paqr3b (paqr3b,LOC107713330,LOC107685136,LOC107595565,LOC107744080,LOC107597624,LOC108433513,LOC108276876)


Basic Information

Item Value
gene id paqr3b
gene name paqr3b,LOC107713330,LOC107685136,LOC107595565,LOC107744080,LOC107597624,LOC108433513,LOC108276876
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 898230 ~ 901850 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250148.1
GTGTCGCAGGATTTTAATGTCACACACTCGCGTCGTTAGCCTTTAGCCGCTCGGCTAATCGCCGGTCACCAACATCAATATGACGCTCACATTCTGTTATTAATCGGAAATTAAGAAACCAGTAGGGCTGGATGGGATAGACGGCGGGTCTTTACCTGGAGAGGGACACCGCCTTAGTGAGACACACATTGGCCTTGCTCCTCCAGCCACATGAACCAAGATGCCTCAGAACATCCTCAAGAGCACTCATTACATCGAGCTGGGCAGCTATCAGTACTGGCCCGTGCTCGTGCCCCGAGGAATCCGGCTGTACACCTACGAACAGATCCCAGTGTTCCTGAAGGAGAATCCCTACATCACGGATGGATACAGAGCGCACCTGCCGTCCAAACTGTGCCTCAAAAGCATATTCATCCTGTCCAACGAGAGCGTGAACATCTGGAGCCATCTGCTCGGGTTCCTGCTGTTCTTCTCGCTGGGAGTGAATGACATGGCCACGGTCCTGCCGTCCGCGGGGGCTTCTCGAGAGGACTACGTCATTTACTCGATCGGACTGTTTTGTTTCCAGGTCTGCATGCTGTGCTCCGTGGGCTATCACTTGTTTTGTTGTCATCGCTCGGAGAAGACGTGCCGCCGCTGGCTTGCTCTGGACTATGCTGGAATATCTGTGGGCATTTTGGGATGCTATGTGCCTGGAGTCTTCTATGCCTTCTACTGCAACAGTTTCTGGAGGCAGGTGTACCTGCTGACGGTGCTGGCTCTCATCCTGGCCGTGTTCGCGGCTCAGATTCATCCGCTCTACCTCACGCAGCAGTGGAAGAAGCTGCGCTCGGCCATGTTCTGCTCGGTGGCCGGGTACGGCATCATCCCGGCCTGCCACTGGGTCTGGCTCAACGGAGGATTCCACTCCGAAATCGTGAAGGTGTTTTTTCCTCGAGTCATGGTCATGTATCTGATTGCCGCCTCGGCGTTCCTGTTCTACGTCAGTAAGATCCCAGAAAGATACTTTCCAGGCCAGCTGAACTATCTCGGAGCCAGTCATCAGCTCTGGCATGTTCTGGTGGTGGTCATGTTCTACTGGTGGCATCAAACCGCCATCTACATCATGAAGTACAGACACAACCAGCCCTGCACGGACTACAGCAGTCATGGCTGAACGGTTATAGAATCACCTGTTCAACGTAGTCATTGGGGTTTTGTTTGGCATTATTTTAAGTTAGAATCAACTAAACTTTACCTCTCATTGGCCTTCGAACACCCTACTGTGGGGTAACGTGCATCGAAAATCACGTCTGGAGCAATCATAAATATTCTCTGCTGGATATCAAGTGTCTTTGTCTGTTACTTCATGTAGTTTGTTTTCTATCGAGCCTTTTTCTCATGGTACCATTGGGTTTGTGAAACTATACATATGACGCTATGACTTTTCTGGAATGTCCTTAATTGAAATGCTCTTAACTATCACTGTTCTCTGACTGATGAATACTACGGTAATACTGATTTTAGTGTTTGTTAAAGGGACTTGTTTTGAagtattaaacacatttgagtTCATGTGTAAAGCAGCACTGGAAAATGGGCATTTAAATGACCAAGAAAGCATTACTTTAGTAGTTTTTGTGAACAAATGGGTCAAAATCACTATACTTGCACTGAATTGATTATAAACATATATCAGGTTCTAGCCTACAAAATCTTTTGTGCGTTTCATCTCCTCCTTTTTAAACGTGTCTTGTTGCTCGTTTTTCTTTGAGTTGCCGCAAACGGCTTGTCTGAATATGAATtgtgaaactgaataaaaaaatcttgtttgtaCTCGT
>XM_043250149.1
