCCTGTCCTCTCGTCTTCCGAAAAAGCAAAGTCTTCCACTAGCCAGGGCTTGCCTGAATGTGGCAGTAACTGCCCAACGGAACGCAGCTTCCTGCCTAAGCCCCGCCCCTGACACGGTGAATGCAGGAACAGGCTGATTGGCTGACAGCCACTGGAGGCGGAGCTACACACACCTGCCCTATGGAGACTCGTCGAAGGCTGACCATAGACTAACAGCCTGGGTCATTTGGCCATCCCCTGCGCCCCTAACCAGCATGGCAGACGTGCTGCTCTGAAAGCCGACACACACCTGGGAGAATACTGGGACTCTACTGCATGCATCCCACTCCGGAAATACTAGGAACGGACTCCCCGTTACAGAGCACAGGATCTCCTTAGCACCCTCTACTGGCCTACAACTTGCCATCCTGTGTACGTTTCTAGAGCAATTATACATCTCTGGGTTAGGAGGAGGAAGGGGGTGTGTCTTATTACTACATATTATTGAATAAAcagttatatttgtattattgtaa

Function

symbol description
fgf11b Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus. Orthologous to human FGF11 (fibroblast growth factor 11).

NR:

description
PREDICTED: fibroblast growth factor 11-like isoform X2

GO: NA

KEGG:

id description
K22413 FGF11_12_13, FHF3_1_2; fibroblast growth factor 11/12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249877.1 True 6666 mRNA 0.45 5 7549993 7588859

Neighbor

gene id symbol gene type direction distance location
cldn7b cldn7b,LOC107586151,LOC107676017,LOC107678043,LOC107720692,LOC107552057 coding downstream 5929 7539280 ~ 7544064 (-)
LOC122352928 LOC107675999,LOC107720693,LOC107677996,LOC107552059 coding downstream 16971 7531145 ~ 7533022 (-)
LOC122352925 LOC107551999,LOC107677957 coding downstream 26859 7519599 ~ 7523134 (-)
ponzr10 LOC107552045,LOC107742363 coding downstream 30872 7514651 ~ 7519121 (-)
ugt5g2 ugt5g2,LOC107678052,LOC107552046,LOC107742408 coding downstream 35932 7511724 ~ 7514061 (-)
epob epob,LOC107676014,LOC107586154,LOC107742357 coding upstream 93036 7681895 ~ 7686300 (-)
trnal-uag_1 NA coding upstream 95783 7684642 ~ 7684723 (-)
LOC122353013 LOC107677955,LOC107554294,LOC100002544,LOC106563379 coding upstream 99282 7688141 ~ 7689495 (-)
zgc:172339 zgc:172339,LOC107720553,LOC107586200,LOC107742407,LOC107676025,LOC107554295,LOC107677954 coding upstream 103987 7692846 ~ 7694916 (-)
pcolcea pcolcea,LOC107720687,LOC107554310,LOC107678009,LOC107586222,LOC107676034 coding upstream 234550 7823409 ~ 7829584 (-)
G75549 NA non-coding downstream 61426 7487473 ~ 7488567 (-)
G75548 NA non-coding downstream 62883 7486212 ~ 7487110 (-)
G75537 NA non-coding downstream 97942 7450667 ~ 7452051 (-)
G75533 NA non-coding downstream 178075 7370932 ~ 7371918 (-)
G75532 LOC107742369,LOC107687312,LOC107586143,LOC107720700,LOC107552065,LOC107682917,LOC107677962 non-coding downstream 179924 7366811 ~ 7370069 (-)
G75633 NA non-coding upstream 20281 7609140 ~ 7616184 (-)
G75654 NA non-coding upstream 98835 7687694 ~ 7687973 (-)
G75666 NA non-coding upstream 171974 7760833 ~ 7761098 (-)
G75667 NA non-coding upstream 172666 7761525 ~ 7763853 (-)
G75749 NA non-coding upstream 508447 8097306 ~ 8099806 (-)
G75562 LOC107675999,LOC107720693,LOC107677996,LOC107552059 other downstream 5903 7530861 ~ 7544090 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other downstream 21435 7524194 ~ 7528558 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other downstream 369172 7177324 ~ 7180821 (-)
sprn2 LOC107578968,LOC107720715 other downstream 918805 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 1009020 6538122 ~ 6540973 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 262162 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 271363 7860222 ~ 7860303 (-)
trnal-uag_2 NA other upstream 273426 7862285 ~ 7862366 (-)
rnasekb rnasek,LOC107554319,LOC107720683,LOC107676000,LOC107586166 other upstream 294483 7883342 ~ 7885482 (-)
cadm2a cadm2a,LOC107720667,LOC107708610,LOC107675986,LOC107554325 other upstream 413502 8002361 ~ 9032489 (-)

Expression


Co-expression Network