si:ch211-256e16.3 (si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741)


Basic Information

Item Value
gene id si:ch211-256e16.3
gene name si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14620986 ~ 14629074 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250046.1
CTCGTCTGCTCATTCCTGCGCCTCAGtctgtttttaaagaagaaGACATGGCGTCACGACTCTTCATAAACAGTTGCAGGTGAAGATATGAAGATTTTGAGCTGCCGTATAAACATAGACATGTTTTTCGCCTGATTGAGTGTTAAGATGGAAATTATGGCTGTGAACCTGCTGGCCACCTCTCCGTCCACCTCCACGCTCCCTCCGTCTCCGTGTGTGGAGGACTCCGGTTTCCCGTTGTCCTCTCTGGACAGCGAAGACTACGTGTTTGTGGAAACGCGGCATCCCAACAAAGTGCTGGAGGGTTTGAACAGCTTGCGGCTCAATAACGCCTTCTGCGATGTGACTCTGTGCTGCGGAGGGCAGGAGTTTCCCTGTCACCGCATTGTACTGGCCTCCTTCAGCTCTTATTTTCAGGCCATGTTCTCCACCGACCTGATGGAGTCTCGTCAGGAGCGGGTGGCCATCAACGGCGTGGAGCCCCAGATGATCGGCATGCTGGTGAGCTACGCCTACACAGCAGAGGTGGTGATCTCCAAGGCGAACGTGCAGGCGCTCCTGGCGGCCGCCAATCTGCTGGACGTGATGGCGGTGCGGGAGGCCTGCTGCAGGTTCATGGAGCGACAGATGGACGAGATGAACTGTGTGGGCATCCACTGCTTCGCCGAGGCGCACTCGTGCCGAGAGCTGGAGCGACGCAGCATGGAGTACATCCAGCAGCACTTCAGCACCGTTTGCCAACAGGAGGAGTTTCTGTCTCTTTGTGCCGATAAACTGACCGAGATCGTTTCAAGTGACCATCTGAATGTGCCGAAAGAGGAGACGGTGTTTGAGGCGGCCGTCGTGTGGCTGGAGAAGAACCCTTCACGCAGACAGAGCTTCGAGAAGGTTCTGGAGCACATCAGACTGCCCCTAATCAGTCCGTACTACATTCACGACGTCATCGAGACTCTGGACGTTGTGAAGGAGTCGCTCAAGTGCCAGAAGCTGATCTCTGAAGCCAAGGACTATCTACTGCTGCAGGACCGCAGAGGAGAGCTGTACAGCCCTCGAGCGCGACCCCGGCGAGCAACAGGCACAGCTGAGGTGATTGTGACCGTGGGAGGAGAAGACGATAAGGTTGTTCTACGCAGCGTGGAGAGTTTCGATCCCCTCACCAGTCAGTGGAAGAGCCTGGCCTGCCTGCCCTTCGCCGTCAGCAAACACGGCTTGGTCGTGTCTGGCTCCATGCTGTATTTGGCTGGCGGCGAGTTCCCAGACGGCTCGGCCAGCAGAGAGATGTGGCGTTATGACCCGTGTTTCGACTCCTGGACAGAGATGGCACCCATGAACGTGGCTAGATCAGAACTAGGGTTGGTGATGCTGGATGGATACGTCTTTGCTGTGGGAGGCTGGGAAGGCCGTTCTCGCCTGGACTCTGTCGAGTGTTACAATCCTCAGACGAACACTTGGCAGTTTATGGAATCGGTCAAGATGGCGGTCACCAGTCCGGCTGTGGTGGCGCTGGATGGATTGCTCTATGTGACAGGAGGTGCTGTTTTAGAAGACGGCGACGGCACAAACTTGGCGCAAGTGTACAACCCTAAAACGTGCGTGTGGGCAGAGGTGGCGCCCATGCAGATCGCCCGCTCTGGATCTGCTGCCTGCATCCTGAAGGGCAAGATATATGTCATAGGTGGCTGGCACGCGTCCACCGAGAACACTGATAAGGTGGAGTGCTACGACCCCAAGACCAACAAGTGGACCATGTGTGCTCCCATGAAGGAGAGGCGTTATCGGCCCGGCGTGGCGGTGGTGGACGGAAAGATTTACGTTTTAGGAGGAGAGGAGGGATGGGACAGGTACCATGACACTATAGAGCGGTACTGTGAGGAGTCGGACAGCTGGGAGATCGTCGGAGAGATGCCCACCAGCCGAAGCTGGCTGAGCTGTGTCTCTCTGCAGCTCCGGAAGGACACTCAGGTGGGCAGCCGTCCCGGCACTGCCTTGGAGACGGAGTTTCCCGTGGACTGAGAGGACCAGAGCTCCACCCGCATCACTGCCAGCCGAGACGGCTGCTTTCAGAGCGTCCCGCTCCGCCAGAGCTATTGAGGAACGGAAAAGGTCCGACCCAAACTCTGGAGGGTCTTCAGAAAATACTCGTGTCATAAGCTATGCTTTCTCCAGCCTGACCCTCTAGCACGGTGTGAGGCTGGATGGATCGATGATATCTgtggtgtttttgtgtgtgtgtgtgtgtgtgtgtgtgaagcgcCATCCCAGAGTCTCCACAGTATCAGTTCAATGTGATGTTCAAGTGACGTACAGGGTTCCTTCCATGCGCTGAGCACCTCATGATTGTGACTTAACACAAGTACCTTTGTTTTCTAACAGTGTTGTAGTGAAacgttttgtaatttttgtacggtgatttttgttgtttttgtatttattggaCGTTTTTTGTTGTACTGAGAGATTTATGGAGTAACTAGCACAGATACACTGAAACGTGACtttctttaaaggaaaagttcacccaaaaattgtAATTGTCATCATTTGTTTTACTCTCAAGTCTTTTGTTGAACACACGATGATGGTGAGCAGTTTCTGTGCCGTTGACCTCCATAATAtaaaagtcaatggggaccagaAACTGTAccaacattcaaatgttttgttgtttttaacatatGAAAGATGCTCATATAGGTTTAGAATaacttaagggtgagtaaatgatgacagatgttttatttagggtgagctatcccttttaAAACCGTAATTAGTCTTCATATTGTgcacagtatgtatgtatgtatacccAGATTACCTTCTACATTTGCCAAAATGTTTAGCATACAGAAGAGCACAGCGTGCTGGGTATtgtttcccacaatgcaatgtgtTCAGCTCAATCATCCACAGTATGAAGAATGAACCTGAATTACAGCTGCATTTTTACCATC

