pptc7b (pptc7b,LOC107744096,LOC107713343,LOC107685147,LOC106563180,LOC105909313)


Basic Information

Item Value
gene id pptc7b
gene name pptc7b,LOC107744096,LOC107713343,LOC107685147,LOC106563180,LOC105909313
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 623272 ~ 633992 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249977.1
TGCGCTCTGACGTCACCGCCGCCGGTCACGTGGCCTCAGAGCCCGTGCGTGCTCGTCTCCGGAGCGAGCGAGCGCGCACTCGAGGATGTCGGATAGGATGGAGCGCGCTGGAGAAACTTTGTCCAAGACATAAAGGAGCCGTGTATCTGAAGAAGAAAGGCGCTTGGATCACTTTTAAAGCGGCTCGCTTCCACTGCGGAGCCGAATGTCGGTGCGCGGATCCTAGAGACGCACGCTCACCGAACACCGCGGGGGATGTTATCGGTACTCTCCTACGGCAGGATCGTGGCCAGGGCTGTCCTGGGCGGACTGTCGCAGACGGACGGCAGAGATTACCGCCTGATCACGGCCAGCTGCGGCTTCGGGAAGGACTTTCGCAAAGGGATCCTGAAGAAGGGCATGTGCTACGGAGACGACGCCTGCTTCATCGCCCGGCACAAGTCCGCGGACGTCCTGGgggtTGCGGACGGCGTCGGGGGCTGGAGGGATTACGGCGTGGACCCGTCTCAGTTCTCTGCCACCCTGATGAAGACGTGTGAGCGGCTGGTGAAGGAGGGACGCTTCACTCCCAGCAGCCCCGTGGGCATCCTGACCTCCGGGTACTACGAGCTCCTGCAGAACAAAGTACCGCTGCTGGGGAGCAGCACAGCTTGTATAGTGGTGCTGGACCGCCGGAGTCACAGGATACACACCTGTAATCTGGGAGACTCGGGCTTCCTGGTGGTTCGGGGTGGAGAGGTGGTCCATCGGTCAGACGAGCAGCAGCACTACTTCAACACTCCCTTCCAGCTGTCCATCGCCCCGCCGGGGTCAGAGGGCGTGGTGCTGAGTGACAGTCCTGAGGCGGCAGATAGCTCTTCCTTTGATGTCCAGTTAGGGGACATCATTTTGACCGCTACTGACGGCCTCTTTGACAACATGCCTGACTACATGATCCTGCAAGAGCTCAAGAAACTCAAGAACACCAACTATGACAGCATTCAGCAGACGGCCCGCAGCATCGCTGAGCAGGCCCACGAGCTGGCCTACGACCCCAACTACATGTCCCCTTTCGCCCAGTTTGCCTGTGATAACGGCTTGAATGTAAGAGGGGGGAAGCCTGACGACATCACGGTGCTTCTGTCCATCGTGGCGGAGTACACCGACTGAGAGCTCGCTCGTCTCTTACTCCCGTGTCTTCCACCCCTGCTCTATTGCACTGCTCCCATCTCACTTCTCCCAGCATCCCTTTCCATTCTTCCGTTTCTCGAGTAGATCTCCAGTCGGCGCGGGGAGGAGGATAGCATGAGCGGTACAGACAGTCCGAAAAGAATGACCTCAGTTGTGTCCAAAAGGATTTTGGGAATCTTCAAGCCGTGTCGTAATTTGAGTCATTGAGCCACGCGTTACCCACAGAAAGTGTTTTCTAATGGGAGAAGCGGGTGGCTTGTGTAAATTAAATGCTTGGTCGTCTGTGTGTTGAGAGAGAAGTTTAGCATCTCTTTGGAGTGcctctgtgtttttgttaacCTGAAACGGGAAGGTAGGTTAAAGTTAAGGAGGCTTGGCTAGATTTAAACCTGTTGGGAAACGCAAGTGCTTTAGGACGTGCCGGCTAATTCTGTTCGGCCGGTATATCTACTTCTAGTTAGACAGCCTTCATCTACACCGTCGCTTCGAGGTCCTGGATGACGGATTGCAAGTTCAGAGGCGGGAAGGAGAAGGGTTGAGTTTGGTTATAAAAGACTGCAGACGTTACTCAGAGTAGTGGCATATTTAGGTTTAGAGATTACAGTGAGTTCAAGAGATCAAACCCATTGTTCGCAATAAAGTTAGTGAAAATGACATGATCTAGGACCTTTGTACACTTCGTAAAGACTAAGTATATTTCCCTGGTGTCTGACCTGACTGAGGTCtgcgcgctcacacacacacacacacacactcacgggGTTGATGATGGATGTTGACTGTGAATGCGTGTTGGATGTATATATACGACCCTTGAGGTTTAAAGTCTACACGCACAAATGGCTCGCATCTGGCAATGCTTTTCATGAATTGAAAGGTCaggtatataaatacatgttttatttttataaatacttagCTTTTAGTGGACAAGATTCAACAGAATGCCGAAGTCGGGGAAGGCCGGATCGGCCGGTGTTTTCTGTGCTCCCTAGCGAGGCTcgggttatttttttaatcgatTGAAGGGTATCTGatgcttcttgttttttttcctgtgtcgCTCTAGATGGGTTCTAGAGAACTTTCTCACATTCATGTGCTGCTTTAATTTCgtaaattataaatgtgtgagtgactacattatttatatgactgtttttaactgtacaataaaaaatgGGTGAGCTATTGGCCATTTCACTTCACGAAGGCGGATCCGGATCACTGATTCTATGAGACGCATCAACTATAATTGTTTAGACTGAGAAAACAAAGCAATACGGTTTTTCAAAATGTCGTTCTGTTTCTTCAGTGTCTGAAATCTTGTGCATGTCTAGGACGGCAAACCTCAGTCAGGTATGAAACTAAAGCTGGAACGCATGATCCCTGAACACACAGCCGGTCCTCTGCTCTCTCACTACATGCAATGTCTTGTGGGTCGAGGTCATGTTAAAATCGGTCTGTGTGTACACGATAAAGCAAACCAAAGCAGGAAAGCCATAGGACCAGCGTGACCGAGGTGTTCTCACGCGTCGCCTACAAGAGCGCAATGATTTCCCAAATCTGCTTTACTTTCTAGATAAACGAGATCATCTGAACAGTCAGTCACGTGTGATGTTTATTCTGTTGTGTACCTGTCCGTTACAAACTGTGTGATCTAGtagtcttttattttattcgaAGGTGATGTGATATGGGCGCCTCCAGAGGCAGAGGGGAGAACTgcaattagtgtttttttagtcAGACCATTTTTTTGGATCAGAAATGCCTAAAATGGACGTGGTATTagccacaattaaaaaaaacaaacctctaaatattattagaaatgcatttaattgtaaCTTTTGCATATTGTTCAATCCTGATCACTTTTTCCCCACGTGATCTAGCTTGTCTTCTGTTTATATCGTCATCTACTCCAAGGTGTCTTGGTATTGCAGTCTATGTGCTGTAAGACCGGATATTGACGTTTTGAACGAACAAACTCGTCAGATGAATTGTTTTACTAGTTAAATGACGTGCGGTTAGTTCAAAGCGACTCTTCTGTCTCTGGCGGCCTGAGGATGTCACGTCTCCTCGCTCGTTCGTGTCGCTGCATGAGGCCGTGTTGTGACTGAACCTTTGTGTCTGGAGTTTCATCACTATGTTTGCCGCACGGCACACCCTTTTCCGAATTCCCTGCTCGTGGCTCGTCCAGAAGATGCGCTTTCGCCGGTTCTGGTGCGGTCGTCATTTCAAAACGGGAACGTCGGGCTGATAGCGACCGAACCAGGACAAATCCACATGCCATTTGCGCCTTAAAATCTCATAGTGTCCATCCAGAGGCCTTTGTGTGGCTTGCAGCAGTGTCCTGATTCCGGTGTGGTCTGTCCTTCTCTCTTCTGGTGGTTTCTATGGTGCTTCTGCGGTCCAGATGAGTCTCAGTCTCTGAAGCAGACGATGTGCGAATGAGAATACACTTTTTGTGTGTACAGTGTAACAATGCAAGAAAAGTTCctgtaaatatgttttccaagttgtaaaatatttaaataaaaaaatatagtatttatacTAAA

