hrh2b (hrh2b,LOC107678001,LOC107552049,LOC107720559,LOC107742384)


Basic Information

Item Value
gene id hrh2b
gene name hrh2b,LOC107678001,LOC107552049,LOC107720559,LOC107742384
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7381076 ~ 7386994 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250087.1
AGACACACAAACTCAAACAGACAAGCATTATCTGGCTGTTACAGCGCTGTGAACGCCAGCTCATGCAGGAATCAGGAGTTTCACCTGCAGAATGAACGAACCTGAGCTGATGGCCACACATGTTAATATCATGGCAGTTTTATAGCACTCCTGAAACGCAATGCTTGAGGAAAGAGATGACACACGGTGTCCTGACTGAACTTCTGAATTACtgactacaaaacaaaaatctccaAACTTTCCTTCAGAAGCTAACGATGTTGTTCACTGCCCTGCGCTGGGTGGTACTGGTGGCCTTCATCGCACTGACCGTTTGTGGAAATGTTCTCGTTTGTCTAGCAGTGGCCACCAGTCGGCGTCTGCGTCATATTAGTAGCTGTTTTATACTCTCACTGGCTGTGACAGACTTGCTGCTGGGTTTGCTGGTGCTTCCGCTCTCTGCCATGCTGGAGTTACGCAATGGGAGATGGCCCCTCGGGGGTGTTTTTTGCAACATCTACATTTCTCTGGATGTGATGCTCTGCAGTGCTTCAATCCTCACCCTACTGGCCATTAGTGTCGATCGTTACCTTGCCATTTCCAACCCTCTCTGCTATCCCAGGAGGGTCACACCTCGTCGGGTTGGGATCACTCTGACTGCGATCTGGACGTGCTCTCTGGCTGTGTCCTTTGTGTCTATTAACCTAGGCTGGAACACACTTGACTATAGAGTACAGAACCTGGACTGGGCCATGTGGGATGAAGGAGAGGAAGGCAGGACCTGCCGATATGAATGGAAAAATAATTACGTCTTGCTGAAAGCCTTTTTAATCTTCTACCTCCCTCTGCTGGTCATGTGTGGAATGTACCATCGTATATTCTGTGTTGCACGTGAACAGGTTCGGCGTATACGTGCAACCATTCCTTCATTTGCGCAGGCTGCAAAAGCAGTTGCCATTGCACAGGAACACAAAGCCACGGTGACCCTGGCTGCAGTGCTTGGTGCCTTTGTCGTTTGCTGGTTCCCCTATTTCACCTACTTTGCATGCATGGGTATGTGGGCAGACACCCACCCGGACAAAATGACCCACTCTGTTGTTCTTTGGCTGGGATACCTCAACTCTGCTCTGAATCCTATTCTTTACCCAGCCTTGAACCGGGATTTCCGTCGGGCATGCGGACAGCTGCTCTGCTGCAGACGTAGCCATCAGGGGGAATTGCCGTTTGTTCACCCCTTTTAAATGAACAGGatcaaatatttttctgtaatgaAAACTCACCTCAACTCATTTCACACTGCGGTGAATACATCAAGTGTAAGAATGGACACTGATCAATGACAATCAATACCAATATAAGACTCAACAATATACGAATGTAACTTAAAATTCCAAAATGTACCATGggtcaaaaatacataatacctTTTATTACATGACTTTTCATTAACCTATTGAATCTGTGGTTATGCGGATCTATGTGATGTTTGTAAGTAAAAATCTCTGGATTCCTggttatgtatatttttcatataacaAGAGTAAGAATTTGTAaatcacattacattacatataaaatttCCTAAAAAAAGGT

Function

symbol description
hrh2b Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane. Orthologous to human HRH2 (histamine receptor H2).