Function

NR:

description
PREDICTED: kelch-like protein diablo

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250046.1 True 2954 mRNA 0.52 11 14620986 14629074

Neighbor

gene id symbol gene type direction distance location
LOC122352591 uqcrc2a,LOC107671252,LOC107717493,LOC107552131,LOC107674831 coding downstream 2376 14611801 ~ 14618610 (-)
mosmoa c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding downstream 9763 14591019 ~ 14611223 (-)
sdr42e2 sdr42e2,LOC107726803,LOC107654653,LOC107717482,LOC107552104,LOC106592406 coding downstream 52793 14554997 ~ 14568193 (-)
mfsd13al zgc:171489,mfsd13b,LOC107726812,LOC107573382 coding downstream 74835 14541530 ~ 14546151 (-)
si:ch211-165g14.1 LOC107726816,LOC107573383,LOC107673826 coding downstream 80148 14532487 ~ 14540838 (-)
LOC122352450 NA coding upstream 482338 15111412 ~ 15115448 (-)
LOC122352451 LOC106676183,LOC106674878 coding upstream 676461 15305535 ~ 15306408 (-)
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding upstream 678825 15307899 ~ 15315868 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding upstream 687574 15316648 ~ 15341965 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding upstream 718393 15347467 ~ 15362276 (-)
G77514 NA non-coding downstream 123532 14495498 ~ 14497454 (-)
LOC122353010 NA non-coding downstream 155666 14460368 ~ 14465320 (-)
G77480 LOC107575404,LOC107692500,LOC107728752 non-coding downstream 195499 14424513 ~ 14425487 (-)
G77476 NA non-coding downstream 252431 14366281 ~ 14368555 (-)
G77472 NA non-coding downstream 259252 14361354 ~ 14361734 (-)
G77669 NA non-coding upstream 473075 15102149 ~ 15103569 (-)
G77672 NA non-coding upstream 509533 15138607 ~ 15139007 (-)
G77674 NA non-coding upstream 527275 15156349 ~ 15156591 (-)
G77676 NA non-coding upstream 530391 15159465 ~ 15159847 (-)
G77692 NA non-coding upstream 644839 15273913 ~ 15276004 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 31087 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 135694 14484799 ~ 14485292 (-)
LOC122353009 LOC107562038,LOC107562041 other downstream 139537 14467186 ~ 14481449 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other downstream 277974 14340046 ~ 14343012 (-)
G77443 NA other downstream 356664 14234506 ~ 14264322 (-)
G77671 NA other upstream 478063 15107137 ~ 15107752 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other upstream 600895 15229969 ~ 15289672 (-)
G77702 NA other upstream 728611 15357685 ~ 15358232 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 1263570 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 1387597 16016671 ~ 16021774 (-)

Expression


Co-expression Network