arrb2a (arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026)


Basic Information

Item Value
gene id arrb2a
gene name arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7872539 ~ 7880100 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250066.1
GTACGGTAGCTCCGCCCACCTCCAGCTACAGGAGCTGCTGCTGTTTACACTCTTGTGCGCCGTAGCAGTGTGTTTTCCTCCACAAATTCCCACGGCCAAATTCTCCCTCATTATGGGGGACAAGGCAGGCACCCGGGTCTTTAAGAAATCCAGTCCAAATTGCaagCTTACGGTATATTTGGGAAAAAGAGATTTTGTGGATCATCTAGATCATGTGGACCCTGTTGATGGCGTGATTCTGGTCGAACCTGAATATCTCAAAGATAGGAAAGTATTTGTGACCTTAACCTGTGCTTTCCGGTATGGCCGTGAGGACCTTGACGTTCTAGGCCTCTCCTTCCGAAAAGATCTCTACATCTATACTTTTCAGGCCTATCCTCCCATTCCAGAGGAATCCAAGCCCCACAGTCGTCTGCAGGAGAGGCTTTTGAAGAAACTAGGACAGAATGCCTATCCTTTTCATTTCACTATACCGCAAAACTTGCCATGTTCTGTTACTCTGCAGCCTGGGCCTGAGGACACAGGAAAAGCATGTGGTGTGGATTTTGAGATCAGGGCTTTCTGCGCCAAAACGATGGAAGAGAAGAACCACAAAAGGAACTCTGTGCGACTAGTGATACGCAAAGTCCAGTATGCTCCTGAGAAACCCGGCCCACAGCCGATGGTGGAGACGACGAGGAGTTTCCTCATGTCAGACCGGTCCTTACACCTAGAGGCTTCACTAGATAAAGAGCTGTATTACCATGGGGAACCCATCAGTGTTAACGTCCATGTTACCAACAACTCAACCAAGACTGTCAAAAGGGTTAAAATATCAGTACGACAGTATGCTGATATCTGTCTCTTCAGTACAGCACAGTACAAATGTCCAGTGGCTCAGATCGAGGCAGATGATCAGGTGGCCTCCAGCTCTACTTTTTGTAAAGtatacacactcacacccaCTCTCAACAACAACCGAGAGAAGAGAGGACTGGCGCTGGACGGAAAACTCAAGCATGAGGACACCAACCTGGCGTCCAGTACTATTGTGAAGGACGTGAGTAATAAGGAAGTTCTGGGTGTCCTGGTGTCCTATCGGGTCAAAATCAAGCTGGTGGTGTCCCGTGGAGGGCTTTTAAGCAGCTTGCTGGAGAGGGACGTCTCAGTGGAACTGCCTTTTGTCTTAATGCATCCAAAACCTACAGATTCCACCCTTCTACATTCAACCTCAGCTGCTCCAATGTTGGATCCACCAATTGACACCAACTTGATAGAGTTCGACACAAAAAGTTTAACTCCAGATGACGACATTGTGTTTGAGGACTTTGCTCGCTTACGGTTAAAAGGAATAATCGACAAGGAAGAGGACTGCTGAATTTTTATCATCTCGTTCATCAAGAGCAGAAGTGCTTTTCATCAAATTGCATCTTGACTCCTAACGGGTGTAACAGTGAACGATCATCTCATTATGAAAGAAGCAGTATTGGGATATTTTACTGAAAACTggagaaaagacagaaagacttAATATGCATATGAAAAGCTAACGAAGGAAGGGATTCCAGggaatttcatacatttttgcatagGCATGTGAAAATTATATCTCTTATACTGTGCCAGCTCTTATGTTATGAACAGAAATCCAATTTGTGAAGGTGGTGAAATTTGATccatatttattactttttaccGAGAAGGTTATGTGTTCTGTGTGCGGTATGGACAGACGGATGTTTTCATTGACACGGGCTGTGCATGTTTCTCAGAGCTACTGTGAGGATCATATGTGATcgaatatattgttttaatgcgagatgtaaatatatgaaagtgCTGCTTTTAATTTGACCGCTgcattggtttaaaaaaaaaaagttcatgtaTAGCAATTTAACATCCCTCAGGAGAAAGGAAAGGTGTTGCGTTATTACAACTTTCATACATACAGAATACActgtttgccattttattttttcttttaaacttgaatttttatttaatttttttaataaaacgaaTAGAAAAACA
>XM_043250067.1
GTACGGTAGCTCCGCCCACCTCCAGCTACAGGAGCTGCTGCTGTTTACACTCTTGTGCGCCGTAGCAGTGTGTTTTCCTCCACAAATTCCCACGGCCAAATTCTCCCTCATTATGGGGGACAAGGCAGGCACCCGGGTCTTTAAGAAATCCAGTCCAAATTGCaagCTTACGGTATATTTGGGAAAAAGAGATTTTGTGGATCATCTAGATCATGTGGACCCTGTTGATGGCGTGATTCTGGTCGAACCTGAATATCTCAAAGATAGGAAAGTATTTGTGACCTTAACCTGTGCTTTCCGGTATGGCCGTGAGGACCTTGACGTTCTAGGCCTCTCCTTCCGAAAAGATCTCTACATCTATACTTTTCAGGCCTATCCTCCCATTCCAGAGGAATCCAAGCCCCACAGTCGTCTGCAGGAGAGGCTTTTGAAGAAACTAGGACAGAATGCCTATCCTTTTCATTTCACTATACCGCAAAACTTGCCATGTTCTGTTACTCTGCAGCCTGGGCCTGAGGACACAGGAAAAGCATGTGGTGTGGATTTTGAGATCAGGGCTTTCTGCGCCAAAACGATGGAAGAGAAGAACCACAAAAGGAACTCTGTGCGACTAGTGATACGCAAAGTCCAGTATGCTCCTGAGAAACCCGGCCCACAGCCGATGGTGGAGACGACGAGGAGTTTCCTCATGTCAGACCGGTCCTTACACCTAGAGGCTTCACTAGATAAAGAGCTGTATTACCATGGGGAACCCATCAGTGTTAACGTCCATGTTACCAACAACTCAACCAAGACTGTCAAAAGGGTTAAAATATCAGTACGACAGTATGCTGATATCTGTCTCTTCAGTACAGCACAGTACAAATGTCCAGTGGCTCAGATCGAGGCAGATGATCAGGTGGCCTCCAGCTCTACTTTTTGTAAAGtatacacactcacacccaCTCTCAACAACAACCGAGAGAAGAGAGGACTGGCGCTGGACGGAAAACTCAAGCATGAGGACACCAACCTGGCGTCCAGTACTATTGTGAAGGACGTGAGTAATAAGGAAGTTCTGGGTGTCCTGGTGTCCTATCGGGTCAAAATCAAGCTGGTGGTGTCCCGTGGAGGGGACGTCTCAGTGGAACTGCCTTTTGTCTTAATGCATCCAAAACCTACAGATTCCACCCTTCTACATTCAACCTCAGCTGCTCCAATGTTGGATCCACCAATTGACACCAACTTGATAGAGTTCGACACAAAAAGTTTAACTCCAGATGACGACATTGTGTTTGAGGACTTTGCTCGCTTACGGTTAAAAGGAATAATCGACAAGGAAGAGGACTGCTGAATTTTTATCATCTCGTTCATCAAGAGCAGAAGTGCTTTTCATCAAATTGCATCTTGACTCCTAACGGGTGTAACAGTGAACGATCATCTCATTATGAAAGAAGCAGTATTGGGATATTTTACTGAAAACTggagaaaagacagaaagacttAATATGCATATGAAAAGCTAACGAAGGAAGGGATTCCAGggaatttcatacatttttgcatagGCATGTGAAAATTATATCTCTTATACTGTGCCAGCTCTTATGTTATGAACAGAAATCCAATTTGTGAAGGTGGTGAAATTTGATccatatttattactttttaccGAGAAGGTTATGTGTTCTGTGTGCGGTATGGACAGACGGATGTTTTCATTGACACGGGCTGTGCATGTTTCTCAGAGCTACTGTGAGGATCATATGTGATcgaatatattgttttaatgcgagatgtaaatatatgaaagtgCTGCTTTTAATTTGACCGCTgcattggtttaaaaaaaaaaagttcatgtaTAGCAATTTAACATCCCTCAGGAGAAAGGAAAGGTGTTGCGTTATTACAACTTTCATACATACAGAATACActgtttgccattttattttttcttttaaacttgaatttttatttaatttttttaataaaacgaaTAGAAAAACA
>XM_043250068.1
GTACGGTAGCTCCGCCCACCTCCAGCTACAGGAGCTGCTGCTGTTTACACTCTTGTGCGCCGTAGCAGTGTGTTTTCCTCCACAAATTCCCACGGCCAAATTCTCCCTCATTATGGGGGACAAGGCAGGCACCCGGGTCTTTAAGAAATCCAGTCCAAATTGCaagCTTACGGTATATTTGGGAAAAAGAGATTTTGTGGATCATCTAGATCATGTGGACCCTGTTGATGGCGTGATTCTGGTCGAACCTGAATATCTCAAAGATAGGAAAGTATTTGTGACCTTAACCTGTGCTTTCCGGTATGGCCGTGAGGACCTTGACGTTCTAGGCCTCTCCTTCCGAAAAGATCTCTACATCTATACTTTTCAGGCCTATCCTCCCATTCCAGAGGAATCCAAGCCCCACAGTCGTCTGCAGGAGAGGCTTTTGAAGAAACTAGGACAGAATGCCTATCCTTTTCATTTCACTATACCGCAAAACTTGCCATGTTCTGTTACTCTGCAGCCTGGGCCTGAGGACACAGGAAAAGCATGTGGTGTGGATTTTGAGATCAGGGCTTTCTGCGCCAAAACGATGGAAGAGAAGAACCACAAAAGGAACTCTGTGCGACTAGTGATACGCAAAGTCCAGTATGCTCCTGAGAAACCCGGCCCACAGCCGATGGTGGAGACGACGAGGAGTTTCCTCATGTCAGACCGGTCCTTACACCTAGAGGCTTCACTAGATAAAGAGCTGTATTACCATGGGGAACCCATCAGTGTTAACGTCCATGTTACCAACAACTCAACCAAGACTGTCAAAAGGGTTAAAATATCAGTACGACAGTATGCTGATATCTGTCTCTTCAGTACAGCACAGTACAAATGTCCAGTGGCTCAGATCGAGGCAGATGATCAGGTGGCCTCCAGCTCTACTTTTTGTAAAGtatacacactcacacccaCTCTCAACAACAACCGAGAGAAGAGAGGACTGGCGCTGGACGGAAAACTCAAGCATGAGGACACCAACCTGGCGTCCAGTACTATTGTGAAGGACGTGAGTAATAAGGAAGTTCTGGGTGTCCTGGTGTCCTATCGGGTCAAAATCAAGCTGGTGGTGTCCCGTGGAGGAGTGCTGTACTTTAGCTGTTAAAATATTGCAGGATGCTGagctttgtgttttatattccCTCCCTGAACCCTCGCCTCTCTGTGCTGCTTCGTTCTGGTTATCAAATCATTTTGCCATTCTCCCATTgttttatgtctctctctctttctgtgtgtttccTTCCCTTCCATCTGTCTCTTGCGTCAGGCTTTTAAGCAGCTTGCTGGAGAGGTAAATACATCCATTGTGCATTCTGGTGTTTGCTGTAGCGTCTCTTGGTTTGCCCTACAAAGGAGATCTGCATGGTGTTCAATGCTCTGCTCAACTCTATCCTGACATTTCCTGACTGATATTTATAGTGTTAGAGCACTAACCTTAACACACGTGAAACCGCATGTATGGATGAATCTCACTAAGAAATGTCTTAGTCATAATTTTAACTCTGTATCTGaagaaagacattttataatgtaaatattgccTGTTTTGGGCCTCTTTATTACACAAATTATCCtgtataaattttattttaaatgataaaattatgtatgtaAAACAAATACTGCTACAACGAAGTATATTTGCAGTTGTACTCTTTTATACAAGATttgttttggagtttttttcacaattttcaatttaaaatatgtatatattttaaagaaccagGTGAAACATAAGGATTGACAAATGATAATGGGcagattatatttttagaattttat
>XM_043250069.1
GTACGGTAGCTCCGCCCACCTCCAGCTACAGGAGCTGCTGCTGTTTACACTCTTGTGCGCCGTAGCAGTGTGTTTTCCTCCACAAATTCCCACGGCCAAATTCTCCCTCATTATGGGGGACAAGGCAGGCACCCGGGTCTTTAAGAAATCCAGTCCAAATTGCaagCTTACGGTATATTTGGGAAAAAGAGATTTTGTGGATCATCTAGATCATGTGGACCCTGTTGATGGCGTGATTCTGGTCGAACCTGAATATCTCAAAGATAGGAAAGTATTTGTGACCTTAACCTGTGCTTTCCGGTATGGCCGTGAGGACCTTGACGTTCTAGGCCTCTCCTTCCGAAAAGATCTCTACATCTATACTTTTCAGGCCTATCCTCCCATTCCAGAGGAATCCAAGCCCCACAGTCGTCTGCAGGAGAGGCTTTTGAAGAAACTAGGACAGAATGCCTATCCTTTTCATTTCACTATACCGCAAAACTTGCCATGTTCTGTTACTCTGCAGCCTGGGCCTGAGGACACAGGAAAAGCATGTGGTGTGGATTTTGAGATCAGGGCTTTCTGCGCCAAAACGATGGAAGAGAAGAACCACAAAAGGAACTCTGTGCGACTAGTGATACGCAAAGTCCAGTATGCTCCTGAGAAACCCGGCCCACAGCCGATGGTGGAGACGACGAGGAGTTTCCTCATGTCAGACCGGTCCTTACACCTAGAGGCTTCACTAGATAAAGAGCTGTATTACCATGGGGAACCCATCAGTGTTAACGTCCATGTTACCAACAACTCAACCAAGACTGTCAAAAGGGTTAAAATATCAGTACGACAGTATGCTGATATCTGTCTCTTCAGTACAGCACAGTACAAATGTCCAGTGGCTCAGATCGAGGCAGATGATCAGGTGGCCTCCAGCTCTACTTTTTGTAAAGtatacacactcacacccaCTCTCAACAACAACCGAGAGAAGAGAGGACTGGCGCTGGACGGAAAACTCAAGCATGAGGACACCAACCTGGCGTCCAGTACTATTGTGAAGGACGTGAGTAATAAGGAAGTTCTGGGTGTCCTGGTGTCCTATCGGGTCAAAATCAAGCTGGTGGTGTCCCGTGGAGGTTAGAGTGCTGTACTTTAGCTGTTAAAATATTGCAGGATGCTGagctttgtgttttatattccCTCCCTGAACCCTCGCCTCTCTGTGCTGCTTCGTTCTGGTTATCAAATCATTTTGCCATTCTCCCATTgttttatgtctctctctctttctgtgtgtttccTTCCCTTCCATCTGTCTCTTGCGTCAGGCTTTTAAGCAGCTTGCTGGAGAGGTAAATACATCCATTGTGCATTCTGGTGTTTGCTGTAGCGTCTCTTGGTTTGCCCTACAAAGGAGATCTGCATGGTGTTCAATGCTCTGCTCAACTCTATCCTGACATTTCCTGACTGATATTTATAGTGTTAGAGCACTAACCTTAACACACGTGAAACCGCATGTATGGATGAATCTCACTAAGAAATGTCTTAGTCATAATTTTAACTCTGTATCTGaagaaagacattttataatgtaaatattgccTGTTTTGGGCCTCTTTATTACACAAATTATCCtgtataaattttattttaaatgataaaattatgtatgtaAAACAAATACTGCTACAACGAAGTATATTTGCAGTTGTACTCTTTTATACAAGATttgttttggagtttttttcacaattttcaatttaaaatatgtatatattttaaagaaccagGTGAAACATAAGGATTGACAAATGATAATGGGcagattatatttttagaattttat
>XR_006251892.1
GTACGGTAGCTCCGCCCACCTCCAGCTACAGGAGCTGCTGCTGTTTACACTCTTGTGCGCCGTAGCAGTGTGTTTTCCTCCACAAATTCCCACGGCCAAATTCTCCCTCATTATGGGGGACAAGGCAGGCACCCGGGTCTTTAAGAAATCCAGTCCAAATTGCaagCTTACGGTATATTTGGGAAAAAGAGATTTTGTGGATCATCTAGATCATGTGGACCCTGTTGATGGCGTGATTCTGGTCGAACCTGAATATCTCAAAGATAGGAAAGTATTTGTGACCTTAACCTGTGCTTTCCGGTATGGCCGTGAGGACCTTGACGTTCTAGGCCTCTCCTTCCGAAAAGATCTCTACATCTATACTTTTCAGGCCTATCCTCCCATTCCAGAGGAATCCAAGCCCCACAGTCGTCTGCAGGAGAGGCTTTTGAAGAAACTAGGACAGAATGCCTATCCTTTTCATTTCACTATACCGCAAAACTTGCCATGTTCTGTTACTCTGCAGCCTGGGCCTGAGGACACAGGAAAAGCATGTGGTGTGGATTTTGAGATCAGGGCTTTCTGCGCCAAAACGATGGAAGAGAAGAACCACAAAAGGAACTCTGTGCGACTAGTGATACGCAAAGTCCAGTATGCTCCTGAGAAACCCGGCCCACAGCCGATGGTGGAGACGACGAGGAGTTTCCTCATGTCAGACCGGTCCTTACACCTAGAGGCTTCACTAGATAAAGAGCTGTATTACCATGGGGAACCCATCAGTGTTAACGTCCATGTTACCAACAACTCAACCAAGACTGTCAAAAGGGTTAAAATATCAGTACGACAGTATGCTGATATCTGTCTCTTCAGTACAGCACAGTACAAATGTCCAGTGGCTCAGATCGAGGCAGATGATCAGGTGGCCTCCAGCTCTACTTTTTGTAAAGtatacacactcacacccaCTCTCAACAACAACCGAGAGAAGAGAGGACTGGCGCTGGACGGAAAACTCAAGCATGAGGACACCAACCTGGCGTCCAGTACTATTGTGAAGGACGTGAGTAATAAGGAAGTTCTGGGTGTCCTGGTGTCCTATCGGGTCAAAATCAAGCTGGTGGTGTCCCGTGGAGGAGTGCTGTACTTTAGCTGTTAAAATATTGCAGGATGCTGagctttgtgttttatattccCTCCCTGAACCCTCGCCTCTCTGTGCTGCTTCGTTCTGGTTATCAAATCATTTTGCCATTCTCCCATTgttttatgtctctctctctttctgtgtgtttccTTCCCTTCCATCTGTCTCTTGCGTCAGGCTTTTAAGCAGCTTGCTGGAGAGGGACGTCTCAGTGGAACTGCCTTTTGTCTTAATGCATCCAAAACCTACAGATTCCACCCTTCTACATTCAACCTCAGCTGCTCCAATGTTGGATCCACCAATTGACACCAACTTGATAGAGTTCG

