LOC122352523 (ctxn3,LOC107711251)


Basic Information

Item Value
gene id LOC122352523
gene name ctxn3,LOC107711251
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 342789 ~ 348073 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249954.1
CTCCAGAGAATGACTACTAGTTGACTAGAGAGGTCTTAACAGCTGTGGCAGTACTCCGCTCACGGGACTGAGATTATAGACACATCATATTAACACACTGACAAGTGgctaatgttttttcttctagaTCTAGAATCAAATATTCAGCACACAGTGTCTGATTTCTCTGCTGGAGTGTGGCATGGATTTAAACAGCTTTAGTCACattgaatattcatgagcctGCTGCTGTTCTCCAGGAGCGTGCAGGAGTCCAACCTGTTGTTGATCAAAAGTAAAACTGATATCCTCTTAAAATAACAGCGGCTGAAGAATATTGAGGCTCCCAGACACttccattcacatttttcaaaaagcaaaagcatCCTCGGTGTAAATGACCCcttaaaactaactaaaaagaataaaaagcatCAGGATTATTGCTGGCTGTAAGACGAGAGCAAACACTGCTGAATGTTTTGAAGCTCAGAGTCACAGGGCCCTGGGAGAGACTGAAAGGGATTTTATTACAAAGAGAACAAACCTGGAGATTATTACGTGAAACAAAACCATATCCAATCAGAAAGCGAGCTGACAGAAGACCGAAGCATGATGAGAAACGAAGGATTCAGACGGCAGAGATCCATCCGTTTGAAGATTTGAAGCGTTTCCTGGAAAACACTGATTCTGAGAGATTgggagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtcttCATCCCAGTATAAGAGCACAGTGGTCAAATATAGaactttttgtcctttttgtcCTCATGTTTGTGGTCTCTCACATTTAGACAAtcttataagattaaaaaatcTTGTAGTGCGTCCTCAGCCTTAAACACAGTTCTTCAGGTGATGTTAAACGCACACAAAGATGACCGCGAAGATAAACAGTCTTTAATGGTAATACAGCCTCGAATcagaaatatgacaaaaaactgtggaaaaacaccataaaacgATGGGACTGGACAGAAACAATCATCACAAATGCTTGAGTTATTTGTAGCATTTACTTgtaatattgaaaatatgtattagaATCACAAAAAGACACTTTTTTAATCCCTCTCTGAGAACCTCTGCTAAAAGACTAGATAAACAGTCCTGAAAGATCTAGTGTACTGTACTCAATGTTACTTTAATTTACTTCAAAAAACACTATTTActctattttactattttatttttcacattttacaacTATTGCATCGAATGAAACCCATGTTTTTGTCAGCCAAACTCTGTTCTCCTGTTTCCTCCTGAGATTAATATCCTCTAATATTTTAGATATGTAAAATTAGGTCTGGTGTgagatatttattaaaagaaagcCTTGGCACTCGATGAGAAATACCATTTTTACTCCACAATCAAGAGATTTTAACCAAtgttatagatttttttcattaagaccATAAAGAACCATATTATCATGTGGAAAATGACCCTTTCTGGATAAGgattttaaacgtttaatttTTACTATGCTCCAAATTCAATTTGAGCATACTTCATTTAAGCGAATCGATTCCTTCGAACTGCtccaaacattacaaataattaactGAGTGATTAATTTCGCTCATTATATTGTCAGggctaataaaacaaaacggcGGGTCCGGTGACCGCTCCGAGAGTCCAGTTCGGACCGAAACGATCCGTTCAAACGAGTCGATTCGATTCAGAATCAACACTACGTCAAGATTCACTCCGGCGCGCTCACACAGCCGAGGCGCGAGCGTCGCGTTCACGCGTCTGCGGGTGAAGCGCTCGTCGTTTCGTGATTTTCTCCGTTCTCTGGACCGCTGCAGGTGAAGCGCTGGGCGTCGCGTCGCCGGGATGGAGCTCCGCTGGACCTGATCCGTGTGGAGATGGATAGAAGGTTCTCTTCAGGAGACAAAGacGAGCTCCACGTGGAGGATGTGAGGATGCGTGAGCGTCTGCTGTGGGACGAGCCGCTGCAGATCTCCTGGCTGATGGAGGCCGAGCCGTTCACCTCCTCCCTCCAGGCGTTGGCTCCTGTGGCGGGCCCCGGCATGACCCTGGAGCAGAAGACCACCTTTGCCTTCGTCATCTTCCTCTTCGTCTTCCTCTGCATGCTGATCGTGCGCTGCTTCCGTATCCTGCTGGACCCCTACCGCAGCATGCCCACCTCCACCTGGGCCGACGGCCTGGACGGCCTGGAGAAGGGACAGTTTGACTACACGCTGgcgtagacacacacacacacacacacacacaccgctcaCTGCCATCCACATACACTACTAGATGTTGTTTGAGAAGATAAGTGTGCAGTGGTTTATCTTCCAGGTCGAGCGGATCTGGAGACACAGGGTAGCCCTCTTTTATATCCTCGTCCCGTCCTCGTGTGTCTGTGCTGTCTTTAACTGCCAAGTACAAACCTCTAGAAGAGAAGCTCTTTCTAAGACCGTTTATAAGCACTTCATATGACGCTTTTGTCGAAatagccttaaaaaaaaacgtccaCCGTCAAAGTTTACATGATTCATTCCTGGCAGGTACTGCAGAGCTTCTGGTCACATCCTGGCCTTTTTAGAGATGACTACGCAGTTAGGACAGGCTTCTTAGATGAGCTGCTGATTCATAGCGTGTGCAACACGTGGCTCCTTCACAGGTTCTTTACGTCAGAAAGGATCTGTCAGCCTTAGCACAATAAATACTCCTAGATCTACCTGTATGTTCGTAGGCTGTAGTTTCGTAAGCCTTAACCCGTGAAGCTGCCATCAGGAGAAGCATCGTAATGTGAAGTCGCACGAGCCATTTAGGTCTTCCATCCTTCGAACGCTAGTCTAGAAAACCCACGCTCTCGAGAGCCGAGGTGAACGCTCCTCTTCCTCACCGGTGATAATCGTGATGATTTTAGTTGCACTACTTCATTGAACCTGCTGTCACTGTGAAAGAGCACTCAGTCAAGGACGTGTCATCCTGATTTAACAATCCTGTTTGAAAGACGGAAGAGATCGGTTTTCATCGTTCCTCGTGAAGCTGCTCTCTAGACCAAGCACTAAACGGCTGTCTGTGAGTTTCAGTACAGTGTGTGGAGCCTCAAAACTATTAGACCTTCATACTGTTTAGAAATAAGTGTCTATAAAACAGAGAAGTAATACAAAGCACCAGTATATTCAAACACAAGATAAAGCTGAATTacaatgctttgttttaatagtGTCACGACCTCATTTATGTCTCAAAGAgatgatgaataaaacatttccaaagCAGACA

