ankrd55 (ankrd55,LOC107702571,LOC107670032,LOC107737049)


Basic Information

Item Value
gene id ankrd55
gene name ankrd55,LOC107702571,LOC107670032,LOC107737049
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3808014 ~ 3818485 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250033.1
aatagaaagaaagaaagaaagagtccCCAGGGACGTGCTGAAGTTCTCCCTTTTGGGAATCACTGGTTGAAGAAATAAAGTtgagaatacacacacacacacacacacacacacactgctttcaGCAGGCAGTGAAGTGCAGCTTCTGCACATGCTCAGTGTGTTTCCCACCACACCACGCACAATCACACAGAGCAGCCCCTCCACCTGCCTCCTCCTCCAGGAGCTCGTGCTCACGCGTCCGCGACGCCTGccgcgtctctctctctctctctctccgggtCTTTCTCCGTTCCCCGCGCGAGCGCTCCGAGTCGCAGTCAGGAGCGGAGGCGACATCATGTCGTGGGCACCAGAGGGATTTCTCTAAAGGCTGCGTCCGATCTGCTATGGAGTTCAACTCTTCATCTGTATTTGAGCAGCATAAAGAGGCTGCTGAGGAGGTTGATCTGAATGCGGTGTACCAGGCAGCAGCGAACGGAGATGTGAACACGCTGACTGCCACGATACGAGAGGACCCGTCCATCCTCGAGTGCTGCGACAGTGAAGGCTCCACGCCGCTGATGCATGCTGTGTCCGGGAGGCAGGTGGACACGGTCAAACTGCTGCTGAAGATGGGAGCCTCTATAAACACGCAGGATGCCTGCGGACGGACATCCCTCTCTTTGGCGACATACCTGGGCTGGCTGgaaggctgtgtgtgtttgcttcgCAACGGGGCGAAACAGAACATTCCCGATAAGAACGGACGCTTGCCAATTCATGCTGCTACCGCCGAAACCGACTTCAGGCTCATGGCTGTGCTGCTACAGCAGTCGACACTGTGTGAAATCAACCATCAAGACAATGAGGGCATGACGGCTCTTCATTGGGCTTCTTTCCACAACCGGCCGGAACATGTGCAAGCCCTCCTGCAGAAGGGAGCCGACCCCACGCTTGTGGACAAAGACTTTAAAACAGCTCTTCACTGGGCTGTGCAGAGTGGCAGCCGGTTAATGTGTTCTCTCATTCTTGATCATCATCTTGGCCCGTCTGTGATCAATTACGATGACGAGAACGGGAAGACCTGCGTTCACATTGCCGCCGCTGCAGGTTTCAGCGACATCATCTATGAACTGTCTCGCATTCCTGAGACCAACCTACAAGCTTTAGACGTGGATGAACGGACCCCTCTTCATTGGGCCGCTGCAGCAGGGAAAGATGACTGTGTGCAGGTATTGTTGGAGCTGGGAGTGGAACCCAACCCTCGAGATATTAATGAGAATACACCACTCACGTACGCCATGTATTGCGGTCATACAGCATGCATCAAACTCCTCTCCACTGAAAACAGGTCTGAGTCAAGCAGGCCACTGCACGCCCAAAACAGTGACTCTTCTATACGCAAGGAGGGGAAATTTCGCATGTTGAACCAGATCTTCtgcaagaagaagaaagagctgCATCCTTCTCATCAGACAGACTTGAGTCAAGAATGTCAGCTGAAAGAGGAGACGTCTGAGGTGGATGACATCATCACTATGTTCGACTGCGTCGCCGAGCCATTAACCAGAGATGAGAGCGAAAACAGCTCCGTTATCAGAAAACGAAATAATGAGTCTGAGAAAGTCCACCTCATTGAAGACACATCCAGCAAGGACTTTCAAAGTCTCCCACCCATACGCACACAGAGTCTTCCTCCAATCACTCTAGGGAAGTCCCTGCTGGTAAACTCTCAGGCTTTGGCCCACAGGACCAGTGGAGGTCATGTGGCAGGACATTTAGCGCACAGGTCACAGAAGAGCAAGAGCGAGCATGACCTGTTCGATGGCAAAAGTAAGGATCAAAAAGCTGCCGGACAGGTGTGGAAGACTGAATCCAGTCAGATACTGACTCACAAAGCATGGATCTCGACACCTTCTGAACGGCTGCTTGACAAGCTGCTGCATGGATCCTCAAGCCCTTTAGACGTGCTTTGCTCAAATCATGCGCCATACATACAGAGACATGATCAAGCTCAGAACCCTCTTTTTCCTCTGAGGGTCAGAGAATCTGCTCTCACACGTAACAGTCTGGCTCCTATCCGTGACCACTGCACTCACAGATTTTCCTTGCCACCAGACCAGGTCTCTCAGGGAGTGAAGAAGTCGAAATCCTCGTTAGGAGCGGGCCTGGCTGTACTTCCGCCTCCGTTTGCATCCAAACTGCCCCGAGCCGGCATTCCTCAAAGCCAGTCGTTCGGCTCGTTCCCGACGCCTCTGGCAGGAGAACCTTTACGAAACATTCAAGTCCTTCCTGCCATTCCTCCGCAGAGAAAACGCAGTCCATCTCCGCTCACAACGCAGAATCTCTCAGACAACAGAAACTGATGGAAATCTGACCTCTAAGACTGTTCAGCTGTCACATGGATTTAATTAGGTTCACGAGGACGCTGAAGAATCACTGTTTTTCATACAATTTTACAACTATGATATTTTTTATGGTATGCATATTGTCGAAATTTTgactgtaatatttaaacactttaagcTTACTGTTACTATTAATAAAGGAAATTGCCGAA