NR:

description
PREDICTED: histamine H2 receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0045907 positive regulation of vasoconstriction biological_process
GO:0001696 gastric acid secretion biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004969 histamine receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250087.1 True 1572 mRNA 0.45 3 7381076 7386994

Neighbor

gene id symbol gene type direction distance location
LOC122353014 LOC107720700,LOC107552065,LOC107742369,LOC107586143,LOC107687312,LOC107682917,LOC107677962 coding upstream 9143 7362680 ~ 7371933 (+)
cbln17 LOC107720595,LOC107677995 coding upstream 18538 7361078 ~ 7362538 (+)
LOC122353122 pcdh1g33,LOC107720701,LOC103911742,LOC107677963 coding upstream 72419 7305710 ~ 7308657 (+)
LOC122353125 LOC107677985,LOC107720701,LOC107687322,LOC107586138 coding upstream 85876 7292612 ~ 7295200 (+)
LOC122353126 LOC107586138,LOC107677986,LOC107687322 coding upstream 88595 7289342 ~ 7292481 (+)
kcnip1b kcnip1b,LOC107720696,LOC107552061,LOC107742366,LOC107586147,LOC108444575,LOC103024145,LOC102788752,LOC101476742,LOC107676032 coding downstream 63923 7450917 ~ 7483453 (+)
npm1a LOC107678029,LOC107720694,LOC107552000 coding downstream 97408 7484402 ~ 7487356 (+)
LOC122352927 NA coding downstream 146194 7533188 ~ 7538271 (+)
nlgn2b nlgn2b,LOC107554306,LOC107678031,LOC107720555,LOC107675989,LOC108443341 coding downstream 228410 7615404 ~ 7681744 (+)
gigyf1b gigyf1,LOC107554307,LOC107586156,LOC107676024,LOC107742356,LOC107678014 coding downstream 308322 7695316 ~ 7708220 (+)
G75498 NA non-coding upstream 14471 7365417 ~ 7366605 (+)
G75371 LOC107564544,LOC107678039,LOC107708655,LOC107586135,LOC107720713,LOC108437809,LOC105905969 non-coding upstream 621431 6734932 ~ 6759645 (+)
G75361 NA non-coding upstream 725166 6644036 ~ 6655910 (+)
G75236 LOC107678050 non-coding upstream 801147 6578172 ~ 6579929 (+)
G75230 NA non-coding upstream 836831 6542088 ~ 6544245 (+)
G75513 NA non-coding downstream 11051 7398045 ~ 7399363 (+)
G75514 NA non-coding downstream 12434 7399428 ~ 7400033 (+)
G75516 NA non-coding downstream 15139 7402133 ~ 7408121 (+)
G75502 NA non-coding downstream 100481 7487475 ~ 7488567 (+)
G75574 NA non-coding downstream 295160 7682154 ~ 7682440 (+)
G75496 LOC107720595,LOC107677995 other upstream 15745 7360984 ~ 7365331 (+)
LOC122353118 pcdh1g1,pcdh1g2,pcdh1g3,pcdh1gb2,pcdh1g9,pcdh1g11,pcdh1gb9,pcdh1g18,pcdh1g33,pcdh1gc5,pcdh1g32,LOC107677968,LOC107742392,LOC107688304,LOC107720705,LOC107552007,LOC107677966,LOC107586189,LOC107742391,LOC107688284,LOC107688294,LOC107586188,LOC107720703,LOC107677965,LOC107586192,LOC107742390,LOC107586191,LOC107552005,LOC107720701,LOC107688268,LOC108191536,LOC107552066,LOC107586138,LOC107687322,LOC107677986,LOC107677985,LOC103911742,LOC107677983,LOC107742370 other upstream 40881 7197537 ~ 7340195 (+)
LOC122352414 pcdh1a3,zgc:123181,pcdh1a4,LOC107742396,LOC107552012,LOC107586180,LOC107720566,LOC107720564 other upstream 217853 7153586 ~ 7163223 (+)
G75422 pcdh1a6,LOC107677970,LOC107552011,LOC107677969,LOC107742394,LOC107720565,LOC107586182,LOC107742396 other upstream 230495 7142293 ~ 7150581 (+)
trpc7a trpc7a,LOC107677994,LOC107720592,LOC107552051,LOC105905985,LOC108437819,LOC106603261 other upstream 387455 6981492 ~ 6993621 (+)
si:ch211-237l4.6 NA other downstream 430816 7817810 ~ 7822518 (+)
LOC122353465 NA other downstream 474252 7861246 ~ 7861379 (+)
trnas-gcu_13 NA other downstream 474599 7861593 ~ 7861674 (+)
trnat-agu_2 NA other downstream 474966 7861960 ~ 7862033 (+)
arrb2a arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026 other downstream 485545 7872539 ~ 7880100 (+)

Expression


Co-expression Network