Function

symbol description
ctxn3 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: cortexin-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249954.1 True 3280 mRNA 0.44 2 342789 348073

Neighbor

gene id symbol gene type direction distance location
slc12a2 slc12a2,LOC107680742 coding downstream 10785 293192 ~ 332004 (-)
slc27a6 slc27a6,LOC107726974,LOC107568002,LOC107669786 coding downstream 116580 210872 ~ 226209 (-)
isoc1 isoc1 coding downstream 132442 204696 ~ 210347 (-)
LOC122353055 kiaa1024l,LOC107551403 coding downstream 140081 197792 ~ 202708 (-)
prrc1 prrc1,LOC107572184,LOC107565848,LOC107705848 coding upstream 1341 349414 ~ 358819 (-)
lmnb1 lmnb1,LOC107673755,LOC107705849 coding upstream 51091 399164 ~ 406433 (-)
phax phax coding upstream 59036 407109 ~ 411325 (-)
apbb1 apbb1,LOC107750985,LOC107573909,LOC107673752 coding upstream 73428 421501 ~ 432642 (-)
LOC122352790 LOC107686441,LOC107744170 coding upstream 167710 515783 ~ 520940 (-)
G73550 NA non-coding downstream 6396 335758 ~ 336393 (-)
G73518 NA non-coding downstream 12888 329277 ~ 329901 (-)
G73510 NA non-coding downstream 50528 291166 ~ 292261 (-)
G73515 NA non-coding downstream 57567 285009 ~ 285222 (-)
LOC122352556 NA non-coding downstream 76372 265490 ~ 266417 (-)
G73570 NA non-coding upstream 156367 504440 ~ 506118 (-)
G73613 NA non-coding upstream 176217 524290 ~ 524870 (-)
G73619 NA non-coding upstream 201122 549195 ~ 550288 (-)
G73623 NA non-coding upstream 229987 578060 ~ 579146 (-)
G73624 LOC103390470 non-coding upstream 279705 627778 ~ 635728 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 251468 40690 ~ 91321 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other upstream 11731 359804 ~ 396620 (-)
G73662 NA other upstream 345375 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 441350 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 537083 885156 ~ 888012 (-)
G74058 NA other upstream 1097250 1445323 ~ 1448886 (-)

Expression


Co-expression Network