TTTTAATGTCACACACTCGCGTCGTTAGCCTTTAGCCGCTCGGCTAATCGCCGGTCACCAACATCAATATGACGCTCACATTCTGTTATTAATCGGAAATTAAGAAACCAGTAGGGCTGGATGGGATAGACGGCGGGTCTTTACCTGGAGCCACATGAACCAAGATGCCTCAGAACATCCTCAAGAGCACTCATTACATCGAGCTGGGCAGCTATCAGTACTGGCCCGTGCTCGTGCCCCGAGGAATCCGGCTGTACACCTACGAACAGATCCCAGTGTTCCTGAAGGAGAATCCCTACATCACGGATGGATACAGAGCGCACCTGCCGTCCAAACTGTGCCTCAAAAGCATATTCATCCTGTCCAACGAGAGCGTGAACATCTGGAGCCATCTGCTCGGGTTCCTGCTGTTCTTCTCGCTGGGAGTGAATGACATGGCCACGGTCCTGCCGTCCGCGGGGGCTTCTCGAGAGGACTACGTCATTTACTCGATCGGACTGTTTTGTTTCCAGGTCTGCATGCTGTGCTCCGTGGGCTATCACTTGTTTTGTTGTCATCGCTCGGAGAAGACGTGCCGCCGCTGGCTTGCTCTGGACTATGCTGGAATATCTGTGGGCATTTTGGGATGCTATGTGCCTGGAGTCTTCTATGCCTTCTACTGCAACAGTTTCTGGAGGCAGGTGTACCTGCTGACGGTGCTGGCTCTCATCCTGGCCGTGTTCGCGGCTCAGATTCATCCGCTCTACCTCACGCAGCAGTGGAAGAAGCTGCGCTCGGCCATGTTCTGCTCGGTGGCCGGGTACGGCATCATCCCGGCCTGCCACTGGGTCTGGCTCAACGGAGGATTCCACTCCGAAATCGTGAAGGTGTTTTTTCCTCGAGTCATGGTCATGTATCTGATTGCCGCCTCGGCGTTCCTGTTCTACGTCAGTAAGATCCCAGAAAGATACTTTCCAGGCCAGCTGAACTATCTCGGAGCCAGTCATCAGCTCTGGCATGTTCTGGTGGTGGTCATGTTCTACTGGTGGCATCAAACCGCCATCTACATCATGAAGTACAGACACAACCAGCCCTGCACGGACTACAGCAGTCATGGCTGAACGGTTATAGAATCACCTGTTCAACGTAGTCATTGGGGTTTTGTTTGGCATTATTTTAAGTTAGAATCAACTAAACTTTACCTCTCATTGGCCTTCGAACACCCTACTGTGGGGTAACGTGCATCGAAAATCACGTCTGGAGCAATCATAAATATTCTCTGCTGGATATCAAGTGTCTTTGTCTGTTACTTCATGTAGTTTGTTTTCTATCGAGCCTTTTTCTCATGGTACCATTGGGTTTGTGAAACTATACATATGACGCTATGACTTTTCTGGAATGTCCTTAATTGAAATGCTCTTAACTATCACTGTTCTCTGACTGATGAATACTACGGTAATACTGATTTTAGTGTTTGTTAAAGGGACTTGTTTTGAagtattaaacacatttgagtTCATGTGTAAAGCAGCACTGGAAAATGGGCATTTAAATGACCAAGAAAGCATTACTTTAGTAGTTTTTGTGAACAAATGGGTCAAAATCACTATACTTGCACTGAATTGATTATAAACATATATCAGGTTCTAGCCTACAAAATCTTTTGTGCGTTTCATCTCCTCCTTTTTAAACGTGTCTTGTTGCTCGTTTTTCTTTGAGTTGCCGCAAACGGCTTGTCTGAATATGAATtgtgaaactgaataaaaaaatcttgtttgtaCTCGT
>XM_043250150.1
GTGTCGCAGGATTTTAATGTCACACACTCGCGTCGTTAGCCTTTAGCCGCTCGGCTAATCGCCGGTCACCAACATCAATATGACGCTCACATTCTGTTATTAATCGGAAATTAAGAAACCAGTAGGGCTGGATGGGATAGACGGCGGGTCTTTACCTGGAGAGGGACACCGCCTTAGTGAGACACACATTGGCCTTGCTCCTCCAGCCACATGAACCAAGATGCCTCAGAACATCCTCAAGAGCACTCATTACATCGAGCTGGGCAGCTATCAGTACTGGCCCGTGCTCGTGCCCCGAGGAATCCGGCTGTACACCTACGAACAGATCCCAGTGTTCCTGAAGGAGAATCCCTACATCACGGATGGATACAGAGCGCACCTGCCGTCCAAACTGTGCCTCAAAAGCATATTCATCCTGTCCAACGAGAGCGTGAACATCTGGAGCCATCTGCTCGGGTTCCTGCTGTTCTTCTCGCTGGGAGTGAATGACATGGCCACGGTCCTGCCGTCCGCGGGGGCTTCTCGAGAGGACTACGTCATTTACTCGATCGGACTGTTTTGTTTCCAGGTCTGCATGCTGTGCTCCGTGGGCTATCACTTGTTTTGTTGTCATCGCTCGGAGAAGACGTGCCGCCGCTGGCTTGCTCTGGACTATGCTGGAATATCTGTGGGCATTTTGGGATGCTATGTGCCTGGAGTCTTCTATGCCTTCTACTGCAACAGTATGCGTGTGGTGCCGCTTTCAGTTCTGGAGGCAGGTGTACCTGCTGACGGTGCTGGCTCTCATCCTGGCCGTGTTCGCGGCTCAGATTCATCCGCTCTACCTCACGCAGCAGTGGAAGAAGCTGCGCTCGGCCATGTTCTGCTCGGTGGCCGGGTACGGCATCATCCCGGCCTGCCACTGGGTCTGGCTCAACGGAGGATTCCACTCCGAAATCGTGAAGGTGTTTTTTCCTCGAGTCATGGTCATGTATCTGATTGCCGCCTCGGCGTTCCTGTTCTACGTCAGTAAGATCCCAGAAAGATACTTTCCAGGCCAGCTGAACTATCTCGGAGCCAGTCATCAGCTCTGGCATGTTCTGGTGGTGGTCATGTTCTACTGGTGGCATCAAACCGCCATCTACATCATGAAGTACAGACACAACCAGCCCTGCACGGACTACAGCAGTCA