Function

symbol description
arrb2a Predicted to enable angiotensin receptor binding activity. Acts upstream of or within regulation of chemokine activity and regulation of receptor recycling. Predicted to be active in cytoplasm. Is expressed in presumptive segmental plate; somite; and tail bud. Orthologous to human ARRB2 (arrestin beta 2).
arrb2 Enables angiotensin receptor binding activity and ubiquitin protein ligase binding activity. Involved in several processes, including cellular protein metabolic process; desensitization of G protein-coupled receptor signaling pathway; and negative regulation of NF-kappaB transcription factor activity. Located in several cellular components, including cytosol; endocytic vesicle; and nucleoplasm. Biomarker of portal hypertension.

NR:

description
PREDICTED: beta-arrestin-2 isoform X1

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K04439 ARRB; beta-arrestin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250066.1 True 2013 mRNA 0.43 16 7872539 7880100
XM_043250067.1 False 1989 mRNA 0.43 15 7872539 7880100
XM_043250068.1 False 1818 mRNA 0.43 13 7872539 7878636
XM_043250069.1 False 1822 mRNA 0.43 13 7872539 7878636
XR_006251892.1 False 1449 transcript 0.48 15 7872539 7879241

Neighbor

gene id symbol gene type direction distance location
ap4m1 ap4m1,LOC107554303,LOC107702797,LOC107742404,LOC107720677,LOC107586161,LOC107675998 coding upstream 1091 7866335 ~ 7871448 (+)
LOC122353466 NA coding upstream 8627 7863779 ~ 7863912 (+)
tmem88a tmem88a,LOC107554311,LOC107720688,LOC107742406,LOC107586221,LOC107676001 coding upstream 54838 7812206 ~ 7817701 (+)
kdm6bb LOC107676007,LOC107742353,LOC107720684,LOC107586158,LOC107554308,LOC107678007 coding upstream 62456 7782188 ~ 7810083 (+)
efnb3a efnb3a,LOC107742355,LOC107720690,LOC107678015,LOC107586157,LOC107676033,LOC107554296 coding upstream 125143 7709173 ~ 7747396 (+)
med11 med11,LOC107720680,LOC107702800,LOC107676028 coding downstream 1785 7881885 ~ 7883525 (+)
c10h17orf49 zgc:103508,LOC107720679,LOC107742347,LOC107702799,LOC107675997,LOC107586165,LOC107554320,LOC105902403 coding downstream 5514 7885614 ~ 7889230 (+)
si:dkey-175g6.2 si:dkey-175g6.2,LOC107702794,LOC107720675,LOC107554299,LOC107586203,LOC107742340,LOC107676019 coding downstream 51983 7932083 ~ 7936387 (+)
slc25a1a slc25a1a,LOC107720673,LOC107554324,LOC107586170,LOC107708615,LOC108424536,LOC108276564 coding downstream 67206 7947306 ~ 7951626 (+)
ltn1 ltn1,si:dkey-175g6.5,LOC107720671,LOC107702790,LOC107708613,LOC107675987,LOC107554323 coding downstream 76734 7956834 ~ 7999036 (+)
G75591 LOC107720685,LOC107586160,LOC107676011 non-coding upstream 12827 7840598 ~ 7859712 (+)
G75593 LOC107678008 non-coding upstream 23303 7845219 ~ 7849236 (+)
G75583 NA non-coding upstream 37640 7806361 ~ 7834899 (+)
G75574 NA non-coding upstream 190099 7682154 ~ 7682440 (+)
G75502 NA non-coding upstream 383972 7487475 ~ 7488567 (+)
G75607 NA non-coding downstream 21123 7901223 ~ 7902731 (+)
G75629 NA non-coding downstream 156034 8036134 ~ 8069911 (+)
G75766 NA non-coding downstream 285348 8165448 ~ 8165704 (+)
G75774 NA non-coding downstream 405055 8285155 ~ 8285865 (+)
G75799 NA non-coding downstream 433461 8313561 ~ 8314122 (+)
trnat-agu_2 NA other upstream 10506 7861960 ~ 7862033 (+)
trnas-gcu_13 NA other upstream 10865 7861593 ~ 7861674 (+)
LOC122353465 NA other upstream 11160 7861246 ~ 7861379 (+)
si:ch211-237l4.6 NA other upstream 50021 7817810 ~ 7822518 (+)
G75496 LOC107720595,LOC107677995 other upstream 507208 7360984 ~ 7365331 (+)
G75750 NA other downstream 221376 8101476 ~ 8102924 (+)
LOC122352912 fam136a,LOC107569401,LOC107562571,LOC107713366,LOC107744116,LOC107686460,LOC107688083 other downstream 699909 8580009 ~ 8581128 (+)
G75935 LOC107556871,LOC107718714,LOC107720665,LOC107592158 other downstream 833103 8713203 ~ 8716277 (+)
G75937 NA other downstream 853679 8733779 ~ 8734996 (+)
gbe1a gbe1,LOC107685012,LOC107708609,LOC106581537,LOC108410718,LOC105900410 other downstream 1196766 9076866 ~ 9207335 (+)

Expression


Co-expression Network