Function

symbol description
pptc7b Predicted to enable metal ion binding activity; protein serine phosphatase activity; and protein threonine phosphatase activity. Predicted to be active in mitochondrion. Orthologous to human PPTC7 (protein phosphatase targeting COQ7).

NR:

description
PREDICTED: protein phosphatase PTC7 homolog

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K17508 PTC7, PPTC7; protein phosphatase PTC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249977.1 True 3737 mRNA 0.49 6 623272 633992

Neighbor

gene id symbol gene type direction distance location
hvcn1 LOC107686438,LOC107744097,LOC107562590,LOC107685148,LOC107575472 coding upstream 6529 613874 ~ 616743 (+)
mtrex skiv2l2,LOC107744101,LOC107571110,LOC107713350,LOC107686493 coding upstream 59118 536408 ~ 564154 (+)
pstpip2 pstpip2,LOC107744171,LOC107685173 coding upstream 107636 507604 ~ 515636 (+)
sub1a sub1,LOC107686443,LOC107562553,LOC107685153,LOC107713349,LOC107571107,LOC107552599 coding upstream 117152 504360 ~ 506120 (+)
aldh7a1 aldh7a1 coding upstream 202818 412893 ~ 420454 (+)
tbc1d10ab tbc1d10a,LOC105895496,LOC106579927 coding downstream 3678 637670 ~ 649638 (+)
aplnrb aplnrb,LOC107713340,LOC107685146,LOC107686435,LOC107562592,LOC107744094 coding downstream 29959 663951 ~ 665777 (+)
LOC122353206 NA coding downstream 40616 674608 ~ 680564 (+)
itga1 itga1,LOC107686433,LOC107685143,LOC107595560,LOC107562550 coding downstream 75502 709494 ~ 748934 (+)
LOC122352656 itga2,LOC107713336,LOC107744146,LOC107686486 coding downstream 117488 751480 ~ 765669 (+)
G73560 NA non-coding upstream 194002 428856 ~ 429270 (+)
G73559 apbb1,LOC107750985,LOC107673752,LOC107565841 non-coding upstream 195757 424953 ~ 427515 (+)
G73519 NA non-coding upstream 226171 349033 ~ 397101 (+)
G73523 NA non-coding upstream 275365 347548 ~ 347907 (+)
G73465 NA non-coding upstream 331005 287869 ~ 292267 (+)
G73589 NA non-coding downstream 18552 652544 ~ 653003 (+)
G73588 NA non-coding downstream 19622 653614 ~ 673309 (+)
G73656 NA non-coding downstream 161343 795335 ~ 795689 (+)
G73710 NA non-coding downstream 171378 805370 ~ 805665 (+)
G73711 NA non-coding downstream 173626 807618 ~ 807846 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other upstream 224413 396440 ~ 398859 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other upstream 337032 242243 ~ 286240 (+)
pmaip1 NA other downstream 49114 683106 ~ 774374 (+)
isl1b NA other downstream 58132 692124 ~ 695923 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other downstream 162019 796011 ~ 801923 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other downstream 300077 934069 ~ 945860 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 443704 1077696 ~ 1084039 (+)

Expression


Co-expression Network