Function

symbol description
paqr3b Predicted to enable signaling receptor activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PAQR3 (progestin and adipoQ receptor family member 3).

NR:

description
progestin and adipoQ receptor family member 3-like isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250148.1 True 1820 mRNA 0.47 7 898230 901850
XM_043250149.1 False 1764 mRNA 0.47 7 898241 901850
XM_043250150.1 False 1171 mRNA 0.54 7 898230 901179

Neighbor

gene id symbol gene type direction distance location
antxr2b LOC107597625,LOC107744079,LOC107686426,LOC107685134,LOC107713331,LOC107595564 coding upstream 342 888702 ~ 897888 (+)
rasgef1bb LOC107597626,LOC107595538,LOC107685137,LOC107686427,LOC107713332,LOC107744082 coding upstream 14750 874701 ~ 883480 (+)
snx18b snx18b,LOC107686428,LOC107744084,LOC107685139,LOC107595537,LOC107597629,LOC107713269 coding upstream 50339 844155 ~ 847891 (+)
itga2.2 itga2.2,LOC107686432,LOC107744091,LOC107685142,LOC107713338,LOC107597671 coding upstream 107595 766692 ~ 790635 (+)
LOC122352656 itga2,LOC107713336,LOC107744146,LOC107686486 coding upstream 132561 751480 ~ 765669 (+)
lhx6a lhx6,LOC107597616,LOC107685129,LOC106561716 coding downstream 44153 946003 ~ 958730 (+)
ndufa8 LOC107686420,LOC107597618,LOC107685189,LOC107595579 coding downstream 67857 969707 ~ 971815 (+)
si:ch211-243g18.2 si:ch211-243g18.2,LOC107744167,LOC107686498,LOC107713290,LOC107685187,LOC107597669 coding downstream 99225 1001075 ~ 1010875 (+)
rc3h2 rc3h2,LOC107595546,LOC107685128,LOC107597668,LOC107713325,LOC107686479 coding downstream 116495 1018345 ~ 1040944 (+)
LOC122352732 rabgap1,LOC107744072,LOC107686418,LOC107685165 coding downstream 140189 1042039 ~ 1112174 (+)
G73731 NA non-coding upstream 13743 884253 ~ 884487 (+)
G73727 NA non-coding upstream 42346 855214 ~ 855884 (+)
G73711 NA non-coding upstream 90384 807618 ~ 807846 (+)
G73710 NA non-coding upstream 92565 805370 ~ 805665 (+)
G73656 NA non-coding upstream 102541 795335 ~ 795689 (+)
G73739 NA non-coding downstream 4466 906316 ~ 907653 (+)
G73732 NA non-coding downstream 15946 917796 ~ 919493 (+)
G73763 NA non-coding downstream 214283 1116133 ~ 1116389 (+)
G73760 NA non-coding downstream 215263 1117113 ~ 1126466 (+)
G73766 NA non-coding downstream 238499 1140349 ~ 1140659 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other upstream 96307 796011 ~ 801923 (+)
pmaip1 NA other upstream 123856 683106 ~ 774374 (+)
isl1b NA other upstream 202307 692124 ~ 695923 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other upstream 499371 396440 ~ 398859 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other upstream 611990 242243 ~ 286240 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other downstream 32219 934069 ~ 945860 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 175846 1077696 ~ 1084039 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other downstream 1209346 2111196 ~ 2111694 (+)
G74171 NA other downstream 1292247 2194097 ~ 2200467 (+)
smad2 smad2,LOC107743055,LOC107653131 other downstream 1329572 2231422 ~ 2250897 (+)

Expression


Co-expression Network