Function

symbol description
ankrd55 Acts upstream of or within glucose homeostasis and type B pancreatic cell development. Orthologous to human ANKRD55 (ankyrin repeat domain 55).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 55

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250033.1 True 2542 mRNA 0.51 11 3808014 3818485

Neighbor

gene id symbol gene type direction distance location
auh auh,LOC107720385 coding upstream 17834 3773510 ~ 3790180 (+)
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding upstream 35304 3768754 ~ 3772710 (+)
ror2 ror2,LOC107702585,LOC107683466 coding upstream 40341 3709666 ~ 3767673 (+)
sptlc1 sptlc1,LOC107715883,LOC107720388,LOC107702586,LOC107683465,LOC107560407 coding upstream 99700 3697541 ~ 3708314 (+)
carm1l LOC107702592,LOC107715849,LOC107679043,LOC107573847 coding upstream 167153 3627167 ~ 3640861 (+)
il6st LOC107715880 coding downstream 2852 3821337 ~ 3834370 (+)
st8sia4 st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405 coding downstream 64774 3883259 ~ 3891247 (+)
syk syk,LOC107715877,LOC107736968 coding downstream 93780 3912265 ~ 3935837 (+)
map3k1 map3k1,LOC107558252,LOC107670047,LOC107715839 coding downstream 141556 3960041 ~ 3999938 (+)
hmgcs1 hmgcs1,LOC107715876,LOC107737058 coding downstream 183314 4001799 ~ 4009370 (+)
G74585 NA non-coding upstream 39362 3768201 ~ 3768652 (+)
LOC122353153 NA non-coding upstream 220120 3587363 ~ 3587894 (+)
G74392 NA non-coding upstream 1026697 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 1091257 2716522 ~ 2716757 (+)
G74388 NA non-coding upstream 1091722 2715379 ~ 2716292 (+)
G74596 LOC107715844 non-coding downstream 35831 3854316 ~ 3858952 (+)
G74626 NA non-coding downstream 73406 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 302379 4120864 ~ 4122658 (+)
G74680 NA non-coding downstream 332973 4151458 ~ 4153279 (+)
G74681 zgc:194281,cunh5orf30,LOC107665462,LOC107740794,LOC107670048,LOC107564120,LOC107715868 non-coding downstream 336562 4155047 ~ 4160317 (+)
cdc42se2 cdc42se2 other upstream 113418 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 140008 3663912 ~ 3668006 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other upstream 190498 3588244 ~ 3617516 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other downstream 194549 4013034 ~ 4120447 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other downstream 662782 4481267 ~ 4529002 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 1298381 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 1419794 5238279 ~ 5250137 (+)
G74965 NA other downstream 1438353 5256838 ~ 5258823 (+)

Expression


Co